CF972318

Overview
NameCF972318
Unique NameCF972318
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length723
Libraries
Library NameType
sweet orange flesh cDNAcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3822 contig Csv1_Contig3822:137..859. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF972318 vs. ExPASy Swiss-Prot
Match: IDS2_HORVU (Mugineic-acid 3-dioxygenase OS=Hordeum vulgare GN=IDS2 PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.188e-23
Identity = 64/225 (28.44%), Postives = 106/225 (47.11%), Query Frame = 2
Query:   56 VEREKCREELKKAAMD----WGVMHLVNHGISDDLTERVKRAGQAFFDQPVEEKEKYANEQASGKIQGYGSKLANNASGQLEWEDYFFHLIYPEDKRDMSIWPKTPSDYTEATSEYARQLRSLATKILAVXXXXXXXXXXXXXXXXXXXXXXXXQMKINYYPKCPQPELALGVEAHTDVSALTFILHNMVPGLQLFYKDKWVTAKCVPNSIILHIGDTIEILSNG 718
            ++  + R+E+++A +D    +G + +VNHGIS+ +   +      FFD P E+K ++ +E  S + + +    A    G+  W D    L+YP    D   WP  P    E    Y    R +A +IL +                         + INYYP  P P   LG+  H D   +T +L   VPGL++ YK  W+  + VPNS++++ G  +E+++NG
Sbjct:   38 IDMSRGRDEVRQAILDSGKEYGFIQVVNHGISEPMLHEMYAVCHEFFDMPAEDKAEFFSEDRSERNKLFCGS-AFETLGEKYWIDVL-ELLYPLPSGDTKDWPHKPQMLREVVGNYTSLARGVAMEILRLLCEGLGLRPDFFVGDISGGRVV---VDINYYPPSPNPSRTLGLPPHCDRDLMTVLLPGAVPGLEIAYKGGWIKVQPVPNSLVINFGLQLEVVTNG 257          
BLAST of CF972318 vs. ExPASy Swiss-Prot
Match: ACCH3_ARATH (1-aminocyclopropane-1-carboxylate oxidase homolog 4 OS=Arabidopsis thaliana GN=At1g06650 PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.552e-23
Identity = 64/234 (27.35%), Postives = 115/234 (49.15%), Query Frame = 2
Query:   14 VPTIDLKEIDSEDRVEREKCREELKKAAMDWGVMHLVNHGISDDLTERVKRAGQAFFDQPVEEKEKYANEQASGKIQGYGSKLANNASGQLEWEDYFFHLIYPEDKRDMSIWPKTPSDYTEATSEYARQLRSLATKILAVXXXXXXXXXXXXXXXXXXXXXXXXQMKINYYPKCPQPELALGVEAHTDVSALTFILHNMVPGLQLFYKDKWVTAKCVPNSIILHIGDTIEILSN 715
            +PTIDL   D +D ++R    EE+K+AA  WG   ++NHG+S +L E++K+  + F +Q  E ++++ +   S +   Y S     +S    W D F   + P+  +   +    P    +   EY++Q+ +L   +  +                         M  +YYP CP+P+L LG   H+D S LT +L + + GLQ+  +  W     V  ++I++IGD +++++N
Sbjct:   64 IPTIDLGGRDFQDAIKRNNAIEEIKEAAAKWGFFQVINHGVSLELLEKMKKGVRDFHEQSQEVRKEFYSRDFSRRFL-YLSNFDLFSSPAANWRDTFSCTMAPDTPKPQDL----PEICRDIMMEYSKQVMNLGKFLFELLSEALGLEPNHLNDMDCSKGLL---MLSHYYPPCPEPDLTLGTSQHSDNSFLTVLLPDQIEGLQVRREGHWFDVPHVSGALIINIGDLLQLITN 289          
BLAST of CF972318 vs. ExPASy Swiss-Prot
Match: GAOX3_ARATH (Gibberellin 20 oxidase 3 OS=Arabidopsis thaliana GN=20ox3 PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.027e-23
Identity = 72/244 (29.51%), Postives = 109/244 (44.67%), Query Frame = 2
Query:   11 QVPTIDLKEIDSEDRVEREKCREELKKAAMDWGVMHLVNHGISDDLTERVKRAGQAFFDQPVEEKEKYANEQASGKIQGYGSKLANNASGQLEWEDYFFHLIYPEDKRDMSIWPKTPS--------DYTEATSEYARQLRSLATKILAVXXXXXXXXXXXXXXXXXXXXXXXXQMKINYYPKCPQPELALGVEAHTDVSALTFILHNMVPGLQLFYKDKWVTAKCVPNSIILHIGDTIEILSNG 718
            QVP IDL    S D     +    + KAA   G   + NHG+ + L  R      +FF  P  EK+K   ++  G+  GY S      S +L W++       PE+K          S        D+ +   EYA  + +L+ KI+ +                          ++NYYP+C QPELALG   H D ++LT +  + V GLQ+F  +KW +    P++ +++IGDT   L+NG
Sbjct:   57 QVPLIDLAGFLSGDSCLASEATRLVSKAATKHGFFLITNHGVDESLLSRAYLHMDSFFKAPACEKQKA--QRKWGESSGYASSFVGRFSSKLPWKETLSFKFSPEEKIHSQTVKDFVSKKMGDGYEDFGKVYQEYAEAMNTLSLKIMELLGMSLGVERRYFKEFFEDSDSI---FRLNYYPQCKQPELALGTGPHCDPTSLTILHQDQVGGLQVFVDNKWQSIPPNPHAFVVNIGDTFMALTNG 295          
BLAST of CF972318 vs. ExPASy Swiss-Prot
Match: ACCO_MUSAC (1-aminocyclopropane-1-carboxylate oxidase OS=Musa acuminata GN=MAO1B PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.647e-23
Identity = 68/240 (28.33%), Postives = 110/240 (45.83%), Query Frame = 2
Query:   14 VPTIDLKEIDSEDRVEREKCREELKKAAMDWGVMHLVNHGISDDLTERVKRAGQAFFDQPVEEKEKYANEQASGKI--QGYGSKLANNASGQLEWEDYFFHLIYPEDKRDMSIWPKTPSDYTEATSEYARQLRSLATKILAVXXXXXXXXXXXXXXXXXXXXXXXXQM--KINYYPKCPQPELALGVEAHTDVSALTFILHN-MVPGLQLFYKDKWVTAKCVPNSIILHIGDTIEILSNG 718
            +P ID  ++D ++R E       +     +WG   LVNHGI  +L ERVK+     +    E  E     Q    +  +G G +L N     ++WED F         +D + WP  P D+ E   EY  ++R LA K++ V                            K+++YP CP+ +L  G+ AHTD   +  +  +  V GLQ+    +W+  + + ++I+++ GD IE+LSNG
Sbjct:    3 IPVIDFSKLDGKERAET---MARIANGCEEWGFFQLVNHGIPVELLERVKKVSSECYKLREERFEGSKPVQLLDTLVKEGDGQRLDN-----VDWEDVFV-------LQDDNEWPSNPPDFEETMKEYREEIRKLAEKMMEVMDENLGFEKGCIKKAFSGDGQHPPFFGTKVSHYPPCPRLDLVKGLRAHTDAGGVILLFQDDQVGGLQMLKDGRWIDVQPLADAIVINTGDQIEVLSNG 227          
BLAST of CF972318 vs. ExPASy Swiss-Prot
Match: ACCO2_MALDO (1-aminocyclopropane-1-carboxylate oxidase 2 OS=Malus domestica GN=ACO2 PE=2 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.647e-23
Identity = 68/236 (28.81%), Postives = 114/236 (48.31%), Query Frame = 2
Query:   17 PTIDLKEIDSEDRVEREKCREELKKAAMDWGVMHLVNHGISDDLTERVKRAGQAFFDQPVEEKEKYANEQASGKIQGYGSKLANNASGQLEWEDYFFHLIYPEDKRDMSIWPKTPSDYTEATSEYARQLRSLATKILAVXXXXXXXXXXXXXXXXXXXXXXXXQMKINYYPKCPQPELALGVEAHTDVSALTFILH-NMVPGLQLFYKDKWVTAKCVPNSIILHIGDTIEILSNGE 721
            P +D+  I+ E   ER    E++  A  +WG   LVNHGIS +L + V++  +  + + +E++ K   E  + K    G +   +    L+WE  FF    P    ++S  P    DY +   E+A +L  LA K+L +                          K++ YP CP+P+L  G+ AHTD   +  +   + V GLQL    +W+    V +SI++++GD IE+++NG+
Sbjct:    5 PVVDMDLINGE---ERAATLEKINDACENWGFFELVNHGISTELLDTVEKMNKDHYKKTMEQRFK---EMVAAK----GLEAVQSEIHYLDWESTFFLRHLPSS--NISEIPDLEEDYRKTMKEFAVELEKLAEKLLDLLCENLGLEKGYLKKAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGEWMDVPPVHHSIVINLGDQIEVITNGK 228          
BLAST of CF972318 vs. ExPASy Swiss-Prot
Match: G3OX1_ARATH (Gibberellin 3-beta-dioxygenase 1 OS=Arabidopsis thaliana GN=GA4 PE=1 SV=2)

HSP 1 Score: 108.227 bits (269), Expect = 4.515e-23
Identity = 71/243 (29.22%), Postives = 117/243 (48.15%), Query Frame = 2
Query:    5 GPQVPTIDLKEIDSEDRVEREKCREELKKAAMDWGVMHLVNHGISDDLTERVKRAGQAFFDQPVEEKEKYANEQASGKIQGYG-SKLANNASGQLEWEDYFFHLIYP-EDKRDMSIWPKTPSDYTEATSEYARQLRSLATKI--LAVXXXXXXXXXXXXXXXXXXXXXXXXQMKINYYPKCPQPELALGVEAHTDVSALTFILHNMVPGLQLFYKD-KWVTAKCVPNSIILHIGDTIEILSNG 718
            G  +P IDL   D+ +++           A   WG   + NHG+   L + ++    + F  PV+ K K A  +    + GYG +++A+  + Q+ W + F     P  D R   +WP+   +Y +   EY   ++ LA+K+  LA+                         +++N+YP CP+P+ A+G+ AHTD + LT +  N   GLQ+F  D  WVT    P S+++++GD   ILSNG
Sbjct:   54 GENIPLIDLDHPDATNQIGH---------ACRTWGAFQISNHGVPLGLLQDIEFLTGSLFGLPVQRKLKSARSETG--VSGYGVARIASFFNKQM-WSEGFTITGSPLNDFR--KLWPQHHLNYCDIVEEYEEHMKKLASKLMWLALNSLGVSEEDIEWASLSSDLNWAQAALQLNHYPVCPEPDRAMGLAAHTDSTLLTILYQNNTAGLQVFRDDLGWVTVPPFPGSLVVNVGDLFHILSNG 282          
BLAST of CF972318 vs. ExPASy Swiss-Prot
Match: G3OX2_ARATH (Gibberellin 3-beta-dioxygenase 2 OS=Arabidopsis thaliana GN=GA4H PE=1 SV=2)

HSP 1 Score: 107.842 bits (268), Expect = 5.896e-23
Identity = 70/239 (29.29%), Postives = 110/239 (46.03%), Query Frame = 2
Query:   14 VPTIDLKEIDSEDRVEREKCREELKKAAMDWGVMHLVNHGISDDLTERVKRAGQAFFDQPVEEKEKYANEQASGKIQGYGSKLANNASGQLEWEDYFFHLIYP-EDKRDMSIWPKTPSDYTEATSEYARQLRSLATKIL--AVXXXXXXXXXXXXXXXXXXXXXXXXQMKINYYPKCPQPELALGVEAHTDVSALTFILHNMVPGLQLFYKD-KWVTAKCVPNSIILHIGDTIEILSNG 718
            +P IDL +I     V           A   WG   + NHG+   L + ++    + F  PV+ K K A  +    + GYG     +   +  W + F  +  P  D R   +WP     Y E   EY   ++ LA K++  A+                         +++N+YPKCP+P+ A+G+ AHTD + +T +  N   GLQ+F  D  WVTA  VP S+++++GD + IL+NG
Sbjct:   50 LPLIDLSDIHVATLVGH---------ACTTWGAFQITNHGVPSRLLDDIEFLTGSLFRLPVQRKLKAARSENG--VSGYGVARIASFFNKKMWSEGFTVIGSPLHDFR--KLWPSHHLKYCEIIEEYEEHMQKLAAKLMWFALGSLGVEEKDIQWAGPNSDFQGTQAVIQLNHYPKCPEPDRAMGLAAHTDSTLMTILYQNNTAGLQVFRDDVGWVTAPPVPGSLVVNVGDLLHILTNG 275          
BLAST of CF972318 vs. ExPASy Swiss-Prot
Match: ACCO_PEA (1-aminocyclopropane-1-carboxylate oxidase OS=Pisum sativum GN=ACO PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.006e-22
Identity = 65/236 (27.54%), Postives = 116/236 (49.15%), Query Frame = 2
Query:   17 PTIDLKEIDSEDRVEREKCREELKKAAMDWGVMHLVNHGISDDLTERVKRAGQAFFDQPVEEKEKYANEQASGKIQGYGSKLANNASGQLEWEDYFFHLIYPEDKRDMSIWPKTPSDYTEATSEYARQLRSLATKILAVXXXXXXXXXXXXXXXXXXXXXXXXQMKINYYPKCPQPELALGVEAHTDVSALTFILHN-MVPGLQLFYKDKWVTAKCVPNSIILHIGDTIEILSNGE 721
            P +D+ ++++EDR   +   E +K A  +WG    VNHGIS ++ + V++  +  + + +E++ K   E  + K    G +   +    L+WE  FF    P     +S  P    DY +   E+A +L  LA ++L +                          K++ YP CP+PEL  G+ AHTD   +  +  +  V GLQL   D+W+    + +SI++++GD +E+++NG+
Sbjct:    5 PIVDMGKLNTEDR---KSTMELIKDACENWGFFECVNHGISIEMMDTVEKLTKEHYKKCMEQRFK---EMVATK----GLECVQSEIDDLDWESTFFLRHLPVSS--ISEIPDLDDDYRKVMKEFALKLEELAEELLDLLCENLGLEKGYLKKAFYGSKGPNFGTKVSNYPPCPKPELIKGLRAHTDAGGIILLFQDDKVSGLQLLKDDQWIDVPPMRHSIVINLGDQLEVITNGK 228          
BLAST of CF972318 vs. ExPASy Swiss-Prot
Match: G2OX8_ARATH (Gibberellin 2-beta-dioxygenase 8 OS=Arabidopsis thaliana GN=GA2OX7 PE=1 SV=2)

HSP 1 Score: 106.686 bits (265), Expect = 1.314e-22
Identity = 68/241 (28.22%), Postives = 117/241 (48.55%), Query Frame = 2
Query:    2 EGPQVPTIDLKEIDSEDRVEREKCREELKKAAMDWGVMHLVNHGISDDLTERVKRAGQAFFDQPVEEKEKYANEQASGKIQGYGSKLANNASGQLEWEDYFFHLIYPE--DKRDMSIWPKTPSDYTEATSEYARQLRSLATKILAVXXXXXXXXXXXXXXXXXXXXXXXXQMKINYYPKCPQPELALGVEAHTDVSALTFILHNMVPGLQLFYKDKWVTAKCVPNSIILHIGDTIEILSNG 718
            E  ++P ID+  +      EREKC+E + +A+ +WG   ++NHGIS D+ E++++     F +P ++K K  +E+ S     +G+  A +   QL W + F H+   +  D +D +    T S   E  +  +  L  +  ++LA                          +++N YP CP+P    G+  HTD   LT +  + V GLQL   ++W+  K  P ++I++IGD  +  SNG
Sbjct:   38 EEVELPVIDVSRLIDGAEEEREKCKEAIARASREWGFFQVINHGISMDVLEKMRQEQIRVFREPFDKKSK--SEKFSAGSYRWGTPSATSIR-QLSWSEAF-HVPMTDISDNKDFT----TLSSTMEKFASESEALAYMLAEVLA------EKSGQNSSFFKENCVRNTCYLRMNRYPPCPKPSEVYGLMPHTDSDFLTILYQDQVGGLQLIKDNRWIAVKPNPKALIINIGDLFQAWSNG 264          
BLAST of CF972318 vs. ExPASy Swiss-Prot
Match: ACCO_DIACA (Probable 1-aminocyclopropane-1-carboxylate oxidase OS=Dianthus caryophyllus GN=ACO PE=2 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.314e-22
Identity = 60/236 (25.42%), Postives = 115/236 (48.73%), Query Frame = 2
Query:   17 PTIDLKEIDSEDRVEREKCREELKKAAMDWGVMHLVNHGISDDLTERVKRAGQAFFDQPVEEKEKYANEQASGKIQGYGSKLANNASGQLEWEDYFFHLIYPEDKRDMSIWPKTPSDYTEATSEYARQLRSLATKILAVXXXXXXXXXXXXXXXXXXXXXXXXQMKINYYPKCPQPELALGVEAHTDVSALTFILH-NMVPGLQLFYKDKWVTAKCVPNSIILHIGDTIEILSNGE 721
            P ID++++++ + VER    +++K A  +WG   +VNH +S +L ++V+R  +       E  +K+  ++    +Q  G   A +    ++WE  F+    P    ++S  P     Y +   E+A Q+  L+ ++L +                          K++ YP CP+P+L  G+ AHTD   +  +   + V GLQL     WV    + +SI++++GD +E+++NG+
Sbjct:    8 PIIDMEKLNNYNGVERSLVLDQIKDACHNWGFFQVVNHSLSHELMDKVERMTK-------EHYKKFREQKFKDMVQTKGLVSAESQVNDIDWESTFYLRHRPTS--NISEVPDLDDQYRKLMKEFAAQIERLSEQLLDLLCENLGLEKAYLKNAFYGANGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGHWVDVPPMKHSIVVNLGDQLEVITNGK 234          
The following BLAST results are available for this feature:
BLAST of CF972318 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 82
Match NameE-valueIdentityDescription
IDS2_HORVU1.188e-2328.44Mugineic-acid 3-dioxygenase OS=Hordeum vulgare GN=... [more]
ACCH3_ARATH1.552e-2327.351-aminocyclopropane-1-carboxylate oxidase homolog ... [more]
GAOX3_ARATH2.027e-2329.51Gibberellin 20 oxidase 3 OS=Arabidopsis thaliana G... [more]
ACCO_MUSAC2.647e-2328.331-aminocyclopropane-1-carboxylate oxidase OS=Musa ... [more]
ACCO2_MALDO2.647e-2328.811-aminocyclopropane-1-carboxylate oxidase 2 OS=Mal... [more]
G3OX1_ARATH4.515e-2329.22Gibberellin 3-beta-dioxygenase 1 OS=Arabidopsis th... [more]
G3OX2_ARATH5.896e-2329.29Gibberellin 3-beta-dioxygenase 2 OS=Arabidopsis th... [more]
ACCO_PEA1.006e-2227.541-aminocyclopropane-1-carboxylate oxidase OS=Pisum... [more]
G2OX8_ARATH1.314e-2228.22Gibberellin 2-beta-dioxygenase 8 OS=Arabidopsis th... [more]
ACCO_DIACA1.314e-2225.42Probable 1-aminocyclopropane-1-carboxylate oxidase... [more]

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Properties
Property NameValue
Genbank descriptionANS-partial sweet orange flesh cDNA Citrus sinensis cDNA similar to partial anthocyanidin synthase, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF972318 ID=CF972318; Name=CF972318; organism=Citrus sinensis; type=EST; length=723bp
TGAAGGGCCTCAAGTTCCCACAATTGATCTCAAGGAAATTGACTCTGAGG
ACAGAGTTGAACGCGAGAAATGTCGCGAGGAGCTCAAGAAAGCTGCCATG
GATTGGGGTGTTATGCACCTTGTTAACCATGGGATTTCGGATGATCTCAC
TGAACGCGTCAAGAGAGCCGGTCAGGCCTTTTTCGATCAGCCGGTTGAGG
AGAAAGAGAAGTATGCCAATGAGCAGGCTTCGGGAAAGATTCAGGGTTAC
GGAAGCAAGCTAGCTAATAATGCTAGTGGCCAGCTTGAGTGGGAGGACTA
TTTCTTCCACCTTATTTATCCTGAAGATAAAAGGGATATGTCCATTTGGC
CTAAGACTCCAAGCGACTATACAGAGGCTACCAGTGAATACGCAAGGCAA
CTGAGAAGCCTAGCGACGAAAATTCTGGCAGTGTTGTCACTTGGCTTGGG
ACTGGAAGAGGGGAGGCTGGAAAAGGAAGTTGGTGGCCTAGAAGAGCTCC
TTCTTCAGATGAAGATCAATTACTATCCCAAATGCCCTCAACCAGAACTG
GCTCTTGGTGTTGAAGCTCACACAGATGTGAGTGCACTCACTTTCATTCT
TCACAACATGGTTCCGGGCCTGCAGCTCTTCTACAAAGACAAATGGGTGA
CTGCTAAATGTGTTCCAAATTCGATCATCTTGCACATTGGTGACACCATT
GAAATTCTGAGCAATGGCGAGTA
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