CF972318

Overview
NameCF972318
Unique NameCF972318
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length723
Libraries
Library NameType
sweet orange flesh cDNAcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3822 contig Csv1_Contig3822:137..859. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF972318 vs. ExPASy Swiss-Prot
Match: FL3H_CALCH (Naringenin,2-oxoglutarate 3-dioxygenase OS=Callistephus chinensis GN=FHT PE=2 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 5.506e-29
Identity = 74/238 (31.09%), Postives = 114/238 (47.90%), Query Frame = 2
Query:   11 QVPTIDLKEIDSEDRVEREKCREELKKAAMDWGVMHLVNHGISDDLTERVKRAGQAFFDQPVEEKEKYANEQASGKIQGYGSKLANNASGQLEWEDYFFHLIYPEDKRDMSIWPKTPSDYTEATSEYARQLRSLATKILAVXXXXXXXXXXXXXXXXXXXXXXXXQMKINYYPKCPQPELALGVEAHTDVSALTFILHNMVPGLQLFYK--DKWVTAKCVPNSIILHIGDTIEILSNG 718
            ++P I L  ID   R E     +E+ KA  DWG+  +V+HG+   L   +    + FF  P +EK ++  +   GK  G+            +W +   +  YP   RD S WP  P+++   T EY++ L  LA K+L V                        ++ +NYYPKCPQP+L LG++ HTD   +T +L + V GLQ      + W+T K V  + ++++GD    LSNG
Sbjct:   37 EIPVISLAGIDGCRRAE---ICDEIVKACEDWGIFQVVDHGVDTKLLSDMTGLARDFFHLPTQEKLRF--DMTGGKKGGFIVSSHLQGEAVQDWREIVTYFSYPIKARDYSRWPDKPNEWRAVTEEYSKVLMGLACKLLEVLSEAMGLEKEALTKACVDMDQ---KVVVNYYPKCPQPDLTLGLKRHTDPGTITLLLQDQVGGLQATRDGGESWITVKPVEGAFVVNLGDHGHYLSNG 266          
BLAST of CF972318 vs. ExPASy Swiss-Prot
Match: FL3H_MALDO (Naringenin,2-oxoglutarate 3-dioxygenase OS=Malus domestica PE=2 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.227e-28
Identity = 72/238 (30.25%), Postives = 116/238 (48.74%), Query Frame = 2
Query:   11 QVPTIDLKEIDSEDRVEREKCREELKKAAMDWGVMHLVNHGISDDLTERVKRAGQAFFDQPVEEKEKYANEQASGKIQGYGSKLANNASGQLEWEDYFFHLIYPEDKRDMSIWPKTPSDYTEATSEYARQLRSLATKILAVXXXXXXXXXXXXXXXXXXXXXXXXQMKINYYPKCPQPELALGVEAHTDVSALTFILHNMVPGLQLFYKD--KWVTAKCVPNSIILHIGDTIEILSNG 718
            ++P I L  ID  +    E C++ +  A  DWG+  +V+HG+  +L   +    + FF  P EEK ++  + + GK  G+            +W +   +  YP   RD S WP  P  + E T +Y+ +L  LA K+L V                        ++ +N+YPKCPQP+L LG++ HTD   +T +L + V GLQ    D   W+T + V  + ++++GD   +LSNG
Sbjct:   38 EIPIISLAGIDEVEGRRGEICKK-IVAACEDWGIFQIVDHGVDAELISEMTGLAREFFALPSEEKLRF--DMSGGKKGGFIVSSHLQGEAVQDWREIVTYFSYPIRHRDYSRWPDKPEAWREVTKKYSDELMGLACKLLGVLSEAMGLDTEALTKACVDMDQ---KVVVNFYPKCPQPDLTLGLKRHTDPGTITLLLQDQVGGLQATRDDGKTWITVQPVEGAFVVNLGDHGHLLSNG 269          
BLAST of CF972318 vs. ExPASy Swiss-Prot
Match: FL3H_PETHY (Naringenin,2-oxoglutarate 3-dioxygenase (Fragment) OS=Petunia hybrida GN=AN3 PE=1 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.602e-28
Identity = 74/241 (30.71%), Postives = 125/241 (51.87%), Query Frame = 2
Query:   11 QVPTIDLKEIDSEDRVEREKCREELKKAAMDWGVMHLVNHGISDDLTERVKRAGQAFFDQPVEEKEKYANEQASGKIQGYGSKLANNASGQL--EWEDYFFHLIYPEDKRDMSIWPKTPSDYTEATSEYARQLRSLATKILAVXXXXXXXXXXXXXXXXXXXXXXXXQMKINYYPKCPQPELALGVEAHTDVSALTFILHNMVPGLQLFYKDK---WVTAKCVPNSIILHIGDTIEILSNG 718
            ++P I L+ ID E     E C +++ KA  DWGV  +V+HG+  ++  ++    + FF  P EEK ++  + + GK  G+   ++++  G++  +W +   +  YP   RD S WP  P  +   T +Y+ +L  LA K+L V                        ++ +N+YPKCP+P+L LG++ HTD   +T +L + V GLQ   KD    W+T + V  + ++++GD    LSNG
Sbjct:   40 EIPIISLEGIDDETGKRAEIC-DKIVKACEDWGVFQVVDHGVDAEVISQMTTFAKEFFALPPEEKLRF--DMSGGKKGGF--IVSSHLQGEVVQDWREIVTYFSYPTRARDYSRWPDKPEGWIAVTQKYSEKLMELACKLLDVLSEAMGLEKEALTKACVDMDQ---KVVVNFYPKCPEPDLTLGLKRHTDPGTITLLLQDQVGGLQA-TKDNGKTWITVQPVEGAFVVNLGDHGHFLSNG 271          
BLAST of CF972318 vs. ExPASy Swiss-Prot
Match: G3O23_WHEAT (Gibberellin 3-beta-dioxygenase 2-3 OS=Triticum aestivum GN=GA3ox2-3 PE=2 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.038e-27
Identity = 84/250 (33.60%), Postives = 118/250 (47.20%), Query Frame = 2
Query:    2 EGPQVPTIDLKEIDSEDRVEREKCREELKKAAMDWGVMHLVNHGISDDLTERVKRAGQAFFDQPVEEKEKYANEQASGKIQGYGSKLANNASGQLEW-EDYFFHLIYPEDKRD--MSIWPKTPSDYTE---ATSEYARQLRSLATKILA---VXXXXXXXXXXXXXXXXXXXXXXXXQMKINYYPKCPQPELALGVEAHTDVSALTFILHNMVPGLQLFY--KDKWVTAKCVPNSIILHIGDTIEILSNG 718
            E   VP +D+++             E +  AA DWG   LV HG+  DL  RV+ A    F  P  EK +       G   GYGS   ++   +  W E Y F    P + R     +WPK   DY        E+ R++R+LA K+L    V                         M +N+YPKCP P+ ALG+ AHTD    TF+L ++VPGLQLF    D+WVT   VP ++++++GD  +IL+NG
Sbjct:   45 EPDAVPVVDMRD---------PFAAEAVGLAAQDWGAFLLVGHGVPLDLLVRVEAAIAGMFALPASEKMRAVRRP--GDSCGYGSPPISSFFSKCMWSEGYTFS---PANLRSDLRKLWPKAGHDYRHFCAVMEEFHREMRALADKLLELFLVALGLTGEQVAAVESEQKIAETMTATMHLNWYPKCPDPKRALGLIAHTDSGFFTFVLQSLVPGLQLFRHGPDRWVTVPAVPGAMVVNVGDLFQILTNG 280          
BLAST of CF972318 vs. ExPASy Swiss-Prot
Match: FL3H_VITVI (Naringenin,2-oxoglutarate 3-dioxygenase OS=Vitis vinifera GN=F3H PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 3.946e-27
Identity = 73/239 (30.54%), Postives = 114/239 (47.70%), Query Frame = 2
Query:   11 QVPTIDL-KEIDSEDRVEREKCREELKKAAMDWGVMHLVNHGISDDLTERVKRAGQAFFDQPVEEKEKYANEQASGKIQGYGSKLANNASGQLEWEDYFFHLIYPEDKRDMSIWPKTPSDYTEATSEYARQLRSLATKILAVXXXXXXXXXXXXXXXXXXXXXXXXQMKINYYPKCPQPELALGVEAHTDVSALTFILHNMVPGLQLFYK--DKWVTAKCVPNSIILHIGDTIEILSNG 718
            ++P I L KE      V  E CR+ + +A  DWG+  +VNHG+  +L   + R  + FF  P EE  ++  + + GK  G+            +W +   +  YP   RD S WP  P  +   T EY+ +L  LA K+L V                        ++ +N+YP+CPQP+L LG++ HTD   +T +L + V GLQ        W+T + V  + ++++GD    LSNG
Sbjct:   37 EIPVISLTKESMKLAAVVDEICRK-IVEACEDWGIFQVVNHGVDSNLISEMTRLAREFFALPPEENVRF--DMSGGKKGGFIVSSHLQGEAVQDWREIVTYFSYPLRTRDYSRWPDKPEGWRSVTQEYSEKLMGLACKLLEVLSEAMDLDKDALTNACVDMDQ---KVVVNFYPQCPQPDLTLGLKRHTDPGTITLLLQDQVGGLQATRDGGKTWITVQPVEGAFVVNLGDHGHYLSNG 269          
BLAST of CF972318 vs. ExPASy Swiss-Prot
Match: G3O22_WHEAT (Gibberellin 3-beta-dioxygenase 2-2 OS=Triticum aestivum GN=GA3ox2-2 PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 5.154e-27
Identity = 85/251 (33.86%), Postives = 119/251 (47.41%), Query Frame = 2
Query:    5 GPQ-VPTIDLKEIDSEDRVEREKCREE-LKKAAMDWGVMHLVNHGISDDLTERVKRAGQAFFDQPVEEKEKYANEQASGKIQGYGSKLANNASGQLEW-EDYFFHLIYPEDKRD--MSIWPKTPSDYTE---ATSEYARQLRSLATKILA---VXXXXXXXXXXXXXXXXXXXXXXXXQMKINYYPKCPQPELALGVEAHTDVSALTFILHNMVPGLQLFY--KDKWVTAKCVPNSIILHIGDTIEILSNG 718
            GP  VP +D+          R+ C  E +  AA DWG   L  HG+  +L  RV+ A    F  P  EK +       G   GYGS   ++   +  W E Y F    P + R     +WPK   DY        E+ R++R+LA K+L    V                         M +N+YPKCP P+ ALG+ AHTD    TF+L ++VPGLQLF    D+WVT   VP ++++++GD  +IL+NG
Sbjct:   45 GPDAVPVVDM----------RDPCAAEAVALAAQDWGAFLLEGHGVPLELLARVEAAIAGMFALPASEKMRAVRRP--GDSCGYGSPPISSFFSKCMWSEGYTFS---PANLRSDLRKLWPKAGHDYRHFCAVMEEFHREMRALADKLLELFLVALGLTGEQVAAVESEQKIAETMTATMHLNWYPKCPDPKRALGLIAHTDSGFFTFVLQSLVPGLQLFRHGPDRWVTVPAVPGAMVVNVGDLFQILTNG 280          
BLAST of CF972318 vs. ExPASy Swiss-Prot
Match: FL3H_HORVU (Naringenin,2-oxoglutarate 3-dioxygenase OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 3.340e-26
Identity = 64/237 (27.00%), Postives = 111/237 (46.84%), Query Frame = 2
Query:   14 VPTIDLKEIDSEDRVEREKCREELKKAAMDWGVMHLVNHGISDDLTERVKRAGQAFFDQPVEEKEKYANEQASGKIQGYGSKLANNASGQLEWEDYFFHLIYPEDKRDMSIWPKTPSDYTEATSEYARQLRSLATKILAVXXXXXXXXXXXXXXXXXXXXXXXXQMKINYYPKCPQPELALGVEAHTDVSALTFILHNMVPGLQLFYK--DKWVTAKCVPNSIILHIGDTIEILSNG 718
            VP I L  ID      R + R+ +  A  DWG+  +++HG+  DL   + R  + FF  P E+K +Y  + + GK  G+            +W +   +  YP   RD   WP+ P+ +      Y+ +L  L+  ++ V                        ++ +N+YP+CPQP+L LG++ HTD   +T +L ++V GLQ        W+T + +  + ++++GD    +SNG
Sbjct:   43 VPLISLHGIDG---ARRAQIRDRVAAACEDWGIFQVIDHGVDADLIADMTRLAREFFALPAEDKLRY--DMSGGKKGGFIVSSHLQGEAVQDWREIVTYFSYPVKARDYGRWPEKPAGWCAVVERYSERLMGLSCNLMGVLSEAMGLETEALAKACVDMDQ---KVVVNFYPRCPQPDLTLGLKRHTDPGTITLLLQDLVGGLQATRDGGKNWITVQPISGAFVVNLGDHGHFMSNG 271          
BLAST of CF972318 vs. ExPASy Swiss-Prot
Match: G3O21_WHEAT (Gibberellin 3-beta-dioxygenase 2-1 OS=Triticum aestivum GN=GA3ox2-1 PE=1 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 4.363e-26
Identity = 84/251 (33.47%), Postives = 118/251 (47.01%), Query Frame = 2
Query:    5 GPQ-VPTIDLKEIDSEDRVEREKCREE-LKKAAMDWGVMHLVNHGISDDLTERVKRAGQAFFDQPVEEKEKYANEQASGKIQGYGSKLANNASGQLEW-EDYFFHLIYPEDKRD--MSIWPKTPSDYTE---ATSEYARQLRSLATKILA---VXXXXXXXXXXXXXXXXXXXXXXXXQMKINYYPKCPQPELALGVEAHTDVSALTFILHNMVPGLQLFY--KDKWVTAKCVPNSIILHIGDTIEILSNG 718
            GP  VP +D+          R+ C  E +  AA DWG   L  HG+  +L   V+ A    F  P  EK +       G   GYGS   ++   +  W E Y F    P + R     +WPK   DY        E+ R++R+LA K+L    V                         M +N+YPKCP P+ ALG+ AHTD    TF+L ++VPGLQLF    D+WVT   VP ++++++GD  +IL+NG
Sbjct:   45 GPDAVPVVDM----------RDPCAAEAVALAAQDWGAFLLEGHGVPLELLAGVEAAIGGMFALPASEKMRAVRRP--GDSCGYGSPPISSFFSKCMWSEGYTFS---PANLRSDLRKLWPKAGHDYRHFCAVMEEFHREMRALADKLLELFLVALGLTGEQVAAVESEHKIAETMTATMHLNWYPKCPDPKRALGLIAHTDSGFFTFVLQSLVPGLQLFRHGPDRWVTVPAVPGAMVVNVGDLFQILTNG 280          
BLAST of CF972318 vs. ExPASy Swiss-Prot
Match: ACCO_ACTDE (1-aminocyclopropane-1-carboxylate oxidase OS=Actinidia deliciosa GN=ACO PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.828e-25
Identity = 70/236 (29.66%), Postives = 119/236 (50.42%), Query Frame = 2
Query:   17 PTIDLKEIDSEDRVEREKCREELKKAAMDWGVMHLVNHGISDDLTERVKRAGQAFFDQPVEEKEKYANEQASGKIQGYGSKLANNASGQLEWEDYFFHLIYPEDKRDMSIWPKTPSDYTEATSEYARQLRSLATKILAVXXXXXXXXXXXXXXXXXXXXXXXXQMKINYYPKCPQPELALGVEAHTDVSALTFILH-NMVPGLQLFYKDKWVTAKCVPNSIILHIGDTIEILSNGE 721
            P ID+++++ E   ER    E++K A  +WG   LVNHGIS +L + V+R  +  +++ +E++ K   E  + K    G +   +    L+WE  FF    P    ++S  P    D+ +A  E+A +L  LA ++L +                          K++ YP CP+PEL  G+ AHTD   +  +   N V GLQL    +W+    + +SI+++IGD +E+++NG+
Sbjct:    5 PVIDMEKLNGE---ERAPTMEKIKDACENWGFFELVNHGISHELMDTVERLTKEHYNKCMEQRFK---EMVATK----GLEAVQSEINDLDWESTFFLRHLPVS--NISEIPDLEQDHRKAMKEFAEKLEKLAEQLLDLLCENVGLEKGYLKKAFYGSKGPTFGTKVSNYPPCPRPELIKGLRAHTDAGGIILLFQDNKVSGLQLLKDGEWIDVPPMKHSIVINIGDQLEVITNGK 228          
BLAST of CF972318 vs. ExPASy Swiss-Prot
Match: NCS1_COPJA (S-norcoclaurine synthase 1 OS=Coptis japonica GN=NCS1 PE=1 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.075e-24
Identity = 65/240 (27.08%), Postives = 116/240 (48.33%), Query Frame = 2
Query:   11 QVPTIDLKEIDSEDRVEREKCREELKK---AAMDWGVMHLVNHGISDDLTERVKRAGQAFFDQPVEEKEKYANEQASGKIQGYGSKLANNASGQLEWEDYFFHLIYPEDKRDMSIWPKTPSDYTEATSEYARQLRSLATKILAVXXXXXXXXXXXXXXXXXXXXXXXXQMKINYYPKCPQPELALGVEAHTDVSALTFILH-NMVPGLQLFYKDKWVTAKCVPNSIILHIGDTIEILSNG 718
            ++P IDL  +     ++++   +EL K   A +DWG   L+NHG+ +++ E++K   + FF  P +EK  Y   Q    ++GYG     +   +L+W D  F +  P  +R+M  WP +P+ + E   +Y+ +L+ +A  +  +                        ++     P        LG+  H+D + LT ++  N V GL +   +KWV  K +  + +++IGD IEI+SNG
Sbjct:   50 EIPVIDLSRL-----LDQQYACDELAKFHSACLDWGFFQLINHGVREEVIEKMKVDTEDFFRLPFKEKNAY--RQLPNGMEGYGQAFVTSEEQKLDWADMHFLITKPVQERNMRFWPTSPTSFRETMEKYSMELQKVAMCLTGMMAKNLGLESEILTKPLRTVFNREDEL----LPSMSSCGEGLGLSPHSDATGLTLLIQVNEVNGLHIKKDEKWVPIKPILGAFVVNIGDVIEIMSNG 278          
The following BLAST results are available for this feature:
BLAST of CF972318 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 82
Match NameE-valueIdentityDescription
FL3H_CALCH5.506e-2931.09Naringenin,2-oxoglutarate 3-dioxygenase OS=Callist... [more]
FL3H_MALDO1.227e-2830.25Naringenin,2-oxoglutarate 3-dioxygenase OS=Malus d... [more]
FL3H_PETHY1.602e-2830.71Naringenin,2-oxoglutarate 3-dioxygenase (Fragment)... [more]
G3O23_WHEAT1.038e-2733.60Gibberellin 3-beta-dioxygenase 2-3 OS=Triticum aes... [more]
FL3H_VITVI3.946e-2730.54Naringenin,2-oxoglutarate 3-dioxygenase OS=Vitis v... [more]
G3O22_WHEAT5.154e-2733.86Gibberellin 3-beta-dioxygenase 2-2 OS=Triticum aes... [more]
FL3H_HORVU3.340e-2627.00Naringenin,2-oxoglutarate 3-dioxygenase OS=Hordeum... [more]
G3O21_WHEAT4.363e-2633.47Gibberellin 3-beta-dioxygenase 2-1 OS=Triticum aes... [more]
ACCO_ACTDE2.828e-2529.661-aminocyclopropane-1-carboxylate oxidase OS=Actin... [more]
NCS1_COPJA1.075e-2427.08S-norcoclaurine synthase 1 OS=Coptis japonica GN=N... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionANS-partial sweet orange flesh cDNA Citrus sinensis cDNA similar to partial anthocyanidin synthase, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF972318 ID=CF972318; Name=CF972318; organism=Citrus sinensis; type=EST; length=723bp
TGAAGGGCCTCAAGTTCCCACAATTGATCTCAAGGAAATTGACTCTGAGG
ACAGAGTTGAACGCGAGAAATGTCGCGAGGAGCTCAAGAAAGCTGCCATG
GATTGGGGTGTTATGCACCTTGTTAACCATGGGATTTCGGATGATCTCAC
TGAACGCGTCAAGAGAGCCGGTCAGGCCTTTTTCGATCAGCCGGTTGAGG
AGAAAGAGAAGTATGCCAATGAGCAGGCTTCGGGAAAGATTCAGGGTTAC
GGAAGCAAGCTAGCTAATAATGCTAGTGGCCAGCTTGAGTGGGAGGACTA
TTTCTTCCACCTTATTTATCCTGAAGATAAAAGGGATATGTCCATTTGGC
CTAAGACTCCAAGCGACTATACAGAGGCTACCAGTGAATACGCAAGGCAA
CTGAGAAGCCTAGCGACGAAAATTCTGGCAGTGTTGTCACTTGGCTTGGG
ACTGGAAGAGGGGAGGCTGGAAAAGGAAGTTGGTGGCCTAGAAGAGCTCC
TTCTTCAGATGAAGATCAATTACTATCCCAAATGCCCTCAACCAGAACTG
GCTCTTGGTGTTGAAGCTCACACAGATGTGAGTGCACTCACTTTCATTCT
TCACAACATGGTTCCGGGCCTGCAGCTCTTCTACAAAGACAAATGGGTGA
CTGCTAAATGTGTTCCAAATTCGATCATCTTGCACATTGGTGACACCATT
GAAATTCTGAGCAATGGCGAGTA
back to top