CK739589
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK739589 vs. ExPASy Swiss-Prot
Match: CB2_MALDO (Chlorophyll a-b binding protein AB10, chloroplastic OS=Malus domestica PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 2.635e-14 Identity = 61/156 (39.10%), Postives = 81/156 (51.92%), Query Frame = 3 Query: 6 RECELIHGRWAMLATLGALTVEWLTGI-------TWQDAGKVELVEGS-SYLGQPLPFSITTLIWI---EVLVIGYIEFQRNSE------LDPEKRLYPGGKFFDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAVVTGKGPLNNWATHL 422 RE E+IH R AM A LG + E L+ + W AG EG YLG P +++ I +V+++G +E R + DP LYPG FD LGLA D E A L++ E+K+ RLAM + GF VQA+V+ K L N A HL Sbjct: 99 RELEVIHSRCAMSAALGCIFPELLSVMGQGFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWTTKVILMGAVEGYRIARGPLGEVTDP---LYPGS--FDSLGLAEDTEAFAELKVKELKNGRLAMFSMFGFFVQAIVSRKDRLENLADHL 249
BLAST of CK739589 vs. ExPASy Swiss-Prot
Match: CB120_HORVU (Chlorophyll a-b binding protein 1B-20, chloroplastic (Fragment) OS=Hordeum vulgare GN=LHC Ib-20 PE=1 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.889e-12 Identity = 55/165 (33.33%), Postives = 77/165 (46.67%), Query Frame = 3 Query: 3 FRECELIHGRWAMLATLGALTVEWLTGITWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQR-----------------NSELDPEKRLYPGGKFFDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAVVTGKGPLNNWATHLSDPLHTTI 446 F + ++++GRWAML G L E LT AG + E G+ F+ ++ + Y+E +R + L P + YPG + F+PL A K+ E+ + RLAM+AFLGF VQ V GKGP N HL+DP H TI Sbjct: 71 FVQADVVNGRWAMLGVAGMLIPEVLT-----KAGLMNAPEWLRLPGKETYFASSSTALRVHMSSTYVEIRRWQDIKNPGSVNQDPIFKSYSLPPHECGYPG-RVFNPLNFAPLENKEK-----ELANGRLAMLAFLGFLVQHNVHGKGPFENLQQHLADPWHNTI 224
BLAST of CK739589 vs. ExPASy Swiss-Prot
Match: LH18_EUGGR (Light-harvesting complex I LH38 proteins (Fragment) OS=Euglena gracilis PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 5.495e-12 Identity = 55/149 (36.91%), Postives = 70/149 (46.98%), Query Frame = 3 Query: 6 RECELIHGRWAMLATLGALTVEWLTGITWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQRN-SELDPEKRLYPGGKFFDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAVVTGKGPLNNWATHLSDPLHTTIS 449 R E+ HGR AMLA +GAL ++L W +A + ++ +G + I G E R E +YPG FDPL L D K+A EIK+ RLA+ A LGF VQ V G PL N A HL PL I+ Sbjct: 41 RIAEVYHGRLAMLAVVGALVPDYLGKGIWYEAAQ------NAGIG-------LKEVAIFTAAYGVFEVARGVKENSDPTTIYPG---FDPLNLTTDYTKEA-----EIKNGRLALTALLGFEVQRHVVGGSPLANLAEHLQQPLQRNIA 168 HSP 2 Score: 68.5514 bits (166), Expect = 2.088e-11 Identity = 52/148 (35.14%), Postives = 73/148 (49.32%), Query Frame = 3 Query: 6 RECELIHGRWAMLATLGALTVEWLTGITWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQRNSELDPEKRLYPGGKFFDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAVVTGKGPLNNWATHLSDPLHTTIS 449 R E+ HGR AML T+G + E L W +AG + V+G + + T W G +Q+ ELD R YPG FDPL L D + A E+K+ RLA+ A G Q + TG+ PL N + HL++P+ I+ Sbjct: 226 RVAEVFHGRLAMLCTVGCIVPELLGKGAWFEAG--DSVDGLKLGFITMAIAAPTEYWRGQ---GGFNWQKG-ELD---RSYPG---FDPLNLTTDYTRAA-----EVKNGRLALTAVAGLTAQYLATGESPLANLSAHLANPIGANIT 356 The following BLAST results are available for this feature:
BLAST of CK739589 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 83
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Sequences
The
following sequences are available for this feature:
EST sequence >CK739589 ID=CK739589; Name=CK739589; organism=Citrus sinensis; type=EST; length=525bpback to top |