CK739460

Overview
NameCK739460
Unique NameCK739460
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length524
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK739460 vs. ExPASy Swiss-Prot
Match: PPIA_RABIT (Peptidyl-prolyl cis-trans isomerase A OS=Oryctolagus cuniculus GN=PPIA PE=2 SV=3)

HSP 1 Score: 171.014 bits (432), Expect = 2.987e-42
Identity = 85/135 (62.96%), Postives = 94/135 (69.63%), Query Frame = 2
Query:  113 FDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSG 517
            FD+ + G+P GR+   LF   VPKTAENFRAL TGEKG G       YKGS FHRIIP FM Q            +SIYGEKF DENF LKHTGPG+LSMANAGP+TNGSQFFI T  T WLDG+HVVFG+V  G
Sbjct:    8 FDIAVDGEPLGRVSFELFADKVPKTAENFRALSTGEKGFG-------YKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFLLKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGRVKEG 135          
BLAST of CK739460 vs. ExPASy Swiss-Prot
Match: PPIA_CRIGR (Peptidyl-prolyl cis-trans isomerase A OS=Cricetulus griseus GN=PPIA PE=2 SV=2)

HSP 1 Score: 171.014 bits (432), Expect = 2.987e-42
Identity = 86/135 (63.70%), Postives = 93/135 (68.89%), Query Frame = 2
Query:  113 FDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSG 517
            FD+   G+P GR+   LF   VPKTAENFRAL TGEKG G       YKGS+FHRIIP FM Q             SIYGEKF DENF LKHTGPG+LSMANAGP+TNGSQFFI T  T WLDG+HVVFGKV  G
Sbjct:    8 FDISADGEPLGRVSFELFADKVPKTAENFRALSTGEKGFG-------YKGSSFHRIIPGFMCQGGDFTRHNGTGGRSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEG 135          
BLAST of CK739460 vs. ExPASy Swiss-Prot
Match: CYP40_ARATH (Peptidyl-prolyl cis-trans isomerase CYP40 OS=Arabidopsis thaliana GN=CYP40 PE=2 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 2.987e-42
Identity = 85/143 (59.44%), Postives = 102/143 (71.33%), Query Frame = 2
Query:   98 QTKFTFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIG-KSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGNG 523
            ++K   D+ I G+  GRIV+ L+   VPKTAENFR LCTGEKG+G  +G PLHYKG+ FHR+I  FM+Q            ESIYG KF DENF+LKH   G+LSMAN+GP+TNGSQFFITT  TS LDG+HVVFG+V  G G
Sbjct:    3 RSKCFMDISIGGELEGRIVIELYDDVVPKTAENFRLLCTGEKGLGPNTGVPLHYKGNRFHRVIKGFMIQGGDISANDGTGGESIYGLKFDDENFELKHERKGMLSMANSGPNTNGSQFFITTTRTSHLDGKHVVFGRVTKGMG 145          
BLAST of CK739460 vs. ExPASy Swiss-Prot
Match: PPIC_BOVIN (Peptidyl-prolyl cis-trans isomerase C OS=Bos taurus GN=PPIC PE=2 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 5.096e-42
Identity = 88/138 (63.77%), Postives = 94/138 (68.12%), Query Frame = 2
Query:  104 KFTFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSG 517
            K  FDV I  K  GRIV+GLFGK VPKT ENF AL TGEKG G       YKGS FHR+I  FM+Q             SIYGE FPDENFKLKH G G +SMANAGPDTNGSQFFIT    +WLDG+HVVFGKVL G
Sbjct:   39 KVFFDVRIGDKDVGRIVIGLFGKVVPKTVENFVALATGEKGYG-------YKGSKFHRVIKDFMIQGGDFTRGDGTGGISIYGETFPDENFKLKHYGIGWVSMANAGPDTNGSQFFITLTKPTWLDGKHVVFGKVLDG 169          
BLAST of CK739460 vs. ExPASy Swiss-Prot
Match: PPIB1_RHIOR (Peptidyl-prolyl cis-trans isomerase B1 OS=Rhizopus oryzae GN=cyp8 PE=3 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 5.096e-42
Identity = 84/138 (60.87%), Postives = 98/138 (71.01%), Query Frame = 2
Query:  104 KFTFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSG 517
            K  FD++   +  GRIV+GL+GK VPKTAENF+ L TGE G G       YKGSTFHR+I  FM+Q            +SIYG +F DENFKL+H+ PGLLSMANAG DTNGSQFFITTV T WLDG+HVVFG+VL G
Sbjct:   35 KIYFDIKQGDESLGRIVLGLYGKTVPKTAENFKQLATGENGYG-------YKGSTFHRVIKKFMIQGGDFTNHDGTGGKSIYGNRFADENFKLRHSTPGLLSMANAGRDTNGSQFFITTVVTPWLDGKHVVFGRVLEG 165          
BLAST of CK739460 vs. ExPASy Swiss-Prot
Match: PPIC_HUMAN (Peptidyl-prolyl cis-trans isomerase C OS=Homo sapiens GN=PPIC PE=1 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 6.655e-42
Identity = 87/138 (63.04%), Postives = 94/138 (68.12%), Query Frame = 2
Query:  104 KFTFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSG 517
            K  FDV I  K  GRIV+GLFGK VPKT ENF AL TGEKG G       YKGS FHR+I  FM+Q             SIYGE FPDENFKLKH G G +SMANAGPDTNGSQFFIT    +WLDG+HVVFGKV+ G
Sbjct:   39 KVFFDVRIGDKDVGRIVIGLFGKVVPKTVENFVALATGEKGYG-------YKGSKFHRVIKDFMIQGGDITTGDGTGGVSIYGETFPDENFKLKHYGIGWVSMANAGPDTNGSQFFITLTKPTWLDGKHVVFGKVIDG 169          
BLAST of CK739460 vs. ExPASy Swiss-Prot
Match: PPIA_FELCA (Peptidyl-prolyl cis-trans isomerase A OS=Felis catus GN=PPIA PE=2 SV=3)

HSP 1 Score: 169.859 bits (429), Expect = 6.655e-42
Identity = 85/135 (62.96%), Postives = 93/135 (68.89%), Query Frame = 2
Query:  113 FDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSG 517
            FD+ + G+P GR+   LF   VPKTAENFRAL TGEKG G       YKGS FHRIIP FM Q            +SIYGEKF DENF LKHTGPG+LSMANAGP+TNGSQFFI T  T WLDG+HVVFG V  G
Sbjct:    8 FDIAVDGEPLGRVSFDLFADKVPKTAENFRALSTGEKGFG-------YKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFDDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGMVKEG 135          
BLAST of CK739460 vs. ExPASy Swiss-Prot
Match: PPIB_SCHJA (Peptidyl-prolyl cis-trans isomerase B OS=Schistosoma japonicum PE=2 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 1.135e-41
Identity = 84/142 (59.15%), Postives = 98/142 (69.01%), Query Frame = 2
Query:   92 KSQTKFTFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSG 517
            K   K  FD+E+  +P GRI++GLFGK VPKT ENF+ L  G     K G+   YKGSTFHR+I SFM+Q             SIYGE+FPDENFKLKH G G LSMANAGP+TNG+QFFITT    WLDG+HVVFGKV+ G
Sbjct:   29 KVTEKVFFDIEVDEQPLGRIIIGLFGKTVPKTVENFKQLSIGTTL--KDGRTAAYKGSTFHRVIKSFMIQGGDFTNHDGTGGFSIYGERFPDENFKLKHVGAGWLSMANAGPNTNGAQFFITTTQNPWLDGKHVVFGKVVEG 168          
BLAST of CK739460 vs. ExPASy Swiss-Prot
Match: PPIB_EMENI (Peptidyl-prolyl cis-trans isomerase B OS=Emericella nidulans GN=cpr2 PE=3 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 1.135e-41
Identity = 85/142 (59.86%), Postives = 98/142 (69.01%), Query Frame = 2
Query:   92 KSQTKFTFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSG 517
            K   K  FD++   +  GRIV+GL+GK VP+TAENFRAL TGEKG G       Y+GS FHR+I  FM+Q            +SIYG KF DENFKL+HT  GLLSMANAG DTNGSQFFITT  T WLDG+HVVFG+VL G
Sbjct:   31 KITNKVYFDIQHGDESLGRIVLGLYGKTVPETAENFRALATGEKGFG-------YEGSNFHRVIKDFMIQGGDFTRGDGTGGKSIYGAKFKDENFKLRHTKTGLLSMANAGKDTNGSQFFITTAVTPWLDGKHVVFGEVLEG 165          
BLAST of CK739460 vs. ExPASy Swiss-Prot
Match: PPIC_MOUSE (Peptidyl-prolyl cis-trans isomerase C OS=Mus musculus GN=Ppic PE=1 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 1.483e-41
Identity = 87/138 (63.04%), Postives = 93/138 (67.39%), Query Frame = 2
Query:  104 KFTFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSG 517
            K  FDV I  K  GRIV+GLFG  VPKT ENF AL TGEKG G       YKGS FHR+I  FM+Q             SIYGE FPDENFKLKH G G +SMANAGPDTNGSQFFIT    +WLDG+HVVFGKVL G
Sbjct:   39 KVFFDVRIGDKDVGRIVIGLFGNVVPKTVENFVALATGEKGYG-------YKGSIFHRVIKDFMIQGGDFTARDGTGGMSIYGETFPDENFKLKHYGIGWVSMANAGPDTNGSQFFITLTKPTWLDGKHVVFGKVLDG 169          
The following BLAST results are available for this feature:
BLAST of CK739460 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 233
Match NameE-valueIdentityDescription
PPIA_RABIT2.987e-4262.96Peptidyl-prolyl cis-trans isomerase A OS=Oryctolag... [more]
PPIA_CRIGR2.987e-4263.70Peptidyl-prolyl cis-trans isomerase A OS=Cricetulu... [more]
CYP40_ARATH2.987e-4259.44Peptidyl-prolyl cis-trans isomerase CYP40 OS=Arabi... [more]
PPIC_BOVIN5.096e-4263.77Peptidyl-prolyl cis-trans isomerase C OS=Bos tauru... [more]
PPIB1_RHIOR5.096e-4260.87Peptidyl-prolyl cis-trans isomerase B1 OS=Rhizopus... [more]
PPIC_HUMAN6.655e-4263.04Peptidyl-prolyl cis-trans isomerase C OS=Homo sapi... [more]
PPIA_FELCA6.655e-4262.96Peptidyl-prolyl cis-trans isomerase A OS=Felis cat... [more]
PPIB_SCHJA1.135e-4159.15Peptidyl-prolyl cis-trans isomerase B OS=Schistoso... [more]
PPIB_EMENI1.135e-4159.86Peptidyl-prolyl cis-trans isomerase B OS=Emericell... [more]
PPIC_MOUSE1.483e-4163.04Peptidyl-prolyl cis-trans isomerase C OS=Mus muscu... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_5922 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE56G02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK739460 ID=CK739460; Name=CK739460; organism=Citrus sinensis; type=EST; length=524bp
AATTTGCTTCCACTCACGATGCTATGGGCTGTTGTCCTGTTGGCCACTTT
CTCTTCAATTCAGGCGAAGAAATCGGATCAGAATTTGAAAGAAATCACAA
ACAAAGTTTACCTTTGACGTTGAGATTGCCGGAAAACCTGCCGGACGTAT
TGTAATGGGTCTCTTTGGAAAGGCAGTCCCTAAAACTGCAGAAAATTTCC
GAGCTTTGTGCACAGGGGAGAAAGGGATTGGCAAGAGTGGGAAGCCACTC
CACTACAAGGGAAGTACGTTTCATAGGATTATTCCCAGCTTTATGCTTCA
AGGAGGTGATTTCACTCTTGGTGATGGAAGAGGTGGAGAGTCAATTTATG
GAGAGAAGTTCCCTGACGAAAATTTCAAACTGAAGCACACCGGCCCAGGG
CTTTTGTCAATGGCAAATGCTGGGCCAGACACCAATGGTTCACAATTCTT
CATTACAACTGTGACAACTAGCTGGTTGGATGGCAGGCATGTTGTATTTG
GAAAGGTGCTATCGGGGAATGGAT
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