CK739493

Overview
NameCK739493
Unique NameCK739493
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length711
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK739493 vs. ExPASy Swiss-Prot
Match: PER15_ARATH (Peroxidase 15 OS=Arabidopsis thaliana GN=PER15 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.983e-15
Identity = 45/140 (32.14%), Postives = 78/140 (55.71%), Query Frame = 1
Query:    7 SGSHSVGRTHCVKLVHRLYPEV-----DPVLNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQL-ATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 408
            SGSH++G + C     RLY +      D  L   +  ++  +CP +  D    +   N  G     DN+Y++N+++N GL+  D  L ++++++R  VKK A+ Q+ FF++F+ ++  +   +PLTG+ GEIRK C   N
Sbjct:  200 SGSHTIGFSRCTSFRQRLYNQSGNGSPDRTLEQSYAANLRQRCPRSGGDQNLSELDINSAGR---FDNSYFKNLIENMGLLNSDEVLFSSNEQSRELVKKYAEDQEEFFEQFAESMIKMGNISPLTGSSGEIRKNCRKIN 336          
BLAST of CK739493 vs. ExPASy Swiss-Prot
Match: PER14_ARATH (Peroxidase 14 OS=Arabidopsis thaliana GN=PER14 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.590e-15
Identity = 45/140 (32.14%), Postives = 78/140 (55.71%), Query Frame = 1
Query:    7 SGSHSVGRTHCVKLVHRLYPEV-----DPVLNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQL-ATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 408
            SGSH++G + C     RLY +      D  L   +   +  +CP +  D    +   N  G     DN+Y++N+++N GL+  D  L ++++++R  VKK A+ Q+ FF++F+ ++  + + +PLTG+ GEIRK C   N
Sbjct:  199 SGSHTIGFSRCTSFRQRLYNQSGSGSPDTTLEKSYAAILRQRCPRSGGDQNLSELDINSAGR---FDNSYFKNLIENMGLLNSDQVLFSSNEQSRELVKKYAEDQEEFFEQFAESMIKMGKISPLTGSSGEIRKKCRKIN 335          
BLAST of CK739493 vs. ExPASy Swiss-Prot
Match: PER36_ARATH (Peroxidase 36 OS=Arabidopsis thaliana GN=PER36 PE=2 SV=2)

HSP 1 Score: 82.0333 bits (201), Expect = 3.382e-15
Identity = 48/143 (33.57%), Postives = 74/143 (51.75%), Query Frame = 1
Query:   10 GSHSVGRTHCVKLVHRLYPEV-----DPVLNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDK-RTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLANKLHD 420
            GSH++G + C+    RLY        D  LN D+   +   CP +  D         D  TP   DN YY+N+++ +GL+  D  L T    T   VK  A+++  FF++F++++  +   +PLTGT GEIR++C   N  HD
Sbjct:  206 GSHTIGNSRCIGFRQRLYNHTGNNDPDQTLNQDYASMLQQGCPISGNDQNLFNL---DYVTPTKFDNYYYKNLVNFRGLLSSDEILFTQSIETMEMVKYYAENEGAFFEQFAKSMVKMGNISPLTGTDGEIRRICRRVN--HD 343          
BLAST of CK739493 vs. ExPASy Swiss-Prot
Match: PER72_ARATH (Peroxidase 72 OS=Arabidopsis thaliana GN=PER72 PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.418e-15
Identity = 45/140 (32.14%), Postives = 78/140 (55.71%), Query Frame = 1
Query:    7 SGSHSVGRTHCVKLVHRLYPEV-----DPVLNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLAT-DKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 408
            SGSH++G + C     RLY +      D  L+  +   +  +CP +  D         D  TP   DN+Y++N++  KGL+  D  L T +K+++  V+  A++Q+ FF++F++++  +   +PLTG KGEIR++C   N
Sbjct:  197 SGSHTIGNSRCTSFRQRLYNQSGNGKPDMTLSQYYATLLRQRCPRSGGDQTLFFL---DFATPFKFDNHYFKNLIMYKGLLSSDEILFTKNKQSKELVELYAENQEAFFEQFAKSMVKMGNISPLTGAKGEIRRICRRVN 333          
BLAST of CK739493 vs. ExPASy Swiss-Prot
Match: PER29_ARATH (Peroxidase 29 OS=Arabidopsis thaliana GN=PER29 PE=2 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 4.418e-15
Identity = 45/134 (33.58%), Postives = 71/134 (52.99%), Query Frame = 1
Query:   10 GSHSVGRTHCVKLVHRL--YPEVDPVLNPDHVPHMLHKCPDAIPDPKAVQ--YVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCN 399
            G+H++G THC  ++ R          ++P     +   CP+  P  +A +  +V ND+ T ++ D  YY + +  +G + +D ++  D RTRP+V+  A  QD FF  FS A   LS    LTG +G IR VC+
Sbjct:  204 GAHTIGVTHCNNVLSRFDNANATSENMDPRFQTFLRVACPEFSPTSQAAEATFVPNDQ-TSVIFDTAYYDDAIAGRGNLRIDSEIGADPRTRPFVEAFAADQDRFFNAFSSAFVKLSSYKVLTGNEGVIRSVCD 336          
BLAST of CK739493 vs. ExPASy Swiss-Prot
Match: PER37_ARATH (Peroxidase 37 OS=Arabidopsis thaliana GN=PER37 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.679e-14
Identity = 48/142 (33.80%), Postives = 73/142 (51.41%), Query Frame = 1
Query:    7 SGSHSVGRTHCVKLVHRLYPEV-----DPVLNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATD---KRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 408
            SG H+ G+  C  ++ RLY        DP L+  ++  +  +CP        V +   D  TP + DN YY N+ +NKGL+  D +L +      T P V++ A  Q  FF  F++A+  +S  +PLTG +GEIR  C + N
Sbjct:  189 SGGHTFGKNQCQFIMDRLYNFSNTGLPDPTLDKSYLSTLRKQCPRNGNQSVLVDF---DLRTPTLFDNKYYVNLKENKGLIQSDQELFSSPDASDTLPLVREYADGQGKFFDAFAKAMIRMSSLSPLTGKQGEIRLNCRVVN 327          
BLAST of CK739493 vs. ExPASy Swiss-Prot
Match: PER1C_ARMRU (Peroxidase C1C (Fragment) OS=Armoracia rusticana GN=PRXC1C PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.192e-14
Identity = 54/151 (35.76%), Postives = 72/151 (47.68%), Query Frame = 1
Query:    7 SGSHSVGRTHCVKLVHRLYPEV-----DPVLNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQL-----ATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLANK---LHD 420
            SG H+ G+  C  ++ RLY        DP LN  ++  +  +CP        V +   D  TP V DN YY N+ + KGL+  D +L     ATD  T P V+  A     FF  F  A+  +    PLTGT+GEIR  C + N    LHD
Sbjct:  176 SGGHTFGKNQCRFIMDRLYNFSNTGLPDPTLNTTYLQTLRQQCPRNGNQSVLVDF---DLRTPTVFDNKYYVNLKEQKGLIQSDQELFSSPNATD--TIPLVRSYADGTQTFFNAFVEAMNRMGNITPLTGTQGEIRLNCRVVNSNSLLHD 321          
BLAST of CK739493 vs. ExPASy Swiss-Prot
Match: PER54_ARATH (Peroxidase 54 OS=Arabidopsis thaliana GN=PER54 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.863e-14
Identity = 47/141 (33.33%), Postives = 68/141 (48.23%), Query Frame = 1
Query:    7 SGSHSVGRTHCVKLVHRLYP-----EVDPVLNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLA--TDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 408
            SG+H+ GR  CV   +RL+        DP LN   +  +   CP    +         D  TP   DNNY+ N+  N GL+  D +L   T   T P V   A +Q  FF+ F +++  +   +PLTG+ GEIR+ C + N
Sbjct:  197 SGAHTFGRGQCVTFNNRLFNFNGTGNPDPTLNSTLLSSLQQLCPQ---NGSNTGITNLDLSTPDAFDNNYFTNLQSNNGLLQSDQELFSNTGSATVPIVNSFASNQTLFFEAFVQSMIKMGNISPLTGSSGEIRQDCKVVN 334          
BLAST of CK739493 vs. ExPASy Swiss-Prot
Match: PER46_ARATH (Peroxidase 46 OS=Arabidopsis thaliana GN=PER46 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.863e-14
Identity = 45/141 (31.91%), Postives = 69/141 (48.94%), Query Frame = 1
Query:    7 SGSHSVGRTHCVKLVHRL-------YPEVDPVLNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 408
            SG+H++G +HC     R        +  +D  L+  +   +++KC  +      V    ND  T  V DN YYRN+  +KGL   D  L  D RTR  V+++A  ++ FF+ +S +   LS      G  GEIR+ C+  N
Sbjct:  189 SGAHTIGASHCNAFNGRFQRDSKGNFEVIDASLDNSYAETLMNKCSSSESSSLTVS---NDPETSAVFDNQYYRNLETHKGLFQTDSALMEDNRTRTMVEELASDEESFFQRWSESFVKLSMVGVRVGEDGEIRRSCSSVN 326          
BLAST of CK739493 vs. ExPASy Swiss-Prot
Match: PER38_ARATH (Peroxidase 38 OS=Arabidopsis thaliana GN=PER38 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.863e-14
Identity = 49/142 (34.51%), Postives = 72/142 (50.70%), Query Frame = 1
Query:    7 SGSHSVGRTHCVKLVHRLYPE-----VDPVLNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKR---TRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 408
            SG H+ G++ C  ++ RLY        DP L+  ++  +  +CP        V +   D  TP + DN YY N+ +NKGL+  D +L +      T P V+  A  Q  FF  F +AI  +S  +PLTG +GEIR  C + N
Sbjct:  189 SGGHTFGKSQCQFIMDRLYNFGETGLPDPTLDKSYLATLRKQCPRNGNQSVLVDF---DLRTPTLFDNKYYVNLKENKGLIQSDQELFSSPDAADTLPLVRAYADGQGTFFDAFVKAIIRMSSLSPLTGKQGEIRLNCRVVN 327          
The following BLAST results are available for this feature:
BLAST of CK739493 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 68
Match NameE-valueIdentityDescription
PER15_ARATH1.983e-1532.14Peroxidase 15 OS=Arabidopsis thaliana GN=PER15 PE=... [more]
PER14_ARATH2.590e-1532.14Peroxidase 14 OS=Arabidopsis thaliana GN=PER14 PE=... [more]
PER36_ARATH3.382e-1533.57Peroxidase 36 OS=Arabidopsis thaliana GN=PER36 PE=... [more]
PER72_ARATH4.418e-1532.14Peroxidase 72 OS=Arabidopsis thaliana GN=PER72 PE=... [more]
PER29_ARATH4.418e-1533.58Peroxidase 29 OS=Arabidopsis thaliana GN=PER29 PE=... [more]
PER37_ARATH1.679e-1433.80Peroxidase 37 OS=Arabidopsis thaliana GN=PER37 PE=... [more]
PER1C_ARMRU2.192e-1435.76Peroxidase C1C (Fragment) OS=Armoracia rusticana G... [more]
PER54_ARATH2.863e-1433.33Peroxidase 54 OS=Arabidopsis thaliana GN=PER54 PE=... [more]
PER46_ARATH2.863e-1431.91Peroxidase 46 OS=Arabidopsis thaliana GN=PER46 PE=... [more]
PER38_ARATH2.863e-1434.51Peroxidase 38 OS=Arabidopsis thaliana GN=PER38 PE=... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_6331 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE62B01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK739493 ID=CK739493; Name=CK739493; organism=Citrus sinensis; type=EST; length=711bp
ATTCCATCAGGATCTCACAGTGTTGGCAGAACTCATTGTGTGAAGCTGGT
GCACCGTCTGTACCCAGAAGTTGACCCTGTACTGAACCCTGACCATGTTC
CGCATATGCTCCATAAGTGTCCTGATGCAATCCCAGACCCCAAGGCTGTT
CAGTATGTGAGGAATGACCGTGGCACACCCATGGTGCTGGACAACAACTA
CTATAGGAACATATTGGACAACAAGGGCTTGATGATGGTTGATCATCAGC
TAGCCACCGACAAGAGGACAAGACCTTATGTTAAGAAGATGGCCAAGAGT
CAAGACTACTTCTTCAAGGAATTTTCAAGAGCCATTACTCTCCTTTCTGA
GAACAACCCTCTCACAGGTACAAAGGGTGAGATCCGAAAGGTTTGCAATC
TTGCCAACAAGCTCCACGACAAGTCCTAGCTAGCTAACAGCTGTATTAGC
TACAACAAGTTAATAGCTCCAAATTTTTCTTCCTTGTTTCTTCTATGAGG
AAGAAAAGAGTGTGAGATGAGCTCCCAATAAGATGGTTTTTCTAGATCGG
TTTGTTTCCTGTGAGATGTTCGTATTACTGCTATTATGTTCCTTAGATGT
ACCGTCCAATGTTTAAGCCTAGGCTTTCCTTTTCCTCGATGGTGTGAGCT
TGATGTTATTAATATTCAGTAATGGCAGTGGTAGATGAGGGATGTATGTA
TGTATGCAGGG
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