CF972318

Overview
NameCF972318
Unique NameCF972318
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length723
Libraries
Library NameType
sweet orange flesh cDNAcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3822 contig Csv1_Contig3822:137..859. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF972318 vs. ExPASy Swiss-Prot
Match: ACCH3_SOLLC (1-aminocyclopropane-1-carboxylate oxidase homolog OS=Solanum lycopersicum GN=ACO3 PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.716e-22
Identity = 65/235 (27.66%), Postives = 113/235 (48.09%), Query Frame = 2
Query:   17 PTIDLKEIDSEDRVEREKCREELKKAAMDWGVMHLVNHGISDDLTERVKRAGQAFFDQPVEEKEKYANEQASGKIQGYGSKLANNASG--QLEWEDYFFHLIYPEDKRDMSIWPKTPSDYTEATSEYARQLRSLATKILAVXXXXXXXXXXXXXXXXXXXXXXXXQMKINYYPKCPQPELALGVEAHTDVSALTFILHNMVPGLQLFYKDKWVTAKCVPNSIILHIGDTIEILSN 715
            P IDL+ ID ED ++ ++  ++++ A+  WG   +VNHGI   + +R  +  + FF+Q  E K++Y     + K+  Y S L    S      W D  F  + P            P+   E+  ++++ ++ L   +L +                            NYYP CPQPEL +G   HTD+  +T +L + + GLQ+ +++ WV     P S++++IGD +++LSN
Sbjct:   59 PVIDLQGID-EDPIKHKEIVDKVRDASEKWGFFQVVNHGIPTSVLDRTLQGTRQFFEQDNEVKKQYYTRDTAKKVV-YTSNLDLYKSSVPAASWRDTIFCYMAPNPPSLQEF----PTPCGESLIDFSKDVKKLGFTLLELLSEGLGLDRSYLKDYMDCFHLFC---SCNYYPPCPQPELTMGTIQHTDIGFVTILLQDDMGGLQVLHQNHWVDVPPTPGSLVVNIGDFLQLLSN 284          
BLAST of CF972318 vs. ExPASy Swiss-Prot
Match: ACCH2_ARATH (1-aminocyclopropane-1-carboxylate oxidase homolog 2 OS=Arabidopsis thaliana GN=At1g06640 PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 3.822e-22
Identity = 63/235 (26.81%), Postives = 113/235 (48.09%), Query Frame = 2
Query:   14 VPTIDLKEIDSEDRVEREKCREELKKAAMDWGVMHLVNHGISDDLTERVKRAGQAFFDQPVE-EKEKYANEQASGKIQGYGSKLANNASGQLEWEDYFFHLIYPEDKRDMSIWPKTPSDYTEATSEYARQLRSLATKILAVXXXXXXXXXXXXXXXXXXXXXXXXQMKINYYPKCPQPELALGVEAHTDVSALTFILHNMVPGLQLFYKDKWVTAKCVPNSIILHIGDTIEILSN 715
            +PTIDL   D +D ++ +   E +K+AA  WG   ++NHG+S +L E++K   + F +QP E  K+ Y+ +   G+   Y S      +    W D F+  + P+      +    P    +   EY++Q+  L   +  +                        +M  +Y+P CP+P+L  G   H+D S LT +L + + GLQ+  +  W     VP ++I++IGD +++++N
Sbjct:   64 IPTIDLGGRDFQDAIKHKNAIEGIKEAAAKWGFFQVINHGVSLELLEKMKDGVRDFHEQPPEVRKDLYSRD--FGRKFIYLSNFDLYTAAAANWRDTFYCYMAPDPPEPQDL----PEICRDVMMEYSKQVMILGEFLFELLSEALGLNPNHLKDMECLKGL---RMLCHYFPPCPEPDLTFGTSKHSDGSFLTVLLPDNIEGLQVCREGYWFDVPHVPGALIINIGDLLQLITN 289          
BLAST of CF972318 vs. ExPASy Swiss-Prot
Match: HY6H_HYONI (Hyoscyamine 6-dioxygenase OS=Hyoscyamus niger GN=H6H PE=1 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 8.515e-22
Identity = 67/249 (26.91%), Postives = 116/249 (46.59%), Query Frame = 2
Query:    5 GPQVPTIDLKEIDSEDRVEREKCREELKKAAMDWGVMHLVNHGISDDLTERVKRAGQAFFDQPVEEKEKYANE----------QASGKIQGYGSKLANNASGQLEWEDYFFHLIYPEDKRDMSIWPKTPSDYTEATSEYARQLRSLATKILAVXXXXXXXXXXXXXXXXXXXXXXXXQMKINYYPKCPQPELALGVEAHTDVSALTFILHNMVPGL-QLFYKD-KWVTAKCVPNSIILHIGDTIEILSN 715
            G  VP IDL++             +++ KA  D+G+  ++NHG  ++L        + FF  P EEKEK+  +          +   K+   G +L+N     L W+D   H  +P D+  ++ WP+ P+ Y E  ++Y+ ++R L  ++L                           M  NYYP CP P   LG   H D + +T +L   +PGL QL  KD  W+  + +P + ++++G T+++++N
Sbjct:   32 GNDVPIIDLQQ-------HHHLLVQQITKACQDFGLFQVINHGFPEELMLETMEVCKEFFALPAEEKEKFKPKGEAAKFELPLEQKAKLYVEGEQLSNEEF--LYWKDTLAHGCHPLDQDLVNSWPEKPAKYREVVAKYSVEVRKLTMRML----DYICEGLGLKLGYFDNELSQIQMMLTNYYPPCPDPSSTLGSGGHYDGNLIT-LLQQDLPGLQQLIVKDATWIAVQPIPTAFVVNLGLTLKVITN 266          
BLAST of CF972318 vs. ExPASy Swiss-Prot
Match: ACCO4_SOLLC (1-aminocyclopropane-1-carboxylate oxidase 4 OS=Solanum lycopersicum GN=ACO4 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.112e-21
Identity = 63/236 (26.69%), Postives = 116/236 (49.15%), Query Frame = 2
Query:   17 PTIDLKEIDSEDRVEREKCREELKKAAMDWGVMHLVNHGISDDLTERVKRAGQAFFDQPVEEKEKYANEQASGKIQGYGSKLANNASGQLEWEDYFFHLIYPEDKRDMSIWPKTPSDYTEATSEYARQLRSLATKILAVXXXXXXXXXXXXXXXXXXXXXXXXQMKINYYPKCPQPELALGVEAHTDVSALTFILH-NMVPGLQLFYKDKWVTAKCVPNSIILHIGDTIEILSNGE 721
            P I+L+ ++ +   ER K  E +K A  +WG   LVNHGI  ++ + V++  +  + + +E++ K   E  + K    G +        L+WE  FF    P    ++S  P    +Y E   ++A++L  LA ++L +                          K++ YP CP+P+L  G+ AHTD   +  +   + V GLQL   ++W+    + +SI++++GD +E+++NG+
Sbjct:    5 PIINLENLNGD---ERAKTMEMIKDACENWGFFELVNHGIPHEVMDTVEKLTKGHYKKCMEQRFK---ELVASK----GLEAVQAEVTDLDWESTFFLRHLPTS--NISQVPDLDEEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKNAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDEQWIDVPPMRHSIVVNLGDQLEVITNGK 228          
BLAST of CF972318 vs. ExPASy Swiss-Prot
Match: ACCO1_MALDO (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Malus domestica PE=1 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.452e-21
Identity = 65/236 (27.54%), Postives = 113/236 (47.88%), Query Frame = 2
Query:   17 PTIDLKEIDSEDRVEREKCREELKKAAMDWGVMHLVNHGISDDLTERVKRAGQAFFDQPVEEKEKYANEQASGKIQGYGSKLANNASGQLEWEDYFFHLIYPEDKRDMSIWPKTPSDYTEATSEYARQLRSLATKILAVXXXXXXXXXXXXXXXXXXXXXXXXQMKINYYPKCPQPELALGVEAHTDVSALTFILH-NMVPGLQLFYKDKWVTAKCVPNSIILHIGDTIEILSNGE 721
            P +DL  ++ E   ER    E++  A  +WG   LVNHG+S +L + V++  +  + + +E++ K   E  + K    G     +    L+WE  FF    P    ++S  P    +Y +   E+A +L  LA K+L +                          K++ YP CP+P+L  G+ AH+D   +  +   + V GLQL    +WV    + +SI++++GD IE+++NG+
Sbjct:    5 PVVDLSLVNGE---ERAATLEKINDACENWGFFELVNHGMSTELLDTVEKMTKDHYKKTMEQRFK---EMVAAK----GLDDVQSEIHDLDWESTFFLRHLPSS--NISEIPDLEEEYRKTMKEFAVELEKLAEKLLDLLCENLGLEKGYLKKVFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHSDAGGIILLFQDDKVSGLQLLKDGEWVDVPPMHHSIVINLGDQIEVITNGK 228          
BLAST of CF972318 vs. ExPASy Swiss-Prot
Match: G3OX4_ARATH (Gibberellin 3-beta-dioxygenase 4 OS=Arabidopsis thaliana GN=At1g80330 PE=1 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.477e-21
Identity = 65/241 (26.97%), Postives = 105/241 (43.57%), Query Frame = 2
Query:   14 VPTIDLKEIDSEDRVEREKCREELKKAAMDWGVMHLVNHGISDDLTERVKRAGQAFFDQPVEEKEKYANEQASGKIQGYGSKLANNASGQLEWEDYFFHLIYPEDKRDMSIWPKTPSDYTEATSEYARQLRSLATK----ILAVXXXXXXXXXXXXXXXXXXXXXXXXQMKINYYPKCPQPELALGVEAHTDVSALTFILHNMVPGLQLFYKDK-WVTAKCVPNSIILHIGDTIEILSNGE 721
            +P IDL   D    +           A+  WG   + NHGIS  L + ++   +  FD P E K + A+      + GYG    +    +  W + F            ++WP   + Y     EY  ++  LA++    IL                           +++N+YP CP+PE A+G+ AHTD + LT +  +   GLQ+F ++  WVT +  P  ++++IGD   ILSNG+
Sbjct:   49 IPVIDLSNPDVTTLIG---------DASKTWGAFQIANHGISQKLLDDIESLSKTLFDMPSERKLEAASSDKG--VSGYGEPRISPFFEKKMWSEGFTIADDSYRNHFNTLWPHDHTKYCGIIQEYVDEMEKLASRLLYCILGSLGVTVEDIEWAHKLEKSGSKVGRGAIRLNHYPVCPEPERAMGLAAHTDSTILTILHQSNTGGLQVFREESGWVTVEPAPGVLVVNIGDLFHILSNGK 278          
BLAST of CF972318 vs. ExPASy Swiss-Prot
Match: ACCO1_SOLLC (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Solanum lycopersicum GN=ACO1 PE=2 SV=2)

HSP 1 Score: 102.064 bits (253), Expect = 3.236e-21
Identity = 62/236 (26.27%), Postives = 116/236 (49.15%), Query Frame = 2
Query:   17 PTIDLKEIDSEDRVEREKCREELKKAAMDWGVMHLVNHGISDDLTERVKRAGQAFFDQPVEEKEKYANEQASGKIQGYGSKLANNASGQLEWEDYFFHLIYPEDKRDMSIWPKTPSDYTEATSEYARQLRSLATKILAVXXXXXXXXXXXXXXXXXXXXXXXXQMKINYYPKCPQPELALGVEAHTDVSALTFILH-NMVPGLQLFYKDKWVTAKCVPNSIILHIGDTIEILSNGE 721
            P I+L++++ +   ER    E +K A  +WG   LVNHGI  ++ + V++  +  + + +E++ K   E  + K    G +        L+WE  FF    P    ++S  P    +Y E   ++A++L  LA ++L +                          K++ YP CP+P+L  G+ AHTD   +  +   + V GLQL   ++W+    + +SI++++GD +E+++NG+
Sbjct:    5 PIINLEKLNGD---ERANTMEMIKDACENWGFFELVNHGIPHEVMDTVEKMTKGHYKKCMEQRFK---ELVASK----GLEAVQAEVTDLDWESTFFLRHLPTS--NISQVPDLDEEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKNAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDEQWIDVPPMRHSIVVNLGDQLEVITNGK 228          
BLAST of CF972318 vs. ExPASy Swiss-Prot
Match: ACCO4_PETHY (1-aminocyclopropane-1-carboxylate oxidase 4 OS=Petunia hybrida GN=ACO4 PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 5.519e-21
Identity = 63/236 (26.69%), Postives = 114/236 (48.31%), Query Frame = 2
Query:   17 PTIDLKEIDSEDRVEREKCREELKKAAMDWGVMHLVNHGISDDLTERVKRAGQAFFDQPVEEKEKYANEQASGKIQGYGSKLANNASGQLEWEDYFFHLIYPEDKRDMSIWPKTPSDYTEATSEYARQLRSLATKILAVXXXXXXXXXXXXXXXXXXXXXXXXQMKINYYPKCPQPELALGVEAHTDVSALTFILHN-MVPGLQLFYKDKWVTAKCVPNSIILHIGDTIEILSNGE 721
            P I+L+ +      ER+   E +K A  +WG   LVNHGI  ++ + V++  +  + + +E++ K   E  + K    G +        L+WE  FF    P    ++S  P    +Y E   ++A++L  LA ++L +                          K++ YP CP+P+L  G+ AHTD   +  +  +  V GLQL   D+W+    + +SI++++GD +E+++NG+
Sbjct:    5 PIINLENLCG---AERDATMEMIKDACENWGFFELVNHGIPHEVMDTVEKFTKGHYKKCMEQRFK---ELVASK----GLEAVQAEVTDLDWESTFFLRHLPVS--NISEVPDLDDEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKKAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDDQWIDVPPMRHSIVINLGDQLEVITNGK 228          
BLAST of CF972318 vs. ExPASy Swiss-Prot
Match: ACCO1_PETHY (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Petunia hybrida GN=ACO1 PE=1 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 7.208e-21
Identity = 59/229 (25.76%), Postives = 114/229 (49.78%), Query Frame = 2
Query:   38 IDSEDRVEREKCREELKKAAMDWGVMHLVNHGISDDLTERVKRAGQAFFDQPVEEKEKYANEQASGKIQGYGSKLANNASGQLEWEDYFFHLIYPEDKRDMSIWPKTPSDYTEATSEYARQLRSLATKILAVXXXXXXXXXXXXXXXXXXXXXXXXQMKINYYPKCPQPELALGVEAHTDVSALTFILH-NMVPGLQLFYKDKWVTAKCVPNSIILHIGDTIEILSNGE 721
            +D  + VER    E +K A  +WG   LVNHGI  ++ + V++  +  + + +E  +++    AS  ++G  +++ +     ++WE  FF    P    ++S  P    +Y E   ++A++L  LA ++L +                          K++ YP CP+P+L  G+ AHTD   +  +   + V GLQL    +W+    + +SI++++GD +E+++NG+
Sbjct:    9 LDKVNGVERAATMEMIKDACENWGFFELVNHGIPREVMDTVEKMTKGHYKKCME--QRFKELVASKALEGVQAEVTD-----MDWESTFFLKHLPIS--NISEVPDLDEEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKNAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPMRHSIVVNLGDQLEVITNGK 228          
BLAST of CF972318 vs. ExPASy Swiss-Prot
Match: ACCO1_CUCME (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Cucumis melo GN=ACO1 PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 7.208e-21
Identity = 60/235 (25.53%), Postives = 112/235 (47.66%), Query Frame = 2
Query:   17 PTIDLKEIDSEDRVEREKCREELKKAAMDWGVMHLVNHGISDDLTERVKRAGQAFFDQPVEEKEKYANEQASGKIQGYGSKLANNASGQLEWEDYFFHLIYPEDKRDMSIWPKTPSDYTEATSEYARQLRSLATKILAVXXXXXXXXXXXXXXXXXXXXXXXXQMKINYYPKCPQPELALGVEAHTDVSALTFILH-NMVPGLQLFYKDKWVTAKCVPNSIILHIGDTIEILSNG 718
            P I+L+ I+ + R    K  E+++ A  +WG   LVNHGI  +  + V++  +  + + +EE+ K         +   G + A      ++WE  FF    PE   ++S       +Y +   E+A++L +LA ++L +                          K++ YP CP+P+L  G+ AHTD   +  +   + V GLQL     W+    + ++I++++GD +E+++NG
Sbjct:    5 PIINLENINDDGRA---KILEQIEDACQNWGFFELVNHGIPHEFLDMVEKMTRDHYKKCMEERFKET-------VLSKGLEAAQAEVNDMDWESTFFLRHLPES--NISQMSDLDEEYKKIMKEFAKKLENLAEELLDLLCENLGLEKGYLKKAFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGNWIDVPPMRHAIVVNLGDQLEVITNG 227          
The following BLAST results are available for this feature:
BLAST of CF972318 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 82
Match NameE-valueIdentityDescription
ACCH3_SOLLC1.716e-2227.661-aminocyclopropane-1-carboxylate oxidase homolog ... [more]
ACCH2_ARATH3.822e-2226.811-aminocyclopropane-1-carboxylate oxidase homolog ... [more]
HY6H_HYONI8.515e-2226.91Hyoscyamine 6-dioxygenase OS=Hyoscyamus niger GN=H... [more]
ACCO4_SOLLC1.112e-2126.691-aminocyclopropane-1-carboxylate oxidase 4 OS=Sol... [more]
ACCO1_MALDO1.452e-2127.541-aminocyclopropane-1-carboxylate oxidase 1 OS=Mal... [more]
G3OX4_ARATH2.477e-2126.97Gibberellin 3-beta-dioxygenase 4 OS=Arabidopsis th... [more]
ACCO1_SOLLC3.236e-2126.271-aminocyclopropane-1-carboxylate oxidase 1 OS=Sol... [more]
ACCO4_PETHY5.519e-2126.691-aminocyclopropane-1-carboxylate oxidase 4 OS=Pet... [more]
ACCO1_PETHY7.208e-2125.761-aminocyclopropane-1-carboxylate oxidase 1 OS=Pet... [more]
ACCO1_CUCME7.208e-2125.531-aminocyclopropane-1-carboxylate oxidase 1 OS=Cuc... [more]

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Properties
Property NameValue
Genbank descriptionANS-partial sweet orange flesh cDNA Citrus sinensis cDNA similar to partial anthocyanidin synthase, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF972318 ID=CF972318; Name=CF972318; organism=Citrus sinensis; type=EST; length=723bp
TGAAGGGCCTCAAGTTCCCACAATTGATCTCAAGGAAATTGACTCTGAGG
ACAGAGTTGAACGCGAGAAATGTCGCGAGGAGCTCAAGAAAGCTGCCATG
GATTGGGGTGTTATGCACCTTGTTAACCATGGGATTTCGGATGATCTCAC
TGAACGCGTCAAGAGAGCCGGTCAGGCCTTTTTCGATCAGCCGGTTGAGG
AGAAAGAGAAGTATGCCAATGAGCAGGCTTCGGGAAAGATTCAGGGTTAC
GGAAGCAAGCTAGCTAATAATGCTAGTGGCCAGCTTGAGTGGGAGGACTA
TTTCTTCCACCTTATTTATCCTGAAGATAAAAGGGATATGTCCATTTGGC
CTAAGACTCCAAGCGACTATACAGAGGCTACCAGTGAATACGCAAGGCAA
CTGAGAAGCCTAGCGACGAAAATTCTGGCAGTGTTGTCACTTGGCTTGGG
ACTGGAAGAGGGGAGGCTGGAAAAGGAAGTTGGTGGCCTAGAAGAGCTCC
TTCTTCAGATGAAGATCAATTACTATCCCAAATGCCCTCAACCAGAACTG
GCTCTTGGTGTTGAAGCTCACACAGATGTGAGTGCACTCACTTTCATTCT
TCACAACATGGTTCCGGGCCTGCAGCTCTTCTACAAAGACAAATGGGTGA
CTGCTAAATGTGTTCCAAATTCGATCATCTTGCACATTGGTGACACCATT
GAAATTCTGAGCAATGGCGAGTA
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