CK739463

Overview
NameCK739463
Unique NameCK739463
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length511
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK739463 vs. ExPASy Swiss-Prot
Match: CATK_MOUSE (Cathepsin K OS=Mus musculus GN=Ctsk PE=2 SV=2)

HSP 1 Score: 107.457 bits (267), Expect = 3.807e-23
Identity = 65/170 (38.24%), Postives = 93/170 (54.71%), Query Frame = 2
Query:   14 TGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSL-DEDQIAANLVKNGPLAVAINA--VYMQTYIGGVSCPYICSR-RLDHGVLLVGYGSAGYAPIRVKEKPYWIIKNSWGESWGENGY 511
            TGKL++LS Q LVDC  E         + GC GG M +AF+Y  + GG+  E+ YPY G D   +C ++ +  AA    +  + + +E  +   + + GP++V+I+A     Q Y  GV     C R  ++H VL+VGYG+        K   +WIIKNSWGESWG  GY
Sbjct:  156 TGKLLALSPQNLVDCVTE---------NYGCGGGYMTTAFQYVQQNGGIDSEDAYPYVGQD--ESCMYNATAKAAKCRGYREIPVGNEKALKRAVARVGPISVSIDASLASFQFYSRGVYYDENCDRDNVNHAVLVVGYGTQ-------KGSKHWIIKNSWGESWGNKGY 307          
BLAST of CK739463 vs. ExPASy Swiss-Prot
Match: CATV_NPVCF (Viral cathepsin OS=Choristoneura fumiferana nuclear polyhedrosis virus GN=Vcath PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 4.972e-23
Identity = 59/165 (35.76%), Postives = 90/165 (54.55%), Query Frame = 2
Query:   20 KLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVAN-FSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRVKEKPYWIIKNSWGESWGENGY 511
            + ++LSEQQL+DCD           D+GC+GGL+++AFE  +  GG+  E DYPY   +    C+ + +K    V   +  +++ E+++   L   GP+ VAI+A  +  Y  G+   Y  +  L+H VLLVGY             P+WI+KN+WG  WGE GY
Sbjct:  156 QFINLSEQQLIDCDF---------VDAGCDGGLLHTAFEAVMNMGGIQAESDYPYEANNGD--CRANAAKFVVKVKKCYRYITVFEEKLKDLLRSVGPIPVAIDASDIVNYKRGI-MKYCANHGLNHAVLLVGYAVENGV-------PFWILKNTWGADWGEQGY 301          
BLAST of CK739463 vs. ExPASy Swiss-Prot
Match: CATV_NPVCD (Viral cathepsin OS=Choristoneura fumiferana defective polyhedrosis virus GN=Vcath PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 6.493e-23
Identity = 62/165 (37.58%), Postives = 89/165 (53.94%), Query Frame = 2
Query:   20 KLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVAN-FSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRVKEKPYWIIKNSWGESWGENGY 511
            +L++LSEQQL+DCD           D GC+GGL+++A+E  +  GG+  E DYPY   +    C+ + +K    V   +  V + E+++   L   GPL VAI+A  +  Y  GV   Y  +  L+H VLLVGY             P+WI+KN+WG  WGE GY
Sbjct:  156 QLINLSEQQLIDCDF---------VDMGCDGGLLHTAYEAVMNMGGIQAENDYPYEANNGD--CRLNAAKFVVKVKKCYRYVLMFEEKLKDLLRIVGPLPVAIDASDIVNYKRGV-IRYCANHGLNHAVLLVGYAVENGV-------PFWILKNTWGTDWGEQGY 301          
BLAST of CK739463 vs. ExPASy Swiss-Prot
Match: CYSP2_MAIZE (Cysteine proteinase 2 OS=Zea mays GN=CCP2 PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 8.480e-23
Identity = 70/174 (40.23%), Postives = 89/174 (51.15%), Query Frame = 2
Query:   11 ATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASV---ANFSVVSLDEDQIAANLVKNGPLAVAINAVY-MQTYIGGVSCPYICSRR---LDHGVLLVGYGSAGYAPIRVKEKPYWIIKNSWGESWGENGY 511
            ATGK +SLSEQQLVDC    +       + GCNGGL + AFEY    GGL  EE YPY G +    CKF    +   V    N ++ + DE + A  LV+  P++VA   +   + Y  GV     C      ++H VL VGYG            PYW+IKNSWG  WG+ GY
Sbjct:  183 ATGKPISLSEQQLVDCGFAFN-------NFGCNGGLPSQAFEYIKYNGGLDTEESYPYQGVN--GICKFKNENVGVKVLDSVNITLGAEDELKDAVGLVR--PVSVAFEVITGFRLYKSGVYTSDHCGTTPMDVNHAVLAVGYGVEDGV-------PYWLIKNSWGADWGDEGY 338          
BLAST of CK739463 vs. ExPASy Swiss-Prot
Match: CATH_PIG (Cathepsin H OS=Sus scrofa GN=CTSH PE=1 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 8.480e-23
Identity = 64/174 (36.78%), Postives = 90/174 (51.72%), Query Frame = 2
Query:    8 LATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSL-DEDQIAANLVKNGPLAVAINA-----VYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRVKEKPYWIIKNSWGESWGENGY 511
            +ATGK++SL+EQQLVDC    +       + GC GGL + AFEY     G+M E+ YPY G D    CKF   K  A V + + +++ DE+ +   +    P++ A        +Y +      SC +    +++H VL VGYG     P       YWI+KNSWG  WG NGY
Sbjct:  156 IATGKMLSLAEQQLVDCAQNFN-------NHGCQGGLPSQAFEYIRYNKGIMGEDTYPYKGQD--DHCKFQPDKAIAFVKDVANITMNDEEAMVEAVALYNPVSFAFEVTNDFLMYRKGIYSSTSC-HKTPDKVNHAVLAVGYGEENGIP-------YWIVKNSWGPQWGMNGY 312          
BLAST of CK739463 vs. ExPASy Swiss-Prot
Match: CATH_BOVIN (Cathepsin H OS=Bos taurus GN=CTSH PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 8.480e-23
Identity = 67/174 (38.51%), Postives = 94/174 (54.02%), Query Frame = 2
Query:    8 LATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSL-DEDQIAANLVKNGPLAVA--INAVYMQTYIGGVSCPYICSR---RLDHGVLLVGYGSAGYAPIRVKEKPYWIIKNSWGESWGENGY 511
            +ATGKL  L+EQQLVDC    +       + GC GGL + AFEY     G+M E+ YPY G D    CK+  SK  A V + + ++L DE+ +   +  + P++ A  + A +M  Y  G+     C +   +++H VL VGYG         K  PYWI+KNSWG +WG  GY
Sbjct:  156 IATGKLPFLAEQQLVDCAQNFN-------NHGCQGGLPSQAFEYIRYNKGIMGEDTYPYRGQDGD--CKYQPSKAIAFVKDVANITLNDEEAMVEAVALHNPVSFAFEVTADFMM-YRKGIYSSTSCHKTPDKVNHAVLAVGYGEE-------KGIPYWIVKNSWGPNWGMKGY 312          
BLAST of CK739463 vs. ExPASy Swiss-Prot
Match: CATV_NPVAP (Viral cathepsin OS=Antheraea pernyi nuclear polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.108e-22
Identity = 62/165 (37.58%), Postives = 91/165 (55.15%), Query Frame = 2
Query:   20 KLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVAN-FSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRVKEKPYWIIKNSWGESWGENGY 511
            +L++LSEQQL+DCD           D GC+GGL+++A+E  +  GG+  E DYPY   +    C+ + +K    V   +  V+L E+++   L   GP+ VAI+A  +  Y  G+   Y  +  L+H VLLVGYG            P+WI+KN+WG  WGE GY
Sbjct:  156 QLINLSEQQLIDCDF---------VDVGCDGGLLHTAYEAVMNMGGIQAENDYPYEANN--GPCRVNAAKFVVRVKKCYRYVTLFEEKLKDLLRIVGPIPVAIDASDIVGYKRGI-IRYCENHGLNHAVLLVGYGVENGI-------PFWILKNTWGADWGEQGY 301          
BLAST of CK739463 vs. ExPASy Swiss-Prot
Match: CATS_BOVIN (Cathepsin S OS=Bos taurus GN=CTSS PE=1 SV=2)

HSP 1 Score: 105.916 bits (263), Expect = 1.108e-22
Identity = 63/171 (36.84%), Postives = 90/171 (52.63%), Query Frame = 2
Query:    8 LATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKN-GPLAVAINAVYMQ--TYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRVKEKPYWIIKNSWGESWGENGY 511
            L TGKLVSLS Q LVDC            + GCNGG M  AF+Y +   G+  E  YPY   D    C++D    AA+ + +  +    ++     V N GP++V I+A +     Y  GV     C++ ++HGVL+VGYG+       +  K YW++KNSWG  +G+ GY
Sbjct:  154 LKTGKLVSLSAQNLVDCS------TAKYGNKGCNGGFMTEAFQYIIDNNGIDSEASYPYKAMD--GKCQYDVKNRAATCSRYIELPFGSEEALKEAVANKGPVSVGIDASHSSFFLYKTGVYYDPSCTQNVNHGVLVVGYGN-------LDGKDYWLVKNSWGLHFGDQGY 309          
BLAST of CK739463 vs. ExPASy Swiss-Prot
Match: CATR_MOUSE (Cathepsin R OS=Mus musculus GN=Ctsr PE=2 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 1.447e-22
Identity = 65/169 (38.46%), Postives = 85/169 (50.30%), Query Frame = 2
Query:   14 TGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVY--MQTYIGGVSCPYICSR-RLDHGVLLVGYGSAGYAPIRVKEKPYWIIKNSWGESWGENGY 511
            TGKL  LS Q LVDC            ++GC GG   +AF+Y L  GGL  E  YPY G D    C+++     A +  F  +   ED + A +   GP+   I+A +   + Y GG+     CS   + HGVL+VGYG  G   I      YW+IKNSWG+ WG  GY
Sbjct:  156 TGKLTPLSVQNLVDCSKP-------QGNNGCLGGDTYNAFQYVLHNGGLESEATYPYEGKDG--PCRYNPKNSKAEITGFVSLPQSEDILMAAVATIGPITAGIDASHESFKNYKGGIYHEPNCSSDTVTHGVLVVGYGFKG---IETDGNHYWLIKNSWGKRWGIRGY 312          
BLAST of CK739463 vs. ExPASy Swiss-Prot
Match: CATK_PIG (Cathepsin K OS=Sus scrofa GN=CTSK PE=2 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 1.447e-22
Identity = 68/170 (40.00%), Postives = 89/170 (52.35%), Query Frame = 2
Query:   14 TGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANF-SVVSLDEDQIAANLVKNGPLAVAINA--VYMQTYIGGVSCPYIC-SRRLDHGVLLVGYGSAGYAPIRVKEKPYWIIKNSWGESWGENGY 511
            TGKL++LS Q LVDC  E D         GC GG M +AF+Y  K  G+  E+ YPY G D    C ++ +  AA    +  +   +E  +   + + GP++VAI+A     Q Y  GV     C S  L+H VL VGYG         K K +WIIKNSWGE+WG  GY
Sbjct:  157 TGKLLNLSPQNLVDCVSEND---------GCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQDEN--CMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDENCNSDNLNHAVLAVGYGIQ-------KGKKHWIIKNSWGENWGNKGY 308          
The following BLAST results are available for this feature:
BLAST of CK739463 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 159
Match NameE-valueIdentityDescription
CATK_MOUSE3.807e-2338.24Cathepsin K OS=Mus musculus GN=Ctsk PE=2 SV=2[more]
CATV_NPVCF4.972e-2335.76Viral cathepsin OS=Choristoneura fumiferana nuclea... [more]
CATV_NPVCD6.493e-2337.58Viral cathepsin OS=Choristoneura fumiferana defect... [more]
CYSP2_MAIZE8.480e-2340.23Cysteine proteinase 2 OS=Zea mays GN=CCP2 PE=2 SV=... [more]
CATH_PIG8.480e-2336.78Cathepsin H OS=Sus scrofa GN=CTSH PE=1 SV=1[more]
CATH_BOVIN8.480e-2338.51Cathepsin H OS=Bos taurus GN=CTSH PE=2 SV=1[more]
CATV_NPVAP1.108e-2237.58Viral cathepsin OS=Antheraea pernyi nuclear polyhe... [more]
CATS_BOVIN1.108e-2236.84Cathepsin S OS=Bos taurus GN=CTSS PE=1 SV=2[more]
CATR_MOUSE1.447e-2238.46Cathepsin R OS=Mus musculus GN=Ctsr PE=2 SV=1[more]
CATK_PIG1.447e-2240.00Cathepsin K OS=Sus scrofa GN=CTSK PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_5925 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE56G06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK739463 ID=CK739463; Name=CK739463; organism=Citrus sinensis; type=EST; length=511bp
TAACTTCCTGGCAACTGGAAAGCTTGTGAGCCTCAGTGAGCAACAGCTTG
TGGATTGCGATCATGAGTGTGATCCTGAGGAACCAGGTTCTTGTGATTCT
GGATGCAATGGTGGGCTTATGAACAGTGCTTTTGAGTACACACTCAAGGC
TGGTGGGCTTATGCGGGAGGAAGACTATCCTTACACCGGCACTGATCGTG
GCCACGCCTGCAAATTCGATAAGAGTAAGATTGCTGCCTCAGTGGCCAAC
TTCAGTGTTGTCTCCCTTGATGAGGATCAAATTGCTGCCAATCTTGTGAA
AAATGGTCCCCTTGCAGTGGCCATCAATGCCGTGTACATGCAGACATACA
TTGGGGGAGTTTCCTGCCCATACATATGCTCGAGGCGATTGGACCATGGA
GTGTTGCTCGTGGGATACGGGTCAGCTGGCTATGCTCCAATCAGGGTGAA
GGAGAAGCCATACTGGATCATCAAGAATTCATGGGGTGAGAGCTGGGGAG
AGAACGGATAC
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