CF931514
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF931514 vs. ExPASy Swiss-Prot
Match: PDR1_TOBAC (Pleiotropic drug resistance protein 1 OS=Nicotiana tabacum GN=PDR1 PE=2 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 5.789e-27 Identity = 63/107 (58.88%), Postives = 76/107 (71.03%), Query Frame = 1 Query: 4 SLR-RSASRWNTNSIGAFXXXXXXXXXXXALKWAALEKLPTYNRLRKGILTTSRGEANEVDVYNLGLQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGIDLTKVE 321 SLR S S W N + F ALKWAALEKLPT++RLRKG+L S+G A EVD+ +LG QER+ L+++LVKV D DNE+FLLKLKNRIDRVGIDL +E Sbjct: 21 SLRANSNSIWRNNGVEIFSRSSRDEDDEEALKWAALEKLPTFDRLRKGLLFGSQGAAAEVDINDLGFQERKNLLERLVKVADEDNEKFLLKLKNRIDRVGIDLPTIE 127
BLAST of CF931514 vs. ExPASy Swiss-Prot
Match: TUR2_SPIPO (Pleiotropic drug resistance protein TUR2 OS=Spirodela polyrrhiza GN=TUR2 PE=1 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 1.862e-25 Identity = 60/107 (56.07%), Postives = 73/107 (68.22%), Query Frame = 1 Query: 4 SLRRSASRWNTNSIG-AFXXXXXXXXXXXALKWAALEKLPTYNRLRKGILTTSRGEANEVDVYNLGLQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGIDLTKVE 321 SLRRS S W + S F ALKWAALEKLPTY+RLRKGI+T GE EVD+ LG QER+ L++KLV+ + DNERFLLKL+NR++RVGID +E Sbjct: 18 SLRRSVSAWRSPSTSDVFGRSSREEDDEEALKWAALEKLPTYDRLRKGIMTGDGGEIQEVDIQGLGFQERKNLLEKLVRNAEEDNERFLLKLRNRMERVGIDNPTIE 124
BLAST of CF931514 vs. ExPASy Swiss-Prot
Match: PDR1_NICPL (Pleiotropic drug resistance protein 1 OS=Nicotiana plumbaginifolia GN=PDR1 PE=1 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 1.862e-25 Identity = 60/102 (58.82%), Postives = 70/102 (68.63%), Query Frame = 1 Query: 16 SASRWNTNSIGAFXXXXXXXXXXXALKWAALEKLPTYNRLRKGILTTSRGEANEVDVYNLGLQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGIDLTKVE 321 S S W N F ALKWAALEKLPTY+RLRKGIL S+G A EVDV + G+ ER+ L+++LVKV D DNE+FLLKLKNRIDRVGID +E Sbjct: 30 SNSIWRNNGAEVFSRSARDEDDEEALKWAALEKLPTYDRLRKGILFGSQGAAAEVDVDDSGVLERKNLLERLVKVADEDNEKFLLKLKNRIDRVGIDFPSIE 131
BLAST of CF931514 vs. ExPASy Swiss-Prot
Match: PDR7_ORYSJ (Putative pleiotropic drug resistance protein 7 OS=Oryza sativa subsp. japonica GN=PDR7 PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 3.883e-23 Identity = 58/108 (53.70%), Postives = 74/108 (68.52%), Query Frame = 1 Query: 4 SLRRSASRWNTNS--IGAFXXXXXXXXXXXALKWAALEKLPTYNRLRKGILTTSRGEANEVDVYNLGLQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGIDLTKVE 321 S+RR+AS W S AF ALKWAA+EKLPTY+R+RKGILT G EVD+ LGLQER+ LI++LV+ + DNERFLLKL++R++RVGID +E Sbjct: 15 SVRRTASSWRGTSGRSDAFGRSVREEDDEEALKWAAIEKLPTYDRMRKGILTA--GGVEEVDIGGLGLQERRNLIERLVRTAEEDNERFLLKLRDRMERVGIDNPTIE 120
BLAST of CF931514 vs. ExPASy Swiss-Prot
Match: AB40G_ARATH (ABC transporter G family member 40 OS=Arabidopsis thaliana GN=ABCG40 PE=1 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 1.631e-21 Identity = 54/109 (49.54%), Postives = 74/109 (67.89%), Query Frame = 1 Query: 4 SLRRSASRWNTNS-IGAFXXXXXXXXXXXALKWAALEKLPTYNRLRKGILTTSR--GEANEVDVYNLGLQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGIDLTKVE 321 S+RR++S W +S F AL+WAALEKLPT++RLRKGILT S G NE+D+ LG Q+ ++L+++L+KV D ++E+ L KLK RIDRVGIDL +E Sbjct: 12 SMRRNSSVWKKDSGREIFSRSSREEDDEEALRWAALEKLPTFDRLRKGILTASHAGGPINEIDIQKLGFQDTKKLLERLIKVGDDEHEKLLWKLKKRIDRVGIDLPTIE 120
BLAST of CF931514 vs. ExPASy Swiss-Prot
Match: PDR2_ORYSJ (Probable pleiotropic drug resistance protein 2 OS=Oryza sativa subsp. japonica GN=PDR2 PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 5.802e-19 Identity = 56/120 (46.67%), Postives = 74/120 (61.67%), Query Frame = 1 Query: 1 TSLRRSASRWNTNSIGAFXXXXXXXXXXX------ALKWAALEKLPTYNRLRKGILTTSR-----GEANE--VDVYNLGLQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGIDLTKVE 321 +S R +AS W + G F AL+WAALEKLPTY+R+R+ +L GEA + VDV +LG QER+ L+++LV+V + DNERFLLKLK RIDRVGID+ +E Sbjct: 20 SSSRGAASMWWSADNGVFSRSRASSSGEDGEDDEEALRWAALEKLPTYDRVRRAVLPVVEEGGGGGEAGKKVVDVLSLGPQERRALLERLVRVAEDDNERFLLKLKERIDRVGIDIPTIE 139
BLAST of CF931514 vs. ExPASy Swiss-Prot
Match: PDR4_ORYSJ (Pleiotropic drug resistance protein 4 OS=Oryza sativa subsp. japonica GN=PDR4 PE=2 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 1.293e-18 Identity = 53/115 (46.09%), Postives = 69/115 (60.00%), Query Frame = 1 Query: 4 SLRRSASRWNTNS---IGAFXXXXXXXXXXXALKWAALEKLPTYNRLRKGILTTSR------GEANEVDVYNLGLQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGIDLTKVE 321 SLRR S W + + AL+WAALE+LPTY+R+R+GIL S GE EVDV LG +E + LI++LV+ D D+ERFLLKL+ R+DRVGID +E Sbjct: 10 SLRREGSMWRSGGDVFSRSSSRFQDEDDDEEALRWAALERLPTYDRVRRGILAVSSEDGGAGGEKVEVDVGRLGARESRALIERLVRAADDDHERFLLKLRERMDRVGIDYPTIE 124
BLAST of CF931514 vs. ExPASy Swiss-Prot
Match: PDR1_ORYSJ (Probable pleiotropic drug resistance protein 1 OS=Oryza sativa subsp. japonica GN=PDR1 PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 1.688e-18 Identity = 48/89 (53.93%), Postives = 61/89 (68.54%), Query Frame = 1 Query: 88 ALKWAALEKLPTYNRLRKGILTTSRGEANE-----------VDVYNLGLQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGIDLTKVE 321 AL+WAAL+KLPTY+R+R IL GE E VDV++LG ER+ L+++LV+V D DNERFLLKLK RI RVGID+ +E Sbjct: 56 ALRWAALQKLPTYDRVRAAILPMVEGEGGEAGGGGGGRRVVVDVHSLGPHERRALLERLVRVADDDNERFLLKLKERISRVGIDMPTIE 144
BLAST of CF931514 vs. ExPASy Swiss-Prot
Match: PDR3_ORYSJ (Pleiotropic drug resistance protein 3 OS=Oryza sativa subsp. japonica GN=PDR3 PE=2 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 2.205e-18 Identity = 46/85 (54.12%), Postives = 62/85 (72.94%), Query Frame = 1 Query: 88 ALKWAALEKLPTYNRLRKGILTTSR-------GEANEVDVYNLGLQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGIDLTKVE 321 AL+WAALEKLPTY+R+R+ IL G VDV+ LG +ER+ L+++LV+V D DNE+FLLKLK+R+DRVGID+ +E Sbjct: 46 ALRWAALEKLPTYDRVRRAILPLGGDDGAGDGGGKGVVDVHGLGPRERRALLERLVRVADEDNEKFLLKLKDRVDRVGIDMPTIE 130
BLAST of CF931514 vs. ExPASy Swiss-Prot
Match: PDR3_ORYSI (Pleiotropic drug resistance protein 3 OS=Oryza sativa subsp. indica GN=PDR3 PE=2 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 2.205e-18 Identity = 46/85 (54.12%), Postives = 62/85 (72.94%), Query Frame = 1 Query: 88 ALKWAALEKLPTYNRLRKGILTTSR-------GEANEVDVYNLGLQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGIDLTKVE 321 AL+WAALEKLPTY+R+R+ IL G VDV+ LG +ER+ L+++LV+V D DNE+FLLKLK+R+DRVGID+ +E Sbjct: 46 ALRWAALEKLPTYDRVRRAILPLGGDDGAGDGGGKGVVDVHGLGPRERRALLERLVRVADEDNEKFLLKLKDRVDRVGIDMPTIE 130 The following BLAST results are available for this feature:
BLAST of CF931514 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 22
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Sequences
The
following sequences are available for this feature:
EST sequence >CF931514 ID=CF931514; Name=CF931514; organism=Citrus sinensis; type=EST; length=322bpback to top |