CF931524

Overview
NameCF931524
Unique NameCF931524
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length284
Libraries
Library NameType
Mature peel (flavedo) cDNA subtraction librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13032 contig Csv1_Contig13032:121..406. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF931524 vs. ExPASy Swiss-Prot
Match: SRK2J_ARATH (Serine/threonine-protein kinase SRK2J OS=Arabidopsis thaliana GN=SRK2J PE=1 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 1.383e-41
Identity = 80/93 (86.02%), Postives = 82/93 (88.17%), Query Frame = 3
Query:    3 ENTLLDGSAAPRLKICDFGYSKSSVLHSRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQDDPKNFMKTIQKIMAV 281
            ENTLLDGS APRLKICDFGYSKSSVLHS PKSTVGTPAYIAPEV  R EYDGK  DVWSCGV LYVMLVGAYPFED  DP+NF KT+QKIMAV
Sbjct:  127 ENTLLDGSPAPRLKICDFGYSKSSVLHSNPKSTVGTPAYIAPEVFCRSEYDGKSVDVWSCGVALYVMLVGAYPFEDPKDPRNFRKTVQKIMAV 219          
BLAST of CF931524 vs. ExPASy Swiss-Prot
Match: SRK2C_ARATH (Serine/threonine-protein kinase SRK2C OS=Arabidopsis thaliana GN=SRK2C PE=1 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 8.967e-41
Identity = 77/94 (81.91%), Postives = 85/94 (90.43%), Query Frame = 3
Query:    3 ENTLLDGSAAPRLKICDFGYSKSSVLHSRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQDDPKNFMKTIQKIMAVQ 284
            ENTLLDGS APR+KICDFGYSKS VLHS+PK+TVGTPAYIAPEVLS +EYDGK+ADVWSCGVTLYVMLVGAYPFED  DPK+F KTI +I+  Q
Sbjct:  127 ENTLLDGSEAPRVKICDFGYSKSGVLHSQPKTTVGTPAYIAPEVLSTKEYDGKIADVWSCGVTLYVMLVGAYPFEDPSDPKDFRKTIGRILKAQ 220          
BLAST of CF931524 vs. ExPASy Swiss-Prot
Match: SRK2F_ARATH (Serine/threonine-protein kinase SRK2F OS=Arabidopsis thaliana GN=SRK2F PE=1 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 3.407e-40
Identity = 75/93 (80.65%), Postives = 86/93 (92.47%), Query Frame = 3
Query:    3 ENTLLDGSAAPRLKICDFGYSKSSVLHSRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQDDPKNFMKTIQKIMAV 281
            ENTLLDGS +  LKICDFGYSKSSVLHS+PKSTVGTPAY+APEVLSR+EY+GK+ADVWSCGVTLYVMLVGAYPFED +DP+N   TIQ+I++V
Sbjct:  127 ENTLLDGSPSSHLKICDFGYSKSSVLHSQPKSTVGTPAYVAPEVLSRKEYNGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNIRNTIQRILSV 219          
BLAST of CF931524 vs. ExPASy Swiss-Prot
Match: CIPKR_ORYSJ (Putative CBL-interacting protein kinase 27 OS=Oryza sativa subsp. japonica GN=CIPK27 PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 9.983e-16
Identity = 44/82 (53.66%), Postives = 54/82 (65.85%), Query Frame = 3
Query:    3 ENTLLDGSAAPRLKICDFGYSKSSVLHSRPKSTV----GTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQD 236
            EN LLD   A  LK+ DFG S +   H+RP   +    GTPAY+APEVL+   YDG  AD+WSCGV LYV+L GA PF+D +
Sbjct:  138 ENLLLD--EAGNLKVADFGLS-ALACHARPDGLLHTACGTPAYVAPEVLAGNGYDGAKADLWSCGVILYVLLAGALPFQDDN 216          
BLAST of CF931524 vs. ExPASy Swiss-Prot
Match: CIPK2_ORYSJ (CBL-interacting protein kinase 2 OS=Oryza sativa subsp. japonica GN=CIPK2 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 9.983e-16
Identity = 47/97 (48.45%), Postives = 60/97 (61.86%), Query Frame = 3
Query:    3 ENTLLDGSAAPRLKICDFGYS-------KSSVLHSRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQDDPKNFMKTIQKI 272
            EN LLD ++   LK+ DFG S       +  +LH+    T GTPAY+APEV++RR YDG  AD+WSCGV L+V+L G  PF D    KN M   +KI
Sbjct:  139 ENLLLDENS--NLKVSDFGLSALADCKRQDGLLHT----TCGTPAYVAPEVINRRGYDGAKADIWSCGVILFVLLAGYLPFHD----KNLMDMYKKI 225          
BLAST of CF931524 vs. ExPASy Swiss-Prot
Match: CIPKL_ORYSJ (CBL-interacting protein kinase 21 OS=Oryza sativa subsp. japonica GN=CIPK21 PE=2 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 1.304e-15
Identity = 45/95 (47.37%), Postives = 58/95 (61.05%), Query Frame = 3
Query:    3 ENTLLDGSAAPRLKICDFGYS-------KSSVLHSRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQDDPKNFMKTIQ 266
            EN L+D  A   +K+ DFG S       K  +LH+    T G+P YIAPEVL  R YDG L+D+WSCGV LYVML G  PF+DQ+    + K ++
Sbjct:  214 ENVLVD--AKGNIKVSDFGLSALPQNQRKDGLLHT----TCGSPNYIAPEVLLNRGYDGSLSDIWSCGVILYVMLTGNLPFDDQNTVVLYQKILK 302          
BLAST of CF931524 vs. ExPASy Swiss-Prot
Match: CIPKA_ORYSJ (CBL-interacting protein kinase 10 OS=Oryza sativa subsp. japonica GN=CIPK10 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 2.905e-15
Identity = 47/97 (48.45%), Postives = 60/97 (61.86%), Query Frame = 3
Query:    3 ENTLLDGSAAPRLKICDFGYS-------KSSVLHSRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQDDPKNFMKTIQKI 272
            EN LLD +    LKI DFG S       +  +LH+    T GTPAY+APEV++R+ YDG  ADVW+CGV LYV+L G  PF+D    KN +   +KI
Sbjct:  139 ENLLLDENR--NLKISDFGLSALAECKRQDGLLHT----TCGTPAYVAPEVINRKGYDGAKADVWACGVILYVLLAGYLPFQD----KNVINMYKKI 225          
BLAST of CF931524 vs. ExPASy Swiss-Prot
Match: CIPK5_ARATH (CBL-interacting serine/threonine-protein kinase 5 OS=Arabidopsis thaliana GN=CIPK5 PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 2.905e-15
Identity = 46/97 (47.42%), Postives = 59/97 (60.82%), Query Frame = 3
Query:    3 ENTLLDGSAAPRLKICDFGYS-------KSSVLHSRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQDDPKNFMKTIQKI 272
            EN LLD +    LKI DFG S       +  +LH++     GTPAY+APEVL ++ YDG  AD+WSCGV LYV+L G  PF+D+    N M   +KI
Sbjct:  139 ENLLLDENGD--LKISDFGLSALPEQILQDGLLHTQ----CGTPAYVAPEVLKKKGYDGAKADIWSCGVVLYVLLAGCLPFQDE----NLMNMYRKI 225          
BLAST of CF931524 vs. ExPASy Swiss-Prot
Match: CIPKO_ORYSJ (CBL-interacting protein kinase 24 OS=Oryza sativa subsp. japonica GN=CIPK24 PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 3.794e-15
Identity = 45/90 (50.00%), Postives = 54/90 (60.00%), Query Frame = 3
Query:    3 ENTLLDGSAAPRLKICDFGYSKSS-----VLHSRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQDDPKNFMK 257
            EN LLD      LK+ DFG S  +     +LH+    T GTP Y+APEVLS   YDG  ADVWSCGV LYV++ G  PFE+ D P  + K
Sbjct:  145 ENLLLDSRG--NLKVSDFGLSTLAQKGVGLLHT----TCGTPNYVAPEVLSNNGYDGSAADVWSCGVILYVLMAGYLPFEEDDLPTLYDK 228          
BLAST of CF931524 vs. ExPASy Swiss-Prot
Match: CIPKG_ORYSJ (CBL-interacting protein kinase 16 OS=Oryza sativa subsp. japonica GN=CIPK16 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 3.794e-15
Identity = 46/101 (45.54%), Postives = 60/101 (59.41%), Query Frame = 3
Query:    3 ENTLLDGSAAPRLKICDFGYS-------KSSVLHSRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQDDPKNFMKTIQKIMAVQ 284
            EN LLD     RLK+ DFG +       +  +LH++     GTPAY+APEVL +R YDG  AD+WSCGV LYV+L G  PF+ +    N+ K  QKI   +
Sbjct:  149 ENLLLDEEG--RLKVTDFGLAALPEQLRQDGLLHTQ----CGTPAYVAPEVLRKRGYDGARADLWSCGVVLYVLLCGFLPFQHE----NYAKMYQKIFKAE 239          
The following BLAST results are available for this feature:
BLAST of CF931524 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
SRK2J_ARATH1.383e-4186.02Serine/threonine-protein kinase SRK2J OS=Arabidops... [more]
SRK2C_ARATH8.967e-4181.91Serine/threonine-protein kinase SRK2C OS=Arabidops... [more]
SRK2F_ARATH3.407e-4080.65Serine/threonine-protein kinase SRK2F OS=Arabidops... [more]
CIPKR_ORYSJ9.983e-1653.66Putative CBL-interacting protein kinase 27 OS=Oryz... [more]
CIPK2_ORYSJ9.983e-1648.45CBL-interacting protein kinase 2 OS=Oryza sativa s... [more]
CIPKL_ORYSJ1.304e-1547.37CBL-interacting protein kinase 21 OS=Oryza sativa ... [more]
CIPKA_ORYSJ2.905e-1548.45CBL-interacting protein kinase 10 OS=Oryza sativa ... [more]
CIPK5_ARATH2.905e-1547.42CBL-interacting serine/threonine-protein kinase 5 ... [more]
CIPKO_ORYSJ3.794e-1550.00CBL-interacting protein kinase 24 OS=Oryza sativa ... [more]
CIPKG_ORYSJ3.794e-1545.54CBL-interacting protein kinase 16 OS=Oryza sativa ... [more]

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Properties
Property NameValue
Genbank descriptionEST0603 Mature peel (flavedo) cDNA subtraction library Citrus sinensis cDNA clone 6P295 similar to serine/threonine protein kinase (acc# S60611), mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF931524 ID=CF931524; Name=CF931524; organism=Citrus sinensis; type=EST; length=284bp
TGGAAAATACCCTATTAGATGGAAGTGCTGCCCCACGCCTGAAAATATGT
GACTTTGGTTACTCTAAGTCATCTGTATTGCATTCAAGACCCAAATCAAC
AGTTGGAACTCCGGCTTATATAGCACCAGAAGTTCTTTCTCGGAGAGAAT
ATGATGGAAAATTAGCAGATGTATGGTCATGTGGGGTCACTCTCTATGTT
ATGCTAGTTGGTGCATACCCTTTTGAAGACCAAGATGACCCTAAAAATTT
CATGAAAACAATTCAGAAAATAATGGCAGTTCAG
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