CK739460

Overview
NameCK739460
Unique NameCK739460
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length524
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK739460 vs. ExPASy Swiss-Prot
Match: PPIA_HEMPU (Peptidyl-prolyl cis-trans isomerase OS=Hemicentrotus pulcherrimus PE=2 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 1.483e-41
Identity = 86/135 (63.70%), Postives = 94/135 (69.63%), Query Frame = 2
Query:  113 FDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSG 517
            FD++  G+  GRIVM L    VPKTAENFRALCTGEKG G       YKGSTFHR+IP FM Q            +SIYGEKF DENF LKHT PG+LSMANAG +TNGSQFFI T  TSWLDG+HVVFG V  G
Sbjct:    8 FDLQANGENLGRIVMELRADVVPKTAENFRALCTGEKGFG-------YKGSTFHRVIPGFMCQGGDFTRHNGTGGKSIYGEKFADENFTLKHTQPGILSMANAGVNTNGSQFFICTAVTSWLDGKHVVFGAVTQG 135          
BLAST of CK739460 vs. ExPASy Swiss-Prot
Match: CYP5_CAEEL (Peptidyl-prolyl cis-trans isomerase 5 OS=Caenorhabditis elegans GN=cyn-5 PE=1 SV=2)

HSP 1 Score: 168.703 bits (426), Expect = 1.483e-41
Identity = 89/142 (62.68%), Postives = 94/142 (66.20%), Query Frame = 2
Query:   92 KSQTKFTFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSG 517
            K   K  FD+EI GKP GRIV+GLFGK VPKTA NF  L    KG G       Y GS FHR+I  FM+Q             SIYGEKF DENFKLKH G G LSMANAG DTNGSQFFITTV T WLDGRHVVFGK+L G
Sbjct:   26 KVTDKVYFDMEIGGKPIGRIVIGLFGKTVPKTATNFIELAKKPKGEG-------YPGSKFHRVIADFMIQGGDFTRGDGTGGRSIYGEKFADENFKLKHYGAGWLSMANAGADTNGSQFFITTVKTPWLDGRHVVFGKILEG 160          
BLAST of CK739460 vs. ExPASy Swiss-Prot
Match: PPIA_DROME (Peptidyl-prolyl cis-trans isomerase OS=Drosophila melanogaster GN=Cyp1 PE=1 SV=2)

HSP 1 Score: 168.318 bits (425), Expect = 1.936e-41
Identity = 84/135 (62.22%), Postives = 96/135 (71.11%), Query Frame = 2
Query:  113 FDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSG 517
            FD+    +P GRIVM L    VPKTAENFRALCTGEKG G       YKGS FHR+IP+FM Q            +SIYG KFPDENF+LKHTG G+LSMANAG +TNGSQFFI TV T+WLD +HVVFG+V+ G
Sbjct:   71 FDMTADNEPLGRIVMELRSDVVPKTAENFRALCTGEKGFG-------YKGSIFHRVIPNFMCQGGDFTNHNGTGGKSIYGNKFPDENFELKHTGSGILSMANAGANTNGSQFFICTVKTAWLDNKHVVFGEVVEG 198          
BLAST of CK739460 vs. ExPASy Swiss-Prot
Match: PPIA_MOUSE (Peptidyl-prolyl cis-trans isomerase A OS=Mus musculus GN=Ppia PE=1 SV=2)

HSP 1 Score: 167.933 bits (424), Expect = 2.529e-41
Identity = 85/135 (62.96%), Postives = 92/135 (68.15%), Query Frame = 2
Query:  113 FDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSG 517
            FD+    +P GR+   LF   VPKTAENFRAL TGEKG G       YKGS+FHRIIP FM Q             SIYGEKF DENF LKHTGPG+LSMANAGP+TNGSQFFI T  T WLDG+HVVFGKV  G
Sbjct:    8 FDITADDEPLGRVSFELFADKVPKTAENFRALSTGEKGFG-------YKGSSFHRIIPGFMCQGGDFTRHNGTGGRSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEG 135          
BLAST of CK739460 vs. ExPASy Swiss-Prot
Match: PPIA_ECHGR (Peptidyl-prolyl cis-trans isomerase OS=Echinococcus granulosus GN=CYP-1 PE=2 SV=2)

HSP 1 Score: 167.548 bits (423), Expect = 3.303e-41
Identity = 88/138 (63.77%), Postives = 95/138 (68.84%), Query Frame = 2
Query:  104 KFTFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSG 517
            K  FD+ I GKPAGRIV  LF   VPKT ENFRALCTGEKG G       YKGS FHRIIP FM Q            +SIYG KF DENF  KH+ P +LSMANAG +TNGSQFFITT  TSWLDG+HVVFG+V SG
Sbjct:    4 KCFFDISIGGKPAGRIVFALFDD-VPKTVENFRALCTGEKGFG-------YKGSKFHRIIPGFMCQGGDFTAGNGTGGKSIYGSKFEDENFNHKHSKPMMLSMANAGKNTNGSQFFITTAVTSWLDGKHVVFGEVESG 133          
BLAST of CK739460 vs. ExPASy Swiss-Prot
Match: PPID_CANAL (Peptidyl-prolyl cis-trans isomerase D OS=Candida albicans GN=CPR6 PE=3 SV=2)

HSP 1 Score: 166.777 bits (421), Expect = 5.634e-41
Identity = 87/143 (60.84%), Postives = 98/143 (68.53%), Query Frame = 2
Query:  101 TKFTFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIG-KSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXX---ESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSG 517
            T   FD+   GKP GR+V  L+   VPKTA NFR+LCTG+KGI  KSGKPL YK S FHR+I  FM Q               ESIYGEKF DENFKL H  P LLSMAN+GP+TNGSQFFITTV T  LDG+HVVFG+V+ G
Sbjct:    4 TPVYFDISCNGKPKGRVVFKLYDDVVPKTAANFRSLCTGDKGISPKSGKPLSYKDSIFHRVIKDFMCQGGDFTAPSDHLGTGGESIYGEKFEDENFKLNHNKPFLLSMANSGPNTNGSQFFITTVPTPHLDGKHVVFGEVIEG 146          
BLAST of CK739460 vs. ExPASy Swiss-Prot
Match: CYPH_ALLCE (Peptidyl-prolyl cis-trans isomerase OS=Allium cepa GN=CYP PE=2 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 5.634e-41
Identity = 82/121 (67.77%), Postives = 91/121 (75.21%), Query Frame = 2
Query:  155 MGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSG 517
            M LF   VP+TAENFRALCTGEKG+G   KPLHYKGS+FHR+IP FM Q            ESIYG KF DENF  KHTGPG+LSMANAGP TNGSQFFI T  T+WLDG+HVVFG+V+ G
Sbjct:    1 MELFQDVVPQTAENFRALCTGEKGMGDR-KPLHYKGSSFHRVIPGFMCQGGDFTAGNGTGGESIYGAKFKDENFIKKHTGPGVLSMANAGPGTNGSQFFICTEKTAWLDGKHVVFGQVVEG 120          
BLAST of CK739460 vs. ExPASy Swiss-Prot
Match: CYP11_RHIOR (Peptidyl-prolyl cis-trans isomerase cyp11 OS=Rhizopus oryzae GN=cyp11 PE=3 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 7.358e-41
Identity = 86/136 (63.24%), Postives = 95/136 (69.85%), Query Frame = 2
Query:  113 FDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGK-SGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSG 517
            FD+++ G   GRIV+ LF   VPKTAENFRALCTGEKGIGK S  PLHYKGS FHRII  FM Q            ESIYG  FPDE+F  KH   GLLSMAN GP+T  SQFFITT  T  LDG+HVVFG+V+SG
Sbjct:    8 FDIDVDGNRIGRIVIELFADQVPKTAENFRALCTGEKGIGKVSNMPLHYKGSIFHRIIKGFMCQGGDFTHRTGKGGESIYGANFPDESFSRKHDTHGLLSMANRGPNTQTSQFFITTRPTPHLDGKHVVFGRVVSG 143          
BLAST of CK739460 vs. ExPASy Swiss-Prot
Match: PPID_DICDI (Peptidyl-prolyl cis-trans isomerase D, mitochondrial OS=Dictyostelium discoideum GN=cypD PE=1 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 3.652e-40
Identity = 83/140 (59.29%), Postives = 97/140 (69.29%), Query Frame = 2
Query:   98 QTKFTFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSG 517
            + K  F ++    P GR+V  L+   VPKTAENFRALCTGEKGIGKSGKPLHYKGS+FHR+I +FM+Q            ESIYG  F DENF +KH   G LSMANAG +TNGSQFFITT  T  L+G H VFG+V+ G
Sbjct:    6 RNKVFFQIKQGNTPLGRVVFELYNDIVPKTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIKNFMVQGGDFTHGTGIGGESIYGRTFNDENFLVKHK-IGCLSMANAGKNTNGSQFFITTAETPHLNGGHTVFGEVVEG 144          
BLAST of CK739460 vs. ExPASy Swiss-Prot
Match: PPIE_PONAB (Peptidyl-prolyl cis-trans isomerase E OS=Pongo abelii GN=PPIE PE=2 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 6.229e-40
Identity = 83/142 (58.45%), Postives = 96/142 (67.61%), Query Frame = 2
Query:   92 KSQTKFTFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSG 517
            +S  +   D++I  KPAGRI M L    VP TAENFR LCT EKG G       +KGS+FHRIIP FM Q            +SIYG+KF DENF LKHTGPGLLSMAN+GP+TNGSQFF+T   T WLDG+HVVFG+V  G
Sbjct:  137 RSNPQVYMDIKIGNKPAGRIQMLLRSDVVPMTAENFRCLCTHEKGFG-------FKGSSFHRIIPQFMCQGGDFTNHNGTGGKSIYGKKFDDENFILKHTGPGLLSMANSGPNTNGSQFFLTCDKTDWLDGKHVVFGEVTEG 271          
The following BLAST results are available for this feature:
BLAST of CK739460 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 233
Match NameE-valueIdentityDescription
PPIA_HEMPU1.483e-4163.70Peptidyl-prolyl cis-trans isomerase OS=Hemicentrot... [more]
CYP5_CAEEL1.483e-4162.68Peptidyl-prolyl cis-trans isomerase 5 OS=Caenorhab... [more]
PPIA_DROME1.936e-4162.22Peptidyl-prolyl cis-trans isomerase OS=Drosophila ... [more]
PPIA_MOUSE2.529e-4162.96Peptidyl-prolyl cis-trans isomerase A OS=Mus muscu... [more]
PPIA_ECHGR3.303e-4163.77Peptidyl-prolyl cis-trans isomerase OS=Echinococcu... [more]
PPID_CANAL5.634e-4160.84Peptidyl-prolyl cis-trans isomerase D OS=Candida a... [more]
CYPH_ALLCE5.634e-4167.77Peptidyl-prolyl cis-trans isomerase OS=Allium cepa... [more]
CYP11_RHIOR7.358e-4163.24Peptidyl-prolyl cis-trans isomerase cyp11 OS=Rhizo... [more]
PPID_DICDI3.652e-4059.29Peptidyl-prolyl cis-trans isomerase D, mitochondri... [more]
PPIE_PONAB6.229e-4058.45Peptidyl-prolyl cis-trans isomerase E OS=Pongo abe... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_5922 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE56G02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK739460 ID=CK739460; Name=CK739460; organism=Citrus sinensis; type=EST; length=524bp
AATTTGCTTCCACTCACGATGCTATGGGCTGTTGTCCTGTTGGCCACTTT
CTCTTCAATTCAGGCGAAGAAATCGGATCAGAATTTGAAAGAAATCACAA
ACAAAGTTTACCTTTGACGTTGAGATTGCCGGAAAACCTGCCGGACGTAT
TGTAATGGGTCTCTTTGGAAAGGCAGTCCCTAAAACTGCAGAAAATTTCC
GAGCTTTGTGCACAGGGGAGAAAGGGATTGGCAAGAGTGGGAAGCCACTC
CACTACAAGGGAAGTACGTTTCATAGGATTATTCCCAGCTTTATGCTTCA
AGGAGGTGATTTCACTCTTGGTGATGGAAGAGGTGGAGAGTCAATTTATG
GAGAGAAGTTCCCTGACGAAAATTTCAAACTGAAGCACACCGGCCCAGGG
CTTTTGTCAATGGCAAATGCTGGGCCAGACACCAATGGTTCACAATTCTT
CATTACAACTGTGACAACTAGCTGGTTGGATGGCAGGCATGTTGTATTTG
GAAAGGTGCTATCGGGGAATGGAT
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