CK739460

Overview
NameCK739460
Unique NameCK739460
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length524
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK739460 vs. ExPASy Swiss-Prot
Match: CYPH_YEAST (Peptidyl-prolyl cis-trans isomerase OS=Saccharomyces cerevisiae GN=CPR1 PE=1 SV=3)

HSP 1 Score: 172.17 bits (435), Expect = 1.341e-42
Identity = 86/135 (63.70%), Postives = 95/135 (70.37%), Query Frame = 2
Query:  113 FDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSG 517
            FDVE  G+P GR+V  L+   VPKTAENFRALCTGEKG G       Y GS FHR+IP FMLQ            +SIYG KFPDENFK  H  PGLLSMANAGP+TNGSQFFITTV   WLDG+HVVFG+V+ G
Sbjct:    6 FDVEADGQPIGRVVFKLYNDIVPKTAENFRALCTGEKGFG-------YAGSPFHRVIPDFMLQGGDFTAGNGTGGKSIYGGKFPDENFKKHHDRPGLLSMANAGPNTNGSQFFITTVPCPWLDGKHVVFGEVVDG 133          
BLAST of CK739460 vs. ExPASy Swiss-Prot
Match: CYPB_VICFA (Peptidyl-prolyl cis-trans isomerase, chloroplastic OS=Vicia faba PE=1 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 1.341e-42
Identity = 87/142 (61.27%), Postives = 99/142 (69.72%), Query Frame = 2
Query:   92 KSQTKFTFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSG 517
            K  +K  FD+EI G+ AGRIV+GLFG AVPKT ENF+ L TG KG G       Y+GS FHRIIP+FM+Q             SIYG KF DE+F LKH GPG+LSMANAGP+TNGSQFFI TV T WLD RHVVFG V+ G
Sbjct:   79 KVTSKIFFDIEIGGESAGRIVIGLFGDAVPKTVENFKTLSTGAKGYG-------YQGSFFHRIIPNFMIQGGDFTEGNGTGGVSIYGSKFEDESFDLKHVGPGVLSMANAGPNTNGSQFFICTVPTPWLDNRHVVFGHVIEG 213          
BLAST of CK739460 vs. ExPASy Swiss-Prot
Match: PPID_YARLI (Peptidyl-prolyl cis-trans isomerase D OS=Yarrowia lipolytica GN=CPR6 PE=3 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 1.751e-42
Identity = 86/137 (62.77%), Postives = 97/137 (70.80%), Query Frame = 2
Query:  113 FDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGNG 523
            F+V I GK  G+I   LF   VPKTAENFRALCTGEKG  ++G PLH+KGS+FHR+I  FM+Q            ESIYGEKFPDE F   H  P LLSMANAGP+TNGSQFFITT  T  LD +HVVFGK+LSG G
Sbjct:    8 FEVAIGGKTIGKIYFELFADKVPKTAENFRALCTGEKGNTQAGIPLHFKGSSFHRVIKDFMVQGGDFTAGNGTGGESIYGEKFPDEAFPYPHDQPFLLSMANAGPNTNGSQFFITTTETPHLDNKHVVFGKLLSGKG 144          
BLAST of CK739460 vs. ExPASy Swiss-Prot
Match: PPIB_YARLI (Peptidyl-prolyl cis-trans isomerase B OS=Yarrowia lipolytica GN=CPR2 PE=3 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 1.751e-42
Identity = 87/138 (63.04%), Postives = 98/138 (71.01%), Query Frame = 2
Query:  104 KFTFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSG 517
            K  FD++   +  G+IVMGL+G  VPKT ENFRALCTGE G G       YKGS FHR+I +FM+Q            ESIYG KFPDENF+LKHT P  LSMANAG DTNGSQFFITTV TSWLDG+HVVFG+VL G
Sbjct:   33 KVYFDIKQGEESLGKIVMGLYGDVVPKTVENFRALCTGETGKG-------YKGSKFHRVIKNFMIQGGDFTRGDGTGGESIYGRKFPDENFQLKHTKPYKLSMANAGRDTNGSQFFITTVVTSWLDGKHVVFGEVLEG 163          
BLAST of CK739460 vs. ExPASy Swiss-Prot
Match: PPIA_PONPY (Peptidyl-prolyl cis-trans isomerase A OS=Pongo pygmaeus GN=PPIA PE=2 SV=4)

HSP 1 Score: 171.785 bits (434), Expect = 1.751e-42
Identity = 86/135 (63.70%), Postives = 94/135 (69.63%), Query Frame = 2
Query:  113 FDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSG 517
            FD+ + G+P GR+   LF   VPKTAENFRAL TGEKG G       YKGS FHRIIP FM Q            +SIYGEKF DENF LKHTGPG+LSMANAGP+TNGSQFFI T  T WLDG+HVVFGKV  G
Sbjct:    8 FDIAVDGEPLGRVSFELFADKVPKTAENFRALSTGEKGFG-------YKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEG 135          
BLAST of CK739460 vs. ExPASy Swiss-Prot
Match: PPIA_PIG (Peptidyl-prolyl cis-trans isomerase A OS=Sus scrofa GN=PPIA PE=1 SV=2)

HSP 1 Score: 171.785 bits (434), Expect = 1.751e-42
Identity = 86/135 (63.70%), Postives = 94/135 (69.63%), Query Frame = 2
Query:  113 FDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSG 517
            FD+ + G+P GR+   LF   VPKTAENFRAL TGEKG G       YKGS FHRIIP FM Q            +SIYGEKF DENF LKHTGPG+LSMANAGP+TNGSQFFI T  T WLDG+HVVFGKV  G
Sbjct:    8 FDIAVDGEPLGRVSFELFADKVPKTAENFRALSTGEKGFG-------YKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFDDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEG 135          
BLAST of CK739460 vs. ExPASy Swiss-Prot
Match: PPIA_PAPAN (Peptidyl-prolyl cis-trans isomerase A OS=Papio anubis GN=PPIA PE=2 SV=2)

HSP 1 Score: 171.785 bits (434), Expect = 1.751e-42
Identity = 86/135 (63.70%), Postives = 94/135 (69.63%), Query Frame = 2
Query:  113 FDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSG 517
            FD+ + G+P GR+   LF   VPKTAENFRAL TGEKG G       YKGS FHRIIP FM Q            +SIYGEKF DENF LKHTGPG+LSMANAGP+TNGSQFFI T  T WLDG+HVVFGKV  G
Sbjct:    8 FDIAVDGEPLGRVSFELFADKVPKTAENFRALSTGEKGFG-------YKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEG 135          
BLAST of CK739460 vs. ExPASy Swiss-Prot
Match: PPIA_PANTR (Peptidyl-prolyl cis-trans isomerase A OS=Pan troglodytes GN=PPIA PE=3 SV=3)

HSP 1 Score: 171.785 bits (434), Expect = 1.751e-42
Identity = 86/135 (63.70%), Postives = 94/135 (69.63%), Query Frame = 2
Query:  113 FDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSG 517
            FD+ + G+P GR+   LF   VPKTAENFRAL TGEKG G       YKGS FHRIIP FM Q            +SIYGEKF DENF LKHTGPG+LSMANAGP+TNGSQFFI T  T WLDG+HVVFGKV  G
Sbjct:    8 FDIAVDGEPLGRVSFELFADKVPKTAENFRALSTGEKGFG-------YKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEG 135          
BLAST of CK739460 vs. ExPASy Swiss-Prot
Match: PPIA_PANPA (Peptidyl-prolyl cis-trans isomerase A OS=Pan paniscus GN=PPIA PE=3 SV=3)

HSP 1 Score: 171.785 bits (434), Expect = 1.751e-42
Identity = 86/135 (63.70%), Postives = 94/135 (69.63%), Query Frame = 2
Query:  113 FDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSG 517
            FD+ + G+P GR+   LF   VPKTAENFRAL TGEKG G       YKGS FHRIIP FM Q            +SIYGEKF DENF LKHTGPG+LSMANAGP+TNGSQFFI T  T WLDG+HVVFGKV  G
Sbjct:    8 FDIAVDGEPLGRVSFELFADKVPKTAENFRALSTGEKGFG-------YKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEG 135          
BLAST of CK739460 vs. ExPASy Swiss-Prot
Match: PPIA_MACMU (Peptidyl-prolyl cis-trans isomerase A OS=Macaca mulatta GN=PPIA PE=1 SV=2)

HSP 1 Score: 171.785 bits (434), Expect = 1.751e-42
Identity = 86/135 (63.70%), Postives = 94/135 (69.63%), Query Frame = 2
Query:  113 FDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSG 517
            FD+ + G+P GR+   LF   VPKTAENFRAL TGEKG G       YKGS FHRIIP FM Q            +SIYGEKF DENF LKHTGPG+LSMANAGP+TNGSQFFI T  T WLDG+HVVFGKV  G
Sbjct:    8 FDIAVDGEPLGRVSFELFADKVPKTAENFRALSTGEKGFG-------YKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEG 135          
The following BLAST results are available for this feature:
BLAST of CK739460 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 233
Match NameE-valueIdentityDescription
CYPH_YEAST1.341e-4263.70Peptidyl-prolyl cis-trans isomerase OS=Saccharomyc... [more]
CYPB_VICFA1.341e-4261.27Peptidyl-prolyl cis-trans isomerase, chloroplastic... [more]
PPID_YARLI1.751e-4262.77Peptidyl-prolyl cis-trans isomerase D OS=Yarrowia ... [more]
PPIB_YARLI1.751e-4263.04Peptidyl-prolyl cis-trans isomerase B OS=Yarrowia ... [more]
PPIA_PONPY1.751e-4263.70Peptidyl-prolyl cis-trans isomerase A OS=Pongo pyg... [more]
PPIA_PIG1.751e-4263.70Peptidyl-prolyl cis-trans isomerase A OS=Sus scrof... [more]
PPIA_PAPAN1.751e-4263.70Peptidyl-prolyl cis-trans isomerase A OS=Papio anu... [more]
PPIA_PANTR1.751e-4263.70Peptidyl-prolyl cis-trans isomerase A OS=Pan trogl... [more]
PPIA_PANPA1.751e-4263.70Peptidyl-prolyl cis-trans isomerase A OS=Pan panis... [more]
PPIA_MACMU1.751e-4263.70Peptidyl-prolyl cis-trans isomerase A OS=Macaca mu... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_5922 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE56G02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK739460 ID=CK739460; Name=CK739460; organism=Citrus sinensis; type=EST; length=524bp
AATTTGCTTCCACTCACGATGCTATGGGCTGTTGTCCTGTTGGCCACTTT
CTCTTCAATTCAGGCGAAGAAATCGGATCAGAATTTGAAAGAAATCACAA
ACAAAGTTTACCTTTGACGTTGAGATTGCCGGAAAACCTGCCGGACGTAT
TGTAATGGGTCTCTTTGGAAAGGCAGTCCCTAAAACTGCAGAAAATTTCC
GAGCTTTGTGCACAGGGGAGAAAGGGATTGGCAAGAGTGGGAAGCCACTC
CACTACAAGGGAAGTACGTTTCATAGGATTATTCCCAGCTTTATGCTTCA
AGGAGGTGATTTCACTCTTGGTGATGGAAGAGGTGGAGAGTCAATTTATG
GAGAGAAGTTCCCTGACGAAAATTTCAAACTGAAGCACACCGGCCCAGGG
CTTTTGTCAATGGCAAATGCTGGGCCAGACACCAATGGTTCACAATTCTT
CATTACAACTGTGACAACTAGCTGGTTGGATGGCAGGCATGTTGTATTTG
GAAAGGTGCTATCGGGGAATGGAT
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