CK739596
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK739596 vs. ExPASy Swiss-Prot
Match: CB22_ARATH (Chlorophyll a-b binding protein 2, chloroplastic OS=Arabidopsis thaliana GN=CAB2A PE=1 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 2.998e-12 Identity = 44/91 (48.35%), Postives = 54/91 (59.34%), Query Frame = 3 Query: 48 WA-DIIKPGCVNTDPIFPNNKL-TGTDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLIAHLAD 314 WA +I G V + N L D+ YPGG FDPLG + PE EL+ KE+KNGRLAM ++ G + Q I TG GPI+NL HLAD Sbjct: 162 WATQVILMGAVEGYRVAGNGPLGEAEDLLYPGGS-FDPLGLAT-DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLAD 250
BLAST of CK739596 vs. ExPASy Swiss-Prot
Match: CB21_ARATH (Chlorophyll a-b binding protein 165/180, chloroplastic OS=Arabidopsis thaliana GN=LHCP-A PE=1 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 2.998e-12 Identity = 44/91 (48.35%), Postives = 54/91 (59.34%), Query Frame = 3 Query: 48 WA-DIIKPGCVNTDPIFPNNKL-TGTDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLIAHLAD 314 WA +I G V + N L D+ YPGG FDPLG + PE EL+ KE+KNGRLAM ++ G + Q I TG GPI+NL HLAD Sbjct: 162 WATQVILMGAVEGYRVAGNGPLGEAEDLLYPGGS-FDPLGLAT-DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLAD 250
BLAST of CK739596 vs. ExPASy Swiss-Prot
Match: CB23_TOBAC (Chlorophyll a-b binding protein 36, chloroplastic OS=Nicotiana tabacum GN=CAB36 PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 3.916e-12 Identity = 38/67 (56.72%), Postives = 44/67 (65.67%), Query Frame = 3 Query: 114 GTDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLIAHLAD 314 G D YPGG FDPLG PE EL+ KEIKNGRLAM ++ G + Q I TG GPI+NL H+AD Sbjct: 184 GLDKIYPGGA-FDPLGLAD-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLFDHVAD 248
BLAST of CK739596 vs. ExPASy Swiss-Prot
Match: CB21_LEMGI (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Lemna gibba PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 3.916e-12 Identity = 38/67 (56.72%), Postives = 44/67 (65.67%), Query Frame = 3 Query: 114 GTDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLIAHLAD 314 G D YPGG FDPLG PE EL+ KEIKNGRLAM ++ G + Q I TG GPI+NL H+AD Sbjct: 183 GLDPLYPGGA-FDPLGLAD-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHIAD 247
BLAST of CK739596 vs. ExPASy Swiss-Prot
Match: CB21_GOSHI (Chlorophyll a-b binding protein 151, chloroplastic OS=Gossypium hirsutum GN=CAB-151 PE=2 SV=2) HSP 1 Score: 70.0922 bits (170), Expect = 3.916e-12 Identity = 38/67 (56.72%), Postives = 44/67 (65.67%), Query Frame = 3 Query: 114 GTDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLIAHLAD 314 G D YPGG FDPLG P+ EL+ KEIKNGRLAM ++ G + Q I TG GPI+NL HLAD Sbjct: 184 GLDPIYPGGA-FDPLGLAD-DPDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLFDHLAD 248
BLAST of CK739596 vs. ExPASy Swiss-Prot
Match: CB26_PETSP (Chlorophyll a-b binding protein 37, chloroplastic OS=Petunia sp. GN=CAB37 PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 5.114e-12 Identity = 38/67 (56.72%), Postives = 44/67 (65.67%), Query Frame = 3 Query: 114 GTDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLIAHLAD 314 G D YPGG FDPLG PE EL+ KEIKNGRLAM ++ G + Q I TG GPI+NL H+AD Sbjct: 184 GLDKIYPGGA-FDPLGLAD-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHVAD 248
BLAST of CK739596 vs. ExPASy Swiss-Prot
Match: CB25_SOLLC (Chlorophyll a-b binding protein 5, chloroplastic (Fragment) OS=Solanum lycopersicum GN=CAB5 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 5.114e-12 Identity = 38/67 (56.72%), Postives = 44/67 (65.67%), Query Frame = 3 Query: 114 GTDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLIAHLAD 314 G D YPGG FDPLG PE EL+ KEIKNGRLAM ++ G + Q I TG GPI+NL H+AD Sbjct: 156 GLDKIYPGGA-FDPLGLAD-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHIAD 220
BLAST of CK739596 vs. ExPASy Swiss-Prot
Match: CB23_HORVU (Chlorophyll a-b binding protein of LHCII type III, chloroplastic OS=Hordeum vulgare GN=LHBC PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 5.114e-12 Identity = 39/77 (50.65%), Postives = 46/77 (59.74%), Query Frame = 3 Query: 93 FPNNKLTGTDVG---YPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLIAHLAD 314 F N L G G YPGG +FDPLG P EL+ KEIKNGRLAM ++ G + Q I TG GP++NL HL D Sbjct: 176 FRINGLDGVGEGNDLYPGGQYFDPLGLAD-DPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLFDHLDD 251
BLAST of CK739596 vs. ExPASy Swiss-Prot
Match: CB22_SOYBN (Chlorophyll a-b binding protein 2, chloroplastic OS=Glycine max GN=CAB2 PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 5.114e-12 Identity = 37/66 (56.06%), Postives = 45/66 (68.18%), Query Frame = 3 Query: 117 TDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLIAHLAD 314 TD YPGG FDPLG PE + EL+ KE+KNGRLAM ++ G + Q I TG GP++NL HLAD Sbjct: 176 TDPIYPGGS-FDPLGLAD-DPEALAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLAD 239
BLAST of CK739596 vs. ExPASy Swiss-Prot
Match: CB121_HORVU (Chlorophyll a-b binding protein 1B-21, chloroplastic OS=Hordeum vulgare GN=LHC Ib-21 PE=1 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 5.114e-12 Identity = 39/63 (61.90%), Postives = 45/63 (71.43%), Query Frame = 3 Query: 129 YPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQH-IYTGTGPIDNLIAHLAD 314 YPGG FDPLG+ S P K +EL+ KEIKNGRLAMLA +G Q Y GTGP++NL HLAD Sbjct: 167 YPGGA-FDPLGF-SKDPAKFEELKLKEIKNGRLAMLAFVGFCVQQSAYPGTGPLENLATHLAD 227 The following BLAST results are available for this feature:
BLAST of CK739596 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 64
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Sequences
The
following sequences are available for this feature:
EST sequence >CK739596 ID=CK739596; Name=CK739596; organism=Citrus sinensis; type=EST; length=319bpback to top |