CF931514
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF931514 vs. ExPASy Swiss-Prot
Match: PDR12_ORYSJ (Pleiotropic drug resistance protein 12 OS=Oryza sativa subsp. japonica GN=PDR12 PE=2 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 3.184e-17 Identity = 45/90 (50.00%), Postives = 62/90 (68.89%), Query Frame = 1 Query: 88 ALKWAALEKLPTYNRLRKGILTTSRGEA------------NEVDVYNLGLQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGIDLTKVE 321 AL+WAA+E+LPTY+R+R IL+++ EA EVDV LG+ ERQ I+++ +V + DN+RFL KL+NRIDRVGI+L VE Sbjct: 59 ALRWAAIERLPTYSRMRTAILSSAEEEAAAAAAGAGKQQYKEVDVRRLGVGERQEFIERVFRVAEEDNQRFLQKLRNRIDRVGIELPTVE 148
BLAST of CF931514 vs. ExPASy Swiss-Prot
Match: PDR2_NICPL (Pleiotropic drug resistance protein 2 OS=Nicotiana plumbaginifolia GN=PDR2 PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 1.210e-16 Identity = 40/81 (49.38%), Postives = 62/81 (76.54%), Query Frame = 1 Query: 91 LKWAALEKLPTYNRLRKG----ILTTSRGEANEVDVYNLGLQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGIDLTKVE 321 LKWAA+++LPTYNRLRKG +++ R +EVD+ LG Q+++ L++ ++KV + DNE+FL +L+NR DRVGI++ K+E Sbjct: 58 LKWAAIDRLPTYNRLRKGMMKEVMSNGRVVHHEVDMTKLGNQDKKVLMESILKVVEDDNEQFLRRLRNRTDRVGIEIPKIE 138
BLAST of CF931514 vs. ExPASy Swiss-Prot
Match: AB29G_ARATH (ABC transporter G family member 29 OS=Arabidopsis thaliana GN=ABCG29 PE=2 SV=2) HSP 1 Score: 81.2629 bits (199), Expect = 1.747e-15 Identity = 44/78 (56.41%), Postives = 54/78 (69.23%), Query Frame = 1 Query: 88 ALKWAALEKLPTYNRLRKGILTTSRGEANEVDVYNLGLQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGIDLTKVE 321 ALKWAALEKLPT+ RLR I+ + VDV LG+ +RQ+ ID + KVT+ DNE+FL K +NRIDRV I L VE Sbjct: 39 ALKWAALEKLPTFARLRTTII---HPHEDLVDVTKLGVDDRQKFIDSIFKVTEEDNEKFLKKFRNRIDRVRIKLPTVE 113
BLAST of CF931514 vs. ExPASy Swiss-Prot
Match: AB36G_ARATH (ABC transporter G family member 36 OS=Arabidopsis thaliana GN=ABCG36 PE=1 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 2.980e-15 Identity = 44/86 (51.16%), Postives = 57/86 (66.28%), Query Frame = 1 Query: 88 ALKWAALEKLPTYNRLRKGILTT--------SRGEANEVDVYNLGLQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGIDLTKVE 321 ALKWAA+EKLPTY+RLR ++ ++ + EVDV L ++RQ+ ID + KV + DNER L KL+NRIDRVGI L VE Sbjct: 52 ALKWAAIEKLPTYSRLRTTLMNAVVEDDVYGNQLMSKEVDVTKLDGEDRQKFIDMVFKVAEQDNERILTKLRNRIDRVGIKLPTVE 137
BLAST of CF931514 vs. ExPASy Swiss-Prot
Match: AB35G_ARATH (ABC transporter G family member 35 OS=Arabidopsis thaliana GN=ABCG35 PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 3.892e-15 Identity = 46/87 (52.87%), Postives = 56/87 (64.37%), Query Frame = 1 Query: 88 ALKWAALEKLPTYNRLRKGILTTSRGEAN---------EVDVYNLGLQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGIDLTKVE 321 ALKWA++EKLPTYNRLR ++ GE + VDV L +ERQ+ ID + KV + DNER L KL+NRIDRVGI L VE Sbjct: 50 ALKWASIEKLPTYNRLRTSLMP-ELGEDDVYGNQILNKAVDVTKLDGEERQKFIDMVFKVAEQDNERILTKLRNRIDRVGIQLPTVE 135
BLAST of CF931514 vs. ExPASy Swiss-Prot
Match: AB34G_ARATH (ABC transporter G family member 34 OS=Arabidopsis thaliana GN=ABCG34 PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 6.639e-15 Identity = 40/81 (49.38%), Postives = 60/81 (74.07%), Query Frame = 1 Query: 91 LKWAALEKLPTYNRLRKGIL--TTSRGEAN--EVDVYNLGLQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGIDLTKVE 321 L+WAALE+LPTY+RLRKG+L T G+ +VDV NL +E++ L++ ++K + DNE+FL +L+ R DRVGI++ K+E Sbjct: 59 LRWAALERLPTYDRLRKGMLPQTMVNGKIGLEDVDVTNLAPKEKKHLMEMILKFVEEDNEKFLRRLRERTDRVGIEVPKIE 139
BLAST of CF931514 vs. ExPASy Swiss-Prot
Match: PDR5_ORYSJ (Pleiotropic drug resistance protein 5 OS=Oryza sativa subsp. japonica GN=PDR5 PE=2 SV=2) HSP 1 Score: 78.5666 bits (192), Expect = 1.132e-14 Identity = 40/89 (44.94%), Postives = 61/89 (68.54%), Query Frame = 1 Query: 91 LKWAALEKLPTYNRLRKGILTT------------SRGEANEVDVYNLGLQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGIDLTKVE 321 L+WAALEKLPTY+R+R+GIL S +A+EVD+ NL +E + L++++ K + DNERFL + ++R+D+VGI+L K+E Sbjct: 51 LRWAALEKLPTYDRMRRGILRKAVDGGGDGEGAGSLFKADEVDIANLDPREGRELMERVFKAVEDDNERFLRRFRDRLDQVGIELPKIE 139
BLAST of CF931514 vs. ExPASy Swiss-Prot
Match: AB39G_ARATH (ABC transporter G family member 39 OS=Arabidopsis thaliana GN=ABCG39 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 1.384e-12 Identity = 34/81 (41.98%), Postives = 59/81 (72.84%), Query Frame = 1 Query: 91 LKWAALEKLPTYNRLRKGIL--TTSRG--EANEVDVYNLGLQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGIDLTKVE 321 L+WAA+E+LPT++RLRKG+L T++ G E ++D+ L ++++ L++ ++ + DNE+FL L+ R DRVGI++ K+E Sbjct: 61 LRWAAIERLPTFDRLRKGMLPQTSANGKIELEDIDLTRLEPKDKKHLMEMILSFVEEDNEKFLRDLRERTDRVGIEVPKIE 141
BLAST of CF931514 vs. ExPASy Swiss-Prot
Match: PDR15_ORYSJ (Pleiotropic drug resistance protein 15 OS=Oryza sativa subsp. japonica GN=PDR15 PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 2.361e-12 Identity = 40/94 (42.55%), Postives = 55/94 (58.51%), Query Frame = 1 Query: 88 ALKWAALEKLPTYNRLRKGIL------------TTSRGEA----NEVDVYNLGLQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGIDLTKVE 321 AL+WAALE+LP+++RLR G++ RG EVDV L L +RQ ++++ V + DNERFL KL+ RIDR GI + VE Sbjct: 69 ALRWAALERLPSFDRLRTGLMRADADSSGVGVGAVGRGRRWYAHREVDVRTLELAQRQAFVERVFHVAEEDNERFLKKLRARIDRAGIQMPTVE 162
BLAST of CF931514 vs. ExPASy Swiss-Prot
Match: AB32G_ARATH (ABC transporter G family member 32 OS=Arabidopsis thaliana GN=ABCG32 PE=1 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 4.028e-12 Identity = 31/77 (40.26%), Postives = 50/77 (64.94%), Query Frame = 1 Query: 91 LKWAALEKLPTYNRLRKGILTTSRGEANEVDVYNLGLQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGIDLTKVE 321 L+WAAL++LPTY+R+R+GI GE E+ + NL E++ L+D+LV + D E+F +++ R D V + K+E Sbjct: 25 LRWAALQRLPTYSRIRRGIFRDMVGEPKEIQIGNLEASEQRLLLDRLVNSVENDPEQFFARVRKRFDAVDLKFPKIE 101 The following BLAST results are available for this feature:
BLAST of CF931514 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 22
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Sequences
The
following sequences are available for this feature:
EST sequence >CF931514 ID=CF931514; Name=CF931514; organism=Citrus sinensis; type=EST; length=322bpback to top |