CF931524

Overview
NameCF931524
Unique NameCF931524
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length284
Libraries
Library NameType
Mature peel (flavedo) cDNA subtraction librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13032 contig Csv1_Contig13032:121..406. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF931524 vs. ExPASy Swiss-Prot
Match: Y7165_DICDI (Probable serine/threonine-protein kinase DDB_G0277165 OS=Dictyostelium discoideum GN=DDB_G0277165 PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 4.637e-13
Identity = 39/82 (47.56%), Postives = 52/82 (63.41%), Query Frame = 3
Query:    3 ENTLLDGSAAPRLKICDFGYS----KSSVLHSRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQD 236
            EN LL G    R+KI DFG      K  +LH+    + G+P Y +PEV+S  +YDG+ ADVWSCGV LY +L G  PF+D++
Sbjct:  137 ENLLLSGDK--RIKIADFGMGSIVRKDMLLHT----SCGSPHYASPEVVSGIDYDGQKADVWSCGVILYALLTGKLPFDDEN 212          
BLAST of CF931524 vs. ExPASy Swiss-Prot
Match: KPCD3_HUMAN (Serine/threonine-protein kinase D3 OS=Homo sapiens GN=PRKD3 PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 4.637e-13
Identity = 37/80 (46.25%), Postives = 53/80 (66.25%), Query Frame = 3
Query:    3 ENTLLDGSAA-PRLKICDFGYSKSSVLHSRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQDD 239
            EN LL  +   P++K+CDFG+++     S  +S VGTPAY+APEVL  + Y+  L D+WS GV +YV L G +PF + +D
Sbjct:  703 ENVLLASAEPFPQVKLCDFGFARIIGEKSFRRSVVGTPAYLAPEVLRSKGYNRSL-DMWSVGVIIYVSLSGTFPFNEDED 781          
BLAST of CF931524 vs. ExPASy Swiss-Prot
Match: CIPKS_ORYSJ (CBL-interacting protein kinase 28 OS=Oryza sativa subsp. japonica GN=CIPK28 PE=2 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 4.637e-13
Identity = 43/97 (44.33%), Postives = 57/97 (58.76%), Query Frame = 3
Query:    3 ENTLLDGSAAPRLKICDFGYS-------KSSVLHSRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQDDPKNFMKTIQKI 272
            EN LLD +    LK+ DFG S       +  +LH+      GTPAY+APEVLSR+ Y G  ADVWSCGV L+V++    PF D    +N ++  +KI
Sbjct:  137 ENLLLDENET--LKVSDFGLSALAESRRQDGLLHT----ACGTPAYVAPEVLSRKGYSGSKADVWSCGVILFVLVANYLPFHD----RNIIQMYRKI 223          
BLAST of CF931524 vs. ExPASy Swiss-Prot
Match: CIPKP_ORYSJ (CBL-interacting protein kinase 25 OS=Oryza sativa subsp. japonica GN=CIPK25 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 4.637e-13
Identity = 37/80 (46.25%), Postives = 49/80 (61.25%), Query Frame = 3
Query:    3 ENTLLDGSAAPRLKICDFGYSKSSVLHSRP---KSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQ 233
            +N L+D      LK+ DFG S  + +  R    ++  GTP ++APEV  RR YDG  ADVW+CGV LYV+L G  PF D+
Sbjct:  153 DNLLVDEQG--NLKVADFGLSALADMERREAHLQTVCGTPLFLAPEVFKRRGYDGAKADVWACGVVLYVLLTGRKPFPDE 230          
BLAST of CF931524 vs. ExPASy Swiss-Prot
Match: CIPKJ_ARATH (CBL-interacting serine/threonine-protein kinase 19 OS=Arabidopsis thaliana GN=CIPK19 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 4.637e-13
Identity = 42/93 (45.16%), Postives = 55/93 (59.14%), Query Frame = 3
Query:    3 ENTLLDGSAAPRLKICDFGYSKSSVLHSRP---KSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQDDPKNFMKTIQKI 272
            EN LLD +    LK+ DFG S  S    +     +  GTPAY+APEVL+R+ YDG   D+WSCGV L+V++ G  PF D    +N M   +KI
Sbjct:  154 ENLLLDENG--NLKVSDFGLSAVSDQIRQDGLFHTFCGTPAYVAPEVLARKGYDGAKVDIWSCGVILFVLMAGFLPFHD----RNVMAMYKKI 240          
BLAST of CF931524 vs. ExPASy Swiss-Prot
Match: CIPK9_ORYSJ (CBL-interacting protein kinase 9 OS=Oryza sativa subsp. japonica GN=CIPK9 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 4.637e-13
Identity = 39/83 (46.99%), Postives = 51/83 (61.45%), Query Frame = 3
Query:    3 ENTLLDGSAAPRLKICDFGYS-------KSSVLHSRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFED 230
            EN LLD   A  LK+ DFG S       +  +LH+      GTP Y+APEVL+ + YDG  ADVWSCG+ L+V++ G  PF+D
Sbjct:  154 ENLLLDSHGA--LKVSDFGLSAFAPQTKEDGLLHT----ACGTPNYVAPEVLADKGYDGMAADVWSCGIILFVLMAGYLPFDD 230          
BLAST of CF931524 vs. ExPASy Swiss-Prot
Match: BRSK1_MOUSE (BR serine/threonine-protein kinase 1 OS=Mus musculus GN=Brsk1 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 4.637e-13
Identity = 36/89 (40.45%), Postives = 57/89 (64.04%), Query Frame = 3
Query:    3 ENTLLDGSAAPRLKICDFGYSKSSVLHSRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQDDPKNFMKTIQK 269
            EN LLD      ++I DFG +   V  S  +++ G+P Y  PEV+   +YDG+ AD+WSCGV L+ +LVGA PF+D D+ +  ++ +++
Sbjct:  160 ENLLLDEKN--NIRIADFGMASLQVGDSLLETSCGSPHYACPEVIKGEKYDGRRADMWSCGVILFALLVGALPFDD-DNLRQLLEKVKR 245          
BLAST of CF931524 vs. ExPASy Swiss-Prot
Match: BRSK1_HUMAN (BR serine/threonine-protein kinase 1 OS=Homo sapiens GN=BRSK1 PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 4.637e-13
Identity = 36/89 (40.45%), Postives = 57/89 (64.04%), Query Frame = 3
Query:    3 ENTLLDGSAAPRLKICDFGYSKSSVLHSRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQDDPKNFMKTIQK 269
            EN LLD      ++I DFG +   V  S  +++ G+P Y  PEV+   +YDG+ AD+WSCGV L+ +LVGA PF+D D+ +  ++ +++
Sbjct:  176 ENLLLDEKN--NIRIADFGMASLQVGDSLLETSCGSPHYACPEVIKGEKYDGRRADMWSCGVILFALLVGALPFDD-DNLRQLLEKVKR 261          
BLAST of CF931524 vs. ExPASy Swiss-Prot
Match: KPCD3_MOUSE (Serine/threonine-protein kinase D3 OS=Mus musculus GN=Prkd3 PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 6.057e-13
Identity = 37/80 (46.25%), Postives = 53/80 (66.25%), Query Frame = 3
Query:    3 ENTLLDGSAA-PRLKICDFGYSKSSVLHSRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQDD 239
            EN LL  +   P++K+CDFG+++     S  +S VGTPAY+APEVL  + Y+  L D+WS GV +YV L G +PF + +D
Sbjct:  702 ENVLLASAEPFPQVKLCDFGFARIIGEKSFRRSVVGTPAYLAPEVLRSKGYNRSL-DMWSVGVIVYVSLSGTFPFNEDED 780          
BLAST of CF931524 vs. ExPASy Swiss-Prot
Match: KPCD2_RAT (Serine/threonine-protein kinase D2 OS=Rattus norvegicus GN=Prkd2 PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 6.057e-13
Identity = 37/80 (46.25%), Postives = 52/80 (65.00%), Query Frame = 3
Query:    3 ENTLL-DGSAAPRLKICDFGYSKSSVLHSRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQDD 239
            EN LL      P++K+CDFG+++     S  +S VGTPAY+APEVL  + Y+  L D+WS GV +YV L G +PF + +D
Sbjct:  679 ENVLLASADPFPQVKLCDFGFARIIGEKSFRRSVVGTPAYLAPEVLLNQGYNRSL-DMWSVGVIMYVSLSGTFPFNEDED 757          
The following BLAST results are available for this feature:
BLAST of CF931524 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
Y7165_DICDI4.637e-1347.56Probable serine/threonine-protein kinase DDB_G0277... [more]
KPCD3_HUMAN4.637e-1346.25Serine/threonine-protein kinase D3 OS=Homo sapiens... [more]
CIPKS_ORYSJ4.637e-1344.33CBL-interacting protein kinase 28 OS=Oryza sativa ... [more]
CIPKP_ORYSJ4.637e-1346.25CBL-interacting protein kinase 25 OS=Oryza sativa ... [more]
CIPKJ_ARATH4.637e-1345.16CBL-interacting serine/threonine-protein kinase 19... [more]
CIPK9_ORYSJ4.637e-1346.99CBL-interacting protein kinase 9 OS=Oryza sativa s... [more]
BRSK1_MOUSE4.637e-1340.45BR serine/threonine-protein kinase 1 OS=Mus muscul... [more]
BRSK1_HUMAN4.637e-1340.45BR serine/threonine-protein kinase 1 OS=Homo sapie... [more]
KPCD3_MOUSE6.057e-1346.25Serine/threonine-protein kinase D3 OS=Mus musculus... [more]
KPCD2_RAT6.057e-1346.25Serine/threonine-protein kinase D2 OS=Rattus norve... [more]

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Properties
Property NameValue
Genbank descriptionEST0603 Mature peel (flavedo) cDNA subtraction library Citrus sinensis cDNA clone 6P295 similar to serine/threonine protein kinase (acc# S60611), mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF931524 ID=CF931524; Name=CF931524; organism=Citrus sinensis; type=EST; length=284bp
TGGAAAATACCCTATTAGATGGAAGTGCTGCCCCACGCCTGAAAATATGT
GACTTTGGTTACTCTAAGTCATCTGTATTGCATTCAAGACCCAAATCAAC
AGTTGGAACTCCGGCTTATATAGCACCAGAAGTTCTTTCTCGGAGAGAAT
ATGATGGAAAATTAGCAGATGTATGGTCATGTGGGGTCACTCTCTATGTT
ATGCTAGTTGGTGCATACCCTTTTGAAGACCAAGATGACCCTAAAAATTT
CATGAAAACAATTCAGAAAATAATGGCAGTTCAG
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