CF931524

Overview
NameCF931524
Unique NameCF931524
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length284
Libraries
Library NameType
Mature peel (flavedo) cDNA subtraction librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13032 contig Csv1_Contig13032:121..406. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF931524 vs. ExPASy Swiss-Prot
Match: CIPKX_ORYSJ (CBL-interacting protein kinase 33 OS=Oryza sativa subsp. japonica GN=CIPK33 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 7.155e-14
Identity = 46/97 (47.42%), Postives = 56/97 (57.73%), Query Frame = 3
Query:    3 ENTLLDGSAAPRLKICDFGYSKSS-------VLHSRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQDDPKNFMKTIQKI 272
            EN LLD      LK+ DFG S  S       +LH+    T GTP Y+APEVL  + YDG +AD+WSCGV L+V+L G  PFED     N M   +KI
Sbjct:  140 ENLLLDSYG--NLKVSDFGLSALSQQIKDDGLLHT----TCGTPNYVAPEVLEDQGYDGAMADLWSCGVILFVLLAGYLPFED----SNLMTLYKKI 226          
BLAST of CF931524 vs. ExPASy Swiss-Prot
Match: CIPKW_ORYSJ (CBL-interacting protein kinase 32 OS=Oryza sativa subsp. japonica GN=CIPK32 PE=2 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 7.155e-14
Identity = 46/97 (47.42%), Postives = 56/97 (57.73%), Query Frame = 3
Query:    3 ENTLLDGSAAPRLKICDFGYSKSS-------VLHSRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQDDPKNFMKTIQKI 272
            EN LLD      LK+ DFG S  S       +LH+    T GTP Y+APEVL  + YDG +AD+WSCGV L+V+L G  PFED     N M   +KI
Sbjct:  140 ENLLLDSYG--NLKVSDFGLSALSQQIKDDGLLHT----TCGTPNYVAPEVLEDQGYDGAMADLWSCGVILFVLLAGYLPFED----SNLMTLYKKI 226          
BLAST of CF931524 vs. ExPASy Swiss-Prot
Match: CIPKG_ARATH (CBL-interacting serine/threonine-protein kinase 16 OS=Arabidopsis thaliana GN=CIPK16 PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 7.155e-14
Identity = 41/92 (44.57%), Postives = 52/92 (56.52%), Query Frame = 3
Query:    3 ENTLLDGSAAPRLKICDFGYS--------------KSSVLHSRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQD 236
            EN LLDG     LK+ DFG S                 +LH+R     GTPAY+APEVL  + YDG +AD+WSCG+ LY +L G  PF D++
Sbjct:  143 ENLLLDGEGD--LKVTDFGLSALMMPEGLGGRRGSSDDLLHTR----CGTPAYVAPEVLRNKGYDGAMADIWSCGIVLYALLAGFLPFIDEN 228          
BLAST of CF931524 vs. ExPASy Swiss-Prot
Match: SNF1_SCHPO (SNF1-like protein kinase ssp2 OS=Schizosaccharomyces pombe GN=ssp2 PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 9.344e-14
Identity = 40/85 (47.06%), Postives = 52/85 (61.18%), Query Frame = 3
Query:    3 ENTLLDGSAAPRLKICDFGYSKSSVLHSRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQDDPKNFMK 257
            EN LLD +    +KI DFG S      +  K++ G+P Y APEV++ + Y G   DVWSCG+ LYVMLVG  PF+D+  P  F K
Sbjct:  160 ENLLLDDNL--NVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKK 242          
BLAST of CF931524 vs. ExPASy Swiss-Prot
Match: CIPKH_ARATH (CBL-interacting serine/threonine-protein kinase 17 OS=Arabidopsis thaliana GN=CIPK17 PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 9.344e-14
Identity = 40/83 (48.19%), Postives = 51/83 (61.45%), Query Frame = 3
Query:    3 ENTLLDGSAAPRLKICDFG-------YSKSSVLHSRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFED 230
            EN LLD  A   +KI DFG       Y +  +LH+    T G+P Y+APEVL+   YDG  +D+WSCGV LYV+L G  PF+D
Sbjct:  138 ENVLLD--AKGHIKITDFGLSALSQHYREDGLLHT----TCGSPNYVAPEVLANEGYDGAASDIWSCGVILYVILTGCLPFDD 214          
BLAST of CF931524 vs. ExPASy Swiss-Prot
Match: DKF1_CAEEL (Serine/threonine-protein kinase dkf-1 OS=Caenorhabditis elegans GN=dkf-1 PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 1.220e-13
Identity = 39/81 (48.15%), Postives = 52/81 (64.20%), Query Frame = 3
Query:    3 ENTLLD--GSAAPRLKICDFGYSKSSVLHSRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQDD 239
            EN LL   GS  P+ KICDFGY++        K+ VGTPAY+ PEVL R+ Y+ K  D+WS GV +YV L G +PF + ++
Sbjct:  555 ENVLLSDMGSNFPQTKICDFGYARFIPESQFRKTVVGTPAYLPPEVLQRKGYN-KSLDMWSVGVIIYVTLSGTFPFNEGEE 634          
BLAST of CF931524 vs. ExPASy Swiss-Prot
Match: DKF1_CAEBR (Serine/threonine-protein kinase dkf-1 OS=Caenorhabditis briggsae GN=dkf-1 PE=3 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 1.220e-13
Identity = 39/81 (48.15%), Postives = 52/81 (64.20%), Query Frame = 3
Query:    3 ENTLLD--GSAAPRLKICDFGYSKSSVLHSRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQDD 239
            EN LL   GS  P+ KICDFGY++        K+ VGTPAY+ PEVL R+ Y+ K  D+WS GV +YV L G +PF + ++
Sbjct:  593 ENVLLSDMGSNFPQTKICDFGYARFIPESQFRKTVVGTPAYLPPEVLQRKGYN-KSLDMWSVGVIIYVTLSGTFPFNEGEE 672          
BLAST of CF931524 vs. ExPASy Swiss-Prot
Match: CIPK6_ARATH (CBL-interacting serine/threonine-protein kinase 6 OS=Arabidopsis thaliana GN=CIPK6 PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 1.220e-13
Identity = 40/85 (47.06%), Postives = 53/85 (62.35%), Query Frame = 3
Query:    3 ENTLLDGSAAPRLKICDFGYS-------KSSVLHSRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQD 236
            EN LLD      LK+ DFG S       +  +LH+    T GTPAY+APEV+ ++ YDG  AD+WSCGV L+V+L G  PF+D +
Sbjct:  150 ENLLLDEEG--NLKVTDFGLSAFTEHLKQDGLLHT----TCGTPAYVAPEVILKKGYDGAKADLWSCGVILFVLLAGYLPFQDDN 228          
BLAST of CF931524 vs. ExPASy Swiss-Prot
Match: CIPK4_ORYSJ (CBL-interacting protein kinase 4 OS=Oryza sativa subsp. japonica GN=CIPK4 PE=2 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 1.220e-13
Identity = 40/81 (49.38%), Postives = 48/81 (59.26%), Query Frame = 3
Query:    3 ENTLLDGSAAPRLKICDFGYSKSSVL---HSRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQD 236
            +N LLDG     LK+ DFG +          R  +  GTPAY APEVL RR YDG  AD WSCGV L+V+L G  PF+D +
Sbjct:  155 QNVLLDGDG--NLKVSDFGLAALPDTLRDDGRLHTACGTPAYAAPEVLRRRAYDGAKADAWSCGVILFVLLAGHLPFDDSN 233          
BLAST of CF931524 vs. ExPASy Swiss-Prot
Match: CIPKU_ORYSJ (CBL-interacting protein kinase 30 OS=Oryza sativa subsp. japonica GN=CIPK30 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 1.594e-13
Identity = 42/83 (50.60%), Postives = 51/83 (61.45%), Query Frame = 3
Query:    3 ENTLLDGSAAPRLKICDFGYSK-------SSVLHSRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFED 230
            EN LLD  A   LK+ DFG S          +LH+    T GTPAY+APEVL +R YDG  AD+WSCGV L+V+L G  PF +
Sbjct:  144 ENLLLD--ARGDLKVTDFGLSALDGGLRGDGLLHT----TCGTPAYVAPEVLLKRGYDGAKADIWSCGVILFVLLAGYLPFNE 220          
The following BLAST results are available for this feature:
BLAST of CF931524 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
CIPKX_ORYSJ7.155e-1447.42CBL-interacting protein kinase 33 OS=Oryza sativa ... [more]
CIPKW_ORYSJ7.155e-1447.42CBL-interacting protein kinase 32 OS=Oryza sativa ... [more]
CIPKG_ARATH7.155e-1444.57CBL-interacting serine/threonine-protein kinase 16... [more]
SNF1_SCHPO9.344e-1447.06SNF1-like protein kinase ssp2 OS=Schizosaccharomyc... [more]
CIPKH_ARATH9.344e-1448.19CBL-interacting serine/threonine-protein kinase 17... [more]
DKF1_CAEEL1.220e-1348.15Serine/threonine-protein kinase dkf-1 OS=Caenorhab... [more]
DKF1_CAEBR1.220e-1348.15Serine/threonine-protein kinase dkf-1 OS=Caenorhab... [more]
CIPK6_ARATH1.220e-1347.06CBL-interacting serine/threonine-protein kinase 6 ... [more]
CIPK4_ORYSJ1.220e-1349.38CBL-interacting protein kinase 4 OS=Oryza sativa s... [more]
CIPKU_ORYSJ1.594e-1350.60CBL-interacting protein kinase 30 OS=Oryza sativa ... [more]

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Properties
Property NameValue
Genbank descriptionEST0603 Mature peel (flavedo) cDNA subtraction library Citrus sinensis cDNA clone 6P295 similar to serine/threonine protein kinase (acc# S60611), mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF931524 ID=CF931524; Name=CF931524; organism=Citrus sinensis; type=EST; length=284bp
TGGAAAATACCCTATTAGATGGAAGTGCTGCCCCACGCCTGAAAATATGT
GACTTTGGTTACTCTAAGTCATCTGTATTGCATTCAAGACCCAAATCAAC
AGTTGGAACTCCGGCTTATATAGCACCAGAAGTTCTTTCTCGGAGAGAAT
ATGATGGAAAATTAGCAGATGTATGGTCATGTGGGGTCACTCTCTATGTT
ATGCTAGTTGGTGCATACCCTTTTGAAGACCAAGATGACCCTAAAAATTT
CATGAAAACAATTCAGAAAATAATGGCAGTTCAG
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