CF931516

Overview
NameCF931516
Unique NameCF931516
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length536
Libraries
Library NameType
Mature peel (flavedo) cDNA subtraction librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF931516 vs. ExPASy Swiss-Prot
Match: HS157_ARATH (15.7 kDa heat shock protein, peroxisomal OS=Arabidopsis thaliana GN=HSP15.7 PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 3.654e-14
Identity = 41/111 (36.94%), Postives = 63/111 (56.76%), Query Frame = 3
Query:  162 VDWKETPEAHVFKADLPGXXXXXXXXXXXXXRVLKISGQRKIEKEDKNDTWYRVERSS-----GAFSRRFRLPENVEVDQIKASIDCGVLTLIIPK-AEAKKSNVRAIQIS 476
            +DW E+  +H+FK ++PG              VL I G+   E++ +N  W+  ER +       F RR  LPENV+VDQ+KA ++ GVLT+++PK   +K S VR + I+
Sbjct:   24 IDWMESNNSHIFKINVPGYNKEDIKVQIEEGNVLSIRGEGIKEEKKENLVWHVAEREAFSGGGSEFLRRIELPENVKVDQVKAYVENGVLTVVVPKDTSSKSSKVRNVNIT 134          
BLAST of CF931516 vs. ExPASy Swiss-Prot
Match: HSP21_SOLPE (17.3 kDa class II heat shock protein OS=Solanum peruvianum PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 8.999e-13
Identity = 43/123 (34.96%), Postives = 61/123 (49.59%), Query Frame = 3
Query:  117 SSQFPQETSAFVNTRVDWKETPEAHVFKADLPGXXXXXXXXXXXXXRVLKISGQRKIEKEDKNDTWYRVERSSGAFSRRFRLPENVEVDQIKASIDCGVLTLII---PKAEAKKSNVRAIQIS 476
            S  + ++  A   T  D KE P ++VF  D+PG              VL ISG+RK E+E +   + R+ER  G F R+F LPEN   D I A    GVLT+ +   P  E KK     ++++
Sbjct:   33 SKIYVRDAKAMAATPADVKEYPNSYVFVVDMPGLKSGDIKVQVEEDNVLLISGERKREEEKEGAKFIRMERRVGKFMRKFSLPENANTDAISAVCQDGVLTVTVQKLPPPEPKKPKTIEVKVA 155          
BLAST of CF931516 vs. ExPASy Swiss-Prot
Match: HSP22_MAIZE (17.8 kDa class II heat shock protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.175e-12
Identity = 40/125 (32.00%), Postives = 66/125 (52.80%), Query Frame = 3
Query:  111 SSSSQFPQETSAFVNTRVDWKETPEAHVFKADLPGXXXXXXXXXXXXXRVLKISGQRKIEKEDKNDTWYRVERSSGAFSRRFRLPENVEVDQIKASIDCGVLTLII---PKAEAKKSNVRAIQIS 476
            S++  + ++  A   T  D KE P A+ F  D+PG             RVL +SG+R+ E+ + +  + R+ER  G F R+F LP+N +VD++ A    GVLT+ +   P  E KK     ++++
Sbjct:   40 SATRTYVRDARAMAATPADVKELPGAYAFVVDMPGLGTGDIRVQVEDERVLVVSGERRREEREDDAKYLRMERRMGKFMRKFVLPDNADVDKVAAVCRDGVLTVTVEKLPPPEPKKPKTIEVKVA 164          
BLAST of CF931516 vs. ExPASy Swiss-Prot
Match: HSP16_ORYSJ (16.0 kDa heat shock protein, peroxisomal OS=Oryza sativa subsp. japonica GN=HSP16.0 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.005e-12
Identity = 41/123 (33.33%), Postives = 60/123 (48.78%), Query Frame = 3
Query:  129 PQETSAFVNTRVDWKETPEAHVFKADLPGXXXXXXXXXXXXXRVLKISGQ------RKIEKEDKNDTWYRVERSSGAFSRRFRLPENVEVDQIKASIDCGVLTLIIPKAEA-KKSNVRAIQIS 476
            P   SA     +DW ETP +HV + ++PG              VL + G        K  + +K+  W+  ER    F+R   LP  V V+QI+AS+D GVLT+++PK  A  +   R I +S
Sbjct:   21 PDWASASATAAMDWVETPTSHVLRINVPGLGKDDVKVQVEDGNVLTVRGAAPHAAAEKEREREKDVVWHVAERGRPEFAREVALPAEVRVEQIRASVDNGVLTVVVPKEPAPARPRTRPIAVS 143          
BLAST of CF931516 vs. ExPASy Swiss-Prot
Match: HSP21_HELAN (17.9 kDa class II heat shock protein OS=Helianthus annuus GN=HSP17.9 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 5.833e-12
Identity = 41/123 (33.33%), Postives = 61/123 (49.59%), Query Frame = 3
Query:  117 SSQFPQETSAFVNTRVDWKETPEAHVFKADLPGXXXXXXXXXXXXXRVLKISGQRKIEKEDKNDTWYRVERSSGAFSRRFRLPENVEVDQIKASIDCGVLTLII---PKAEAKKSNVRAIQIS 476
            S  + ++  A   T  D KE P ++VF  D+PG              VL ISG+R  E+E +   + R+ER  G F ++F LPE+   D+I A    GVLT+ +   P  E KK     +Q++
Sbjct:   38 SRAYVRDARAMAATPADVKECPNSYVFIVDMPGLKSGDIKVQVERDNVLVISGKRNREEEKEGVKYVRMERRMGKFMKKFALPEDANTDKISAICQDGVLTVTVEKLPPPEPKKPKTIQVQVA 160          
BLAST of CF931516 vs. ExPASy Swiss-Prot
Match: HS177_ARATH (17.7 kDa class II heat shock protein OS=Arabidopsis thaliana GN=HSP17.7 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 5.833e-12
Identity = 41/124 (33.06%), Postives = 68/124 (54.84%), Query Frame = 3
Query:  117 SSQFPQETSAFVNTRVDWKETPEAHVFKADLPGXXXXXXXXXXXXXRVLKISGQRKIE-KEDKNDTWYRVERSSGAFSRRFRLPENVEVDQIKASIDCGVLTLIIPK---AEAKKSNVRAIQIS 476
            S  + ++  A   T  D  E P+A+VF  D+PG              VL +SG+R+ + KE++   + R+ER  G F R+F+LP+N ++++I A+ + GVL + IPK    E KK     +Q++
Sbjct:   33 SRAYMRDAKAMAATPADVIEHPDAYVFAVDMPGIKGDEIQVQIENENVLVVSGKRQRDNKENEGVKFVRMERRMGKFMRKFQLPDNADLEKISAACNDGVLKVTIPKLPPPEPKKPKTIQVQVA 156          
BLAST of CF931516 vs. ExPASy Swiss-Prot
Match: HSP21_IPONI (17.2 kDa class II heat shock protein OS=Ipomoea nil GN=SHSP-1 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 9.950e-12
Identity = 49/132 (37.12%), Postives = 63/132 (47.73%), Query Frame = 3
Query:  105 DFSSSSQFPQET-----SAFVNTRVDWKETPEAHVFKADLPGXXXXXXXXXXXXXRVLKISGQRKIEKEDKNDTWY-RVERSSGAFSRRFRLPENVEVDQIKASIDCGVLTLI---IPKAEAKKSNVRAIQI 473
            D SS+S  P  T      A   T  D KE P ++VF  D+PG              VL ISG+RK E E+K    Y R+ER  G   R+F LPEN   ++I A    GVLT+    +P  E KK     ++I
Sbjct:   23 DKSSNSSAPSRTFMLDAKAMAATPADVKEYPNSYVFIIDMPGLKSGDIKVQVDGDNVLSISGERKREAEEKEGAKYVRMERRVGKLMRKFVLPENANKEKITAVCQDGVLTVTVENVPPPEPKKPRTIEVKI 154          
BLAST of CF931516 vs. ExPASy Swiss-Prot
Match: HSP21_PEA (17.1 kDa class II heat shock protein OS=Pisum sativum GN=HSP17.7 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 2.895e-11
Identity = 39/120 (32.50%), Postives = 60/120 (50.00%), Query Frame = 3
Query:  126 FPQETSAFVNTRVDWKETPEAHVFKADLPGXXXXXXXXXXXXXRVLKISGQRKIEKEDKNDTWYRVERSSGAFSRRFRLPENVEVDQIKASIDCGVLTLII---PKAEAKKSNVRAIQIS 476
            + ++  A   T  D KE P ++VF  D+PG              VL ISG+RK E+E +   + ++ER  G   R+F LPEN  ++ I A    GVLT+ +   P  E KK     ++++
Sbjct:   33 YVRDAKAMAATPADVKEHPNSYVFMVDMPGVKSGDIKVQVEDENVLLISGERKREEEKEGVKYLKMERRIGKLMRKFVLPENANIEAISAISQDGVLTVTVNKLPPPEPKKPKTIQVKVA 152          
BLAST of CF931516 vs. ExPASy Swiss-Prot
Match: HSP21_MAIZE (17.5 kDa class II heat shock protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 4.938e-11
Identity = 42/118 (35.59%), Postives = 62/118 (52.54%), Query Frame = 3
Query:  135 ETSAFVNTRVDWKETPEAHVFKADLPGXXXXXXXXXXXXXRVLKISGQRKIEKEDKNDTWY-RVERSSGAFSRRFRLPENVEVDQIKASIDCGVLTLII---PKAEAKKSNVRAIQIS 476
            +  A   T  D KE P A+ F  D+PG             RVL ISG+R+  +E++ D  Y R+ER  G F R+F LP+N ++D+I A    GVLT+ +   P  E KK     ++++
Sbjct:   46 DARAMAVTPADVKELPGAYAFVVDMPGLGTGDIKVQVEDERVLVISGERR--REEREDAKYLRMERRMGKFMRKFVLPDNADMDKISAVCRDGVLTVTVEKLPPPEPKKPKTIEVKVA 161          
BLAST of CF931516 vs. ExPASy Swiss-Prot
Match: HS176_ARATH (17.6 kDa class II heat shock protein OS=Arabidopsis thaliana GN=HSP17.6 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 4.938e-11
Identity = 41/124 (33.06%), Postives = 63/124 (50.81%), Query Frame = 3
Query:  117 SSQFPQETSAFVNTRVDWKETPEAHVFKADLPGXXXXXXXXXXXXXRVLKISGQRKIE-KEDKNDTWYRVERSSGAFSRRFRLPENVEVDQIKASIDCGVLTLII---PKAEAKKSNVRAIQIS 476
            S  + ++  A   T  D  E P A+ F  D+PG              VL +SG+R+ E KE++   + R+ER  G F R+F+LPEN ++D+I A    GVL + +   P  E KK     +Q++
Sbjct:   32 SRVYMRDAKAMAATPADVIEHPNAYAFVVDMPGIKGDEIKVQVENDNVLVVSGERQRENKENEGVKYVRMERRMGKFMRKFQLPENADLDKISAVCHDGVLKVTVQKLPPPEPKKPKTIQVQVA 155          
The following BLAST results are available for this feature:
BLAST of CF931516 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 50
Match NameE-valueIdentityDescription
HS157_ARATH3.654e-1436.9415.7 kDa heat shock protein, peroxisomal OS=Arabid... [more]
HSP21_SOLPE8.999e-1334.9617.3 kDa class II heat shock protein OS=Solanum pe... [more]
HSP22_MAIZE1.175e-1232.0017.8 kDa class II heat shock protein OS=Zea mays P... [more]
HSP16_ORYSJ2.005e-1233.3316.0 kDa heat shock protein, peroxisomal OS=Oryza ... [more]
HSP21_HELAN5.833e-1233.3317.9 kDa class II heat shock protein OS=Helianthus... [more]
HS177_ARATH5.833e-1233.0617.7 kDa class II heat shock protein OS=Arabidopsi... [more]
HSP21_IPONI9.950e-1237.1217.2 kDa class II heat shock protein OS=Ipomoea ni... [more]
HSP21_PEA2.895e-1132.5017.1 kDa class II heat shock protein OS=Pisum sati... [more]
HSP21_MAIZE4.938e-1135.5917.5 kDa class II heat shock protein OS=Zea mays P... [more]
HS176_ARATH4.938e-1133.0617.6 kDa class II heat shock protein OS=Arabidopsi... [more]

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Properties
Property NameValue
Genbank descriptionEST0591 Mature peel (flavedo) cDNA subtraction library Citrus sinensis cDNA clone 6P231 similar to class I small heat shock protein (acc# P02519), mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF931516 ID=CF931516; Name=CF931516; organism=Citrus sinensis; type=EST; length=536bp
GTGGGTTGTCAGCTTCTAAATTCTAATCGAAAATGTCGATGATTCCAAGC
TTCTTCGGGAACCGCCGCAGCAGTGTCTTCGATCCATTCTCTCTTGACGT
CTGGGATTTCTCTTCCTCATCTCAGTTCCCGCAAGAGACCTCGGCTTTCG
TCAACACCCGCGTCGACTGGAAGGAAACCCCGGAAGCCCACGTGTTCAAG
GCCGATCTGCCGGGGGTGAAGAAAGAGGAAGTGAAGGTCGAGGTCGACGA
TGACAGGGTGCTTAAGATAAGCGGGCAGAGGAAGATCGAGAAGGAAGACA
AGAACGACACGTGGTATCGCGTGGAGCGCAGCAGTGGAGCGTTCTCGCGG
AGATTCAGGCTACCGGAGAATGTGGAGGTGGACCAGATTAAGGCCTCAAT
AGACTGTGGTGTGCTCACTCTTATCATTCCTAAAGCGGAGGCCAAGAAAT
CCAATGTCAGGGCTATTCAAATTTCTGGCTGAATTCTCCTCTCTCCTGAT
AATAAGGCTTTGTTTGTTAATAATGATAATAAGGTC
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