CK739493

Overview
NameCK739493
Unique NameCK739493
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length711
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK739493 vs. ExPASy Swiss-Prot
Match: PERA2_ARMRU (Peroxidase A2 OS=Armoracia rusticana GN=HRPA2 PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.737e-11
Identity = 44/137 (32.12%), Postives = 65/137 (47.45%), Query Frame = 1
Query:    7 SGSHSVGRTHCVKLVHRLYP-----EVDPVLNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATD--KRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVC 396
            SG+H+ GR  C    +RL+        DP LN   +  +   CP    +  A      D  TP   DNNY+ N+  N GL+  D +L +     T   V   A +Q  FF+ F++++  +   +PLTG+ GEIR  C
Sbjct:  166 SGAHTFGRARCGVFNNRLFNFSGTNGPDPTLNSTLLSSLQQLCPQ---NGSASTITNLDLSTPDAFDNNYFANLQSNNGLLQSDQELFSTLGSATIAVVTSFASNQTLFFQAFAQSMINMGNISPLTGSNGEIRLDC 299          
BLAST of CK739493 vs. ExPASy Swiss-Prot
Match: PER48_ARATH (Putative Peroxidase 48 OS=Arabidopsis thaliana GN=PER48 PE=2 SV=3)

HSP 1 Score: 69.3218 bits (168), Expect = 2.269e-11
Identity = 48/169 (28.40%), Postives = 72/169 (42.60%), Query Frame = 1
Query:   10 GSHSVGRTHCVKLVHRLYP-----EVDPVLNPDHVPHMLHKCPDAI--------PD------------------------PKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLA 405
            G+HS+G THC    +RLY      + DP LNP  +  +  KCP ++        PD                         + +    N+ G        Y+R ++ NKGLM  D QL   + T  +V+  A     F +EF+ ++  LS  N LTG  G++R  C+ A
Sbjct:  232 GAHSIGITHCTFFKNRLYNFSATGKPDPELNPGFLQELKTKCPFSVSTSSPSAPPDIGLPPSLPASDSENSYGMSSGNRNDEVIDLSYNNEGGDENFGTRYFRRLMQNKGLMSSDQQLMGSEVTEMWVRAYASDPLLFRREFAMSMMKLSSYNVLTGPLGQVRTSCSKA 400          
BLAST of CK739493 vs. ExPASy Swiss-Prot
Match: PER25_ARATH (Peroxidase 25 OS=Arabidopsis thaliana GN=PER25 PE=2 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 2.963e-11
Identity = 42/143 (29.37%), Postives = 70/143 (48.95%), Query Frame = 1
Query:   10 GSHSVGRTHCVKLVHRLYP-----EVDPVLNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQD-----YFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 408
            G+H++G+T C+   +RLY        DP ++P  +  +   CP   P+    + V  D G+P   D ++++N+ D   ++  D +L +D  T   VKK A          F  EF +A+  +S  +  T   GE+RKVC+  N
Sbjct:  189 GAHTIGQTDCLFFRYRLYNFTVTGNSDPTISPSFLTQLKTLCP---PNGDGSKRVALDIGSPSKFDESFFKNLRDGNAILESDQRLWSDAETNAVVKKYASRLRGLLGFRFDYEFGKAMIKMSSIDVKTDVDGEVRKVCSKVN 328          
BLAST of CK739493 vs. ExPASy Swiss-Prot
Match: PER1_MAIZE (Peroxidase 1 OS=Zea mays GN=PER1 PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.963e-11
Identity = 42/142 (29.58%), Postives = 66/142 (46.48%), Query Frame = 1
Query:    7 SGSHSVGRTHCVKLVHRLYPE--------VDPVLNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 408
            SG+H+VGR+ C     R++          VD  L+P +   +   CP        +     D GTP VLDNNYY+ +    GL   D+QL  + +    V   A ++  + ++F+ A+  +      TGT GE+R  C + N
Sbjct:  199 SGAHTVGRSFCASFFKRVWNTSTNPATAIVDAGLSPSYAQLLRALCPSNTTQTTPITTAM-DPGTPNVLDNNYYKLLPRGMGLFFSDNQLRVNPQMAALVSSFASNETLWKEKFAAAMVKMGRIQVQTGTCGEVRLNCGVVN 339          
BLAST of CK739493 vs. ExPASy Swiss-Prot
Match: PER15_IPOBA (Peroxidase 15 OS=Ipomoea batatas GN=pod PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.963e-11
Identity = 43/141 (30.50%), Postives = 64/141 (45.39%), Query Frame = 1
Query:    7 SGSHSVGRTHCVKLVHRLYP-----EVDPVLNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQL--ATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 408
            SG+H+ GR  C     RL+        DP LN  ++  +   CP              D  TP   DNNY+ N+  N+GL+  D +L   +   T   V   + +Q  FF+ F +++  +   +PLTG+ GEIR  C   N
Sbjct:  190 SGAHTFGRAQCRTFSPRLFNFSNTGNPDPTLNTTYLATLQQICPQG---GSGFTVTNLDPTTPDTFDNNYFSNLQTNRGLLQSDQELFSTSGAPTIAIVNNFSANQTAFFESFVQSMINMGNISPLTGSNGEIRSNCRRPN 327          
BLAST of CK739493 vs. ExPASy Swiss-Prot
Match: PER56_ARATH (Peroxidase 56 OS=Arabidopsis thaliana GN=PER56 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.870e-11
Identity = 40/140 (28.57%), Postives = 66/140 (47.14%), Query Frame = 1
Query:    7 SGSHSVGRTHCVKLVHRLYP-----EVDPVLNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQ-DYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 408
            SG H++G  HC ++ +RLY      + DP L+ ++   +  KC            +  D G+    D +Y++ +   +GL   D  L  ++ T+ YV K   S    FFK+F  ++  +     LTG  GE+RK C + N
Sbjct:  194 SGGHTIGNGHCPQITNRLYNFTGKGDSDPNLDTEYAVKLRGKCKPT----DTTTALEMDPGSFKTFDESYFKLVSQRRGLFQSDAALLDNQETKSYVLKSLNSDGSTFFKDFGVSMVKMGRIGVLTGQVGEVRKKCRMVN 329          
BLAST of CK739493 vs. ExPASy Swiss-Prot
Match: PER52_ARATH (Peroxidase 52 OS=Arabidopsis thaliana GN=PER52 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.870e-11
Identity = 40/134 (29.85%), Postives = 64/134 (47.76%), Query Frame = 1
Query:    7 SGSHSVGRTHCVKLVHRLYPEVDPVLNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 408
            SG+H++G++ C     R+Y E +  +N          CP A            D  T    DNNY++N++  +GL+  D  L     T   V+  + +   F  +F+ A+  + + +PLTG+ GEIRKVC   N
Sbjct:  194 SGAHTIGQSRCTNFRARIYNETN--INAAFATTRQRTCPRASGSGDG-NLAPLDVTTAASFDNNYFKNLMTQRGLLHSDQVLFNGGSTDSIVRGYSNNPSSFNSDFTAAMIKMGDISPLTGSSGEIRKVCGRTN 324          
BLAST of CK739493 vs. ExPASy Swiss-Prot
Match: PER1_ARAHY (Cationic peroxidase 1 OS=Arachis hypogaea GN=PNC1 PE=1 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 3.870e-11
Identity = 41/134 (30.60%), Postives = 62/134 (46.27%), Query Frame = 1
Query:    7 SGSHSVGRTHCVKLVHRLYPEVDPVLNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 408
            SG+H++G+  C     R+Y E +  ++P +   +   CP    D     +   D  TP   DN YY N+ + KGL+  D QL     T   V   + +   F  +F  A+  +   +PLTGT G+IR  C   N
Sbjct:  188 SGAHTIGQAQCTAFRTRIYNESN--IDPTYAKSLQANCPSVGGDTNLSPF---DVTTPNKFDNAYYINLRNKKGLLHSDQQLFNGVSTDSQVTAYSNNAATFNTDFGNAMIKMGNLSPLTGTSGQIRTNCRKTN 316          
BLAST of CK739493 vs. ExPASy Swiss-Prot
Match: PERX_LUPPO (Peroxidase (Fragment) OS=Lupinus polyphyllus PE=2 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 5.054e-11
Identity = 40/134 (29.85%), Postives = 68/134 (50.75%), Query Frame = 1
Query:    7 SGSHSVGRTHCVKLVHRLYPEVDPVLNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 408
            SG H++G++ C     R+Y + +  ++ +        CP +      +  +  D  TP   DNNYY++++ N+GL+  D  L         V+  + +   FF +F+ AI  +S+ +PLTG  GEIRK C + N
Sbjct:   29 SGGHTIGQSECQFFKTRIYNDTN--IDTNFATSRQANCPFSAGGETNLAPL--DSLTPNRFDNNYYKDLVSNRGLLHSDQVLFNGGSQDTLVRTYSTNNVKFFSDFAAAIVKMSKISPLTGIAGEIRKNCRVIN 158          
BLAST of CK739493 vs. ExPASy Swiss-Prot
Match: PER57_ARATH (Peroxidase 57 OS=Arabidopsis thaliana GN=PER57 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.054e-11
Identity = 39/138 (28.26%), Postives = 71/138 (51.45%), Query Frame = 1
Query:   10 GSHSVGRTHCVKLVHRLYP-----EVDPVLNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 408
            G+H+VG+ +C     R+         DP ++P  V  + + C ++            D+ +P+  DN +++ I   +G++ VD +LA+D +TR  V + A +  +F ++F RA+  +   + LTG  GEIR+ C   N
Sbjct:  183 GAHTVGQGNCGLFSDRITSFQGTGRPDPSMDPALVTSLRNTCRNSAT-------AALDQSSPLRFDNQFFKQIRKRRGVLQVDQRLASDPQTRGIVARYANNNAFFKRQFVRAMVKMGAVDVLTGRNGEIRRNCRRFN 313          
The following BLAST results are available for this feature:
BLAST of CK739493 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 68
Match NameE-valueIdentityDescription
PERA2_ARMRU1.737e-1132.12Peroxidase A2 OS=Armoracia rusticana GN=HRPA2 PE=1... [more]
PER48_ARATH2.269e-1128.40Putative Peroxidase 48 OS=Arabidopsis thaliana GN=... [more]
PER25_ARATH2.963e-1129.37Peroxidase 25 OS=Arabidopsis thaliana GN=PER25 PE=... [more]
PER1_MAIZE2.963e-1129.58Peroxidase 1 OS=Zea mays GN=PER1 PE=1 SV=1[more]
PER15_IPOBA2.963e-1130.50Peroxidase 15 OS=Ipomoea batatas GN=pod PE=1 SV=1[more]
PER56_ARATH3.870e-1128.57Peroxidase 56 OS=Arabidopsis thaliana GN=PER56 PE=... [more]
PER52_ARATH3.870e-1129.85Peroxidase 52 OS=Arabidopsis thaliana GN=PER52 PE=... [more]
PER1_ARAHY3.870e-1130.60Cationic peroxidase 1 OS=Arachis hypogaea GN=PNC1 ... [more]
PERX_LUPPO5.054e-1129.85Peroxidase (Fragment) OS=Lupinus polyphyllus PE=2 ... [more]
PER57_ARATH5.054e-1128.26Peroxidase 57 OS=Arabidopsis thaliana GN=PER57 PE=... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_6331 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE62B01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK739493 ID=CK739493; Name=CK739493; organism=Citrus sinensis; type=EST; length=711bp
ATTCCATCAGGATCTCACAGTGTTGGCAGAACTCATTGTGTGAAGCTGGT
GCACCGTCTGTACCCAGAAGTTGACCCTGTACTGAACCCTGACCATGTTC
CGCATATGCTCCATAAGTGTCCTGATGCAATCCCAGACCCCAAGGCTGTT
CAGTATGTGAGGAATGACCGTGGCACACCCATGGTGCTGGACAACAACTA
CTATAGGAACATATTGGACAACAAGGGCTTGATGATGGTTGATCATCAGC
TAGCCACCGACAAGAGGACAAGACCTTATGTTAAGAAGATGGCCAAGAGT
CAAGACTACTTCTTCAAGGAATTTTCAAGAGCCATTACTCTCCTTTCTGA
GAACAACCCTCTCACAGGTACAAAGGGTGAGATCCGAAAGGTTTGCAATC
TTGCCAACAAGCTCCACGACAAGTCCTAGCTAGCTAACAGCTGTATTAGC
TACAACAAGTTAATAGCTCCAAATTTTTCTTCCTTGTTTCTTCTATGAGG
AAGAAAAGAGTGTGAGATGAGCTCCCAATAAGATGGTTTTTCTAGATCGG
TTTGTTTCCTGTGAGATGTTCGTATTACTGCTATTATGTTCCTTAGATGT
ACCGTCCAATGTTTAAGCCTAGGCTTTCCTTTTCCTCGATGGTGTGAGCT
TGATGTTATTAATATTCAGTAATGGCAGTGGTAGATGAGGGATGTATGTA
TGTATGCAGGG
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