CK739493

Overview
NameCK739493
Unique NameCK739493
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length711
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK739493 vs. ExPASy Swiss-Prot
Match: PER65_ARATH (Peroxidase 65 OS=Arabidopsis thaliana GN=PER65 PE=2 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 1.856e-13
Identity = 44/138 (31.88%), Postives = 69/138 (50.00%), Query Frame = 1
Query:    7 SGSHSVGRTHCVKLVHRLY-PEVDPVLNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLANKLH 417
            SG+H++G +HC +   RLY    D  +NP     +   C +   D     +  ND  TP   DN Y++N+    GL+  DH L  D  T+P+V   A ++  FF++F+RA+  L          GE+R+ C+  N L+
Sbjct:  198 SGAHTIGFSHCKEFSDRLYGSRADKEINPRFAAALKDLCKNHTVDDTIAAF--NDVMTPGKFDNMYFKNLKRGLGLLASDHILIKDNSTKPFVDLYATNETAFFEDFARAMEKLGTVGVKGDKDGEVRRRCDHFNNLN 333          
BLAST of CK739493 vs. ExPASy Swiss-Prot
Match: PER1_ORYSJ (Peroxidase 1 OS=Oryza sativa subsp. japonica GN=PRX74 PE=2 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 1.856e-13
Identity = 44/144 (30.56%), Postives = 72/144 (50.00%), Query Frame = 1
Query:    7 SGSHSVGRTHCVKLVHRLYP--------EVDPVLNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKS--QDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 408
            S  H++G +HC     RLY         ++DP L   ++  +  KC     +   V+    D G+    D  Y++N+   +GL   D +L T+  TR YV++ A    +D FF +F+ ++  +     LTG++GEIRK CN+ N
Sbjct:  186 SAGHTIGTSHCFSFTDRLYNFTGLDNAHDIDPTLELQYMARLRSKCTSLQDNTTLVEM---DPGSFKTFDLGYFKNVAKRRGLFHSDGELLTNGFTRAYVQRHAGGGYKDEFFADFAASMVKMGGVEVLTGSQGEIRKKCNVVN 326          
BLAST of CK739493 vs. ExPASy Swiss-Prot
Match: PER1A_ARMRU (Peroxidase C1A OS=Armoracia rusticana GN=PRXC1A PE=1 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 1.856e-13
Identity = 53/151 (35.10%), Postives = 72/151 (47.68%), Query Frame = 1
Query:    7 SGSHSVGRTHCVKLVHRLYPEV-----DPVLNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQL-----ATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLANK---LHD 420
            SG H+ G+  C  ++ RLY        DP LN  ++  +   CP    +      V  D  TP + DN YY N+ + KGL+  D +L     ATD  T P V+  A S   FF  F  A+  +    PLTGT+G+IR  C + N    LHD
Sbjct:  197 SGGHTFGKNQCRFIMDRLYNFSNTGLPDPTLNTTYLQTLRGLCP---LNGNLSALVDFDLRTPTIFDNKYYVNLEEQKGLIQSDQELFSSPNATD--TIPLVRSFANSTQTFFNAFVEAMDRMGNITPLTGTQGQIRLNCRVVNSNSLLHD 342          
BLAST of CK739493 vs. ExPASy Swiss-Prot
Match: PER17_ARATH (Peroxidase 17 OS=Arabidopsis thaliana GN=PER17 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.424e-13
Identity = 46/141 (32.62%), Postives = 71/141 (50.35%), Query Frame = 1
Query:    7 SGSHSVGRTHCVKLVHRLYPEV-----DPVLNPDHVPHMLHKCPDAIPDPKAVQYVRNDR-GTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLANK 411
            SGSHS+G+  C  ++ RLY +      DP L P +   +   CP         + V  D   TP V DN Y+++++  +G +  D  L T+  TR YVK  ++ QD FF+ F+  +  L +    +G  GEIR  C + N+
Sbjct:  187 SGSHSIGQGRCFSIMFRLYNQSGSGKPDPALEPSYRKKLDKLCPLG-----GDENVTGDLDATPQVFDNQYFKDLVSGRGFLNSDQTLYTNLVTREYVKMFSEDQDEFFRAFAEGMVKLGDLQ--SGRPGEIRFNCRVVNR 320          
BLAST of CK739493 vs. ExPASy Swiss-Prot
Match: PERE5_ARMRU (Peroxidase E5 OS=Armoracia rusticana GN=HRPE5 PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.166e-13
Identity = 47/141 (33.33%), Postives = 68/141 (48.23%), Query Frame = 1
Query:    7 SGSHSVGRTHCVKLVHRLYP-----EVDPVLNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKR--TRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 408
            SG H+ GR  C+ +  RLY        DP LNP ++  +   CP    +      V  D  TP   DN +Y N+ + KGL+  D +L +     T P V   + +   FF  F+ A+  +    PLTGT+GEIR+ C + N
Sbjct:  167 SGGHTFGRARCLFVTARLYNFNGTNRPDPTLNPSYLADLRRLCPR---NGNGTVLVNFDVMTPNTFDNQFYTNLRNGKGLIQSDQELFSTPGADTIPLVNLYSSNTLSFFGAFADAMIRMGNLRPLTGTQGEIRQNCRVVN 304          
BLAST of CK739493 vs. ExPASy Swiss-Prot
Match: PER16_ARATH (Peroxidase 16 OS=Arabidopsis thaliana GN=PER16 PE=1 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 4.135e-13
Identity = 46/139 (33.09%), Postives = 66/139 (47.48%), Query Frame = 1
Query:    7 SGSHSVGRTHCVKLVHRLYP-----EVDPVLNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 408
            SG+H++G  HC K   R+Y       +DP LN  +   +   CP  +    A+     D  +P   DN Y++N+    GL   D  L +D+R+R  V   A S+  F + F  AIT L      TG  GEIR+ C+  N
Sbjct:  188 SGAHTIGFAHCGKFSKRIYNFSPKRPIDPTLNIRYALQLRQMCPIRVDLRIAINM---DPTSPNTFDNAYFKNLQKGMGLFTSDQVLFSDERSRSTVNSFASSEATFRQAFISAITKLGRVGVKTGNAGEIRRDCSRVN 323          
BLAST of CK739493 vs. ExPASy Swiss-Prot
Match: PER23_ARATH (Peroxidase 23 OS=Arabidopsis thaliana GN=PER23 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.400e-13
Identity = 47/141 (33.33%), Postives = 66/141 (46.81%), Query Frame = 1
Query:    7 SGSHSVGRTHCVKLVHRLYP-----EVDPVLNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKR--TRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 408
            SG H+ G+  C  +  RLY        DP LNP ++  +   CP    +      V  D  TP   D  YY N+L+ KGL+  D  L +     T P V + + +   FF  F  A+  +    PLTGT+GEIR+ C + N
Sbjct:  196 SGGHTFGKAQCQFVTPRLYNFNGTNRPDPSLNPTYLVELRRLCPQ---NGNGTVLVNFDSVTPTTFDRQYYTNLLNGKGLIQSDQVLFSTPGADTIPLVNQYSSNTFVFFGAFVDAMIRMGNLKPLTGTQGEIRQNCRVVN 333          
BLAST of CK739493 vs. ExPASy Swiss-Prot
Match: PER5_ARATH (Peroxidase 5 OS=Arabidopsis thaliana GN=PER5 PE=2 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 7.053e-13
Identity = 43/135 (31.85%), Postives = 68/135 (50.37%), Query Frame = 1
Query:    7 SGSHSVGRTHCVKLVHRLYPEVDPVLNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQL-ATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 408
            SG+H++G++ C     RLY E    ++         +CP    D         D  TP   DNNYY+N++  KGL++ D  L  +   T   V + +K++  F  +F+ A+  +    PLTG+ GEIRK+C+  N
Sbjct:  191 SGAHTIGQSQCFLFRDRLY-ENSSDIDAGFASTRKRRCPTVGGDGNLAAL---DLVTPNSFDNNYYKNLMQKKGLLVTDQVLFGSGASTDGIVSEYSKNRSKFAADFATAMIKMGNIEPLTGSNGEIRKICSFVN 321          
BLAST of CK739493 vs. ExPASy Swiss-Prot
Match: PER35_ARATH (Peroxidase 35 OS=Arabidopsis thaliana GN=PER35 PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 7.053e-13
Identity = 45/139 (32.37%), Postives = 65/139 (46.76%), Query Frame = 1
Query:    7 SGSHSVGRTHCVKLVHRLYP-----EVDPVLNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 408
            S +H++G  HC K+  R++       VDP LN  +   +   CP  + DP+    +  D  TP   DN Y++N+   KGL   D  L TD R+RP V   A +   F + F  A+T L        + G IR+ C   N
Sbjct:  194 SAAHTLGFAHCGKVFKRIHKFNGINSVDPTLNKAYAIELQKACPKNV-DPRIA--INMDPVTPKTFDNTYFKNLQQGKGLFTSDQVLFTDGRSRPTVNAWASNSTAFNRAFVIAMTKLGRVGVKNSSNGNIRRDCGAFN 329          
BLAST of CK739493 vs. ExPASy Swiss-Prot
Match: PER2_ARMRU (Peroxidase C2 OS=Armoracia rusticana GN=PRXC2 PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 9.211e-13
Identity = 46/142 (32.39%), Postives = 69/142 (48.59%), Query Frame = 1
Query:    7 SGSHSVGRTHCVKLVHRLYP-----EVDPVLNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATD---KRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 408
            SG H+ G+  C  ++ RLY      + DP L+  ++  +  +CP    +      V  D  TP + DN YY N+ +NKGL+  D +L +      T P V+  A  Q  FF  F  A+  +   +P TG +GEIR  C + N
Sbjct:  191 SGGHTFGKNQCQFIMDRLYNFSNSGKPDPTLDKSYLSTLRKQCPR---NGNLSVLVDFDLRTPTIFDNKYYVNLKENKGLIQSDQELFSSPDASDTIPLVRAYADGQGKFFDAFVEAMIRMGNLSPSTGKQGEIRLNCRVVN 329          
The following BLAST results are available for this feature:
BLAST of CK739493 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 68
Match NameE-valueIdentityDescription
PER65_ARATH1.856e-1331.88Peroxidase 65 OS=Arabidopsis thaliana GN=PER65 PE=... [more]
PER1_ORYSJ1.856e-1330.56Peroxidase 1 OS=Oryza sativa subsp. japonica GN=PR... [more]
PER1A_ARMRU1.856e-1335.10Peroxidase C1A OS=Armoracia rusticana GN=PRXC1A PE... [more]
PER17_ARATH2.424e-1332.62Peroxidase 17 OS=Arabidopsis thaliana GN=PER17 PE=... [more]
PERE5_ARMRU3.166e-1333.33Peroxidase E5 OS=Armoracia rusticana GN=HRPE5 PE=1... [more]
PER16_ARATH4.135e-1333.09Peroxidase 16 OS=Arabidopsis thaliana GN=PER16 PE=... [more]
PER23_ARATH5.400e-1333.33Peroxidase 23 OS=Arabidopsis thaliana GN=PER23 PE=... [more]
PER5_ARATH7.053e-1331.85Peroxidase 5 OS=Arabidopsis thaliana GN=PER5 PE=2 ... [more]
PER35_ARATH7.053e-1332.37Peroxidase 35 OS=Arabidopsis thaliana GN=PER35 PE=... [more]
PER2_ARMRU9.211e-1332.39Peroxidase C2 OS=Armoracia rusticana GN=PRXC2 PE=3... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_6331 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE62B01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK739493 ID=CK739493; Name=CK739493; organism=Citrus sinensis; type=EST; length=711bp
ATTCCATCAGGATCTCACAGTGTTGGCAGAACTCATTGTGTGAAGCTGGT
GCACCGTCTGTACCCAGAAGTTGACCCTGTACTGAACCCTGACCATGTTC
CGCATATGCTCCATAAGTGTCCTGATGCAATCCCAGACCCCAAGGCTGTT
CAGTATGTGAGGAATGACCGTGGCACACCCATGGTGCTGGACAACAACTA
CTATAGGAACATATTGGACAACAAGGGCTTGATGATGGTTGATCATCAGC
TAGCCACCGACAAGAGGACAAGACCTTATGTTAAGAAGATGGCCAAGAGT
CAAGACTACTTCTTCAAGGAATTTTCAAGAGCCATTACTCTCCTTTCTGA
GAACAACCCTCTCACAGGTACAAAGGGTGAGATCCGAAAGGTTTGCAATC
TTGCCAACAAGCTCCACGACAAGTCCTAGCTAGCTAACAGCTGTATTAGC
TACAACAAGTTAATAGCTCCAAATTTTTCTTCCTTGTTTCTTCTATGAGG
AAGAAAAGAGTGTGAGATGAGCTCCCAATAAGATGGTTTTTCTAGATCGG
TTTGTTTCCTGTGAGATGTTCGTATTACTGCTATTATGTTCCTTAGATGT
ACCGTCCAATGTTTAAGCCTAGGCTTTCCTTTTCCTCGATGGTGTGAGCT
TGATGTTATTAATATTCAGTAATGGCAGTGGTAGATGAGGGATGTATGTA
TGTATGCAGGG
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