CK739596
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK739596 vs. ExPASy Swiss-Prot
Match: CB2F_SOLLC (Chlorophyll a-b binding protein 3B, chloroplastic (Fragments) OS=Solanum lycopersicum GN=CAB3B PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 3.315e-11 Identity = 35/62 (56.45%), Postives = 42/62 (67.74%), Query Frame = 3 Query: 129 YPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLIAHLAD 314 YPGG FDPLG PE EL+ KEIKNGRLAM ++ G + Q I TG GP++NL H+AD Sbjct: 191 YPGGS-FDPLGLAE-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHIAD 250
BLAST of CK739596 vs. ExPASy Swiss-Prot
Match: CB2E_SOLLC (Chlorophyll a-b binding protein 3A, chloroplastic (Fragments) OS=Solanum lycopersicum GN=CAB3A PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 3.315e-11 Identity = 35/62 (56.45%), Postives = 42/62 (67.74%), Query Frame = 3 Query: 129 YPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLIAHLAD 314 YPGG FDPLG PE EL+ KEIKNGRLAM ++ G + Q I TG GP++NL H+AD Sbjct: 191 YPGGS-FDPLGLAE-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHIAD 250
BLAST of CK739596 vs. ExPASy Swiss-Prot
Match: CB25_NICPL (Chlorophyll a-b binding protein E, chloroplastic OS=Nicotiana plumbaginifolia GN=CABE PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 3.315e-11 Identity = 35/62 (56.45%), Postives = 42/62 (67.74%), Query Frame = 3 Query: 129 YPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLIAHLAD 314 YPGG FDPLG PE EL+ KEIKNGRLAM ++ G + Q + TG GP++NL HLAD Sbjct: 190 YPGGS-FDPLGLAE-DPEAFAELKVKEIKNGRLAMFSMFGFFVQALVTGKGPLENLADHLAD 249
BLAST of CK739596 vs. ExPASy Swiss-Prot
Match: CB22_PEA (Chlorophyll a-b binding protein AB80, chloroplastic OS=Pisum sativum GN=AB80 PE=1 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 3.315e-11 Identity = 35/62 (56.45%), Postives = 42/62 (67.74%), Query Frame = 3 Query: 129 YPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLIAHLAD 314 YPGG FDPLG PE EL+ KE+KNGRLAM ++ G + Q I TG GP++NL HLAD Sbjct: 193 YPGGS-FDPLGLAD-DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLAD 252
BLAST of CK739596 vs. ExPASy Swiss-Prot
Match: CB21_PETSP (Chlorophyll a-b binding protein 13, chloroplastic OS=Petunia sp. GN=CAB13 PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 3.315e-11 Identity = 36/62 (58.06%), Postives = 41/62 (66.13%), Query Frame = 3 Query: 129 YPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLIAHLAD 314 YPGG FDPLG PE EL KEIKNGRLAM ++ G + Q I TG GP++NL HLAD Sbjct: 190 YPGGS-FDPLGLAD-DPEAFAELEVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLAD 249
BLAST of CK739596 vs. ExPASy Swiss-Prot
Match: CB48_MAIZE (Chlorophyll a-b binding protein 48, chloroplastic OS=Zea mays GN=CAB48 PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 4.329e-11 Identity = 36/62 (58.06%), Postives = 42/62 (67.74%), Query Frame = 3 Query: 129 YPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLIAHLAD 314 Y GG FDPLG G PE+ EL+ KEIKNGRLAM ++ G + Q I TG GPI+NL HL D Sbjct: 188 YLGGS-FDPLGLGD-DPERFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLTD 247
BLAST of CK739596 vs. ExPASy Swiss-Prot
Match: CB2_DUNSA (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Dunaliella salina PE=2 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 4.329e-11 Identity = 45/102 (44.12%), Postives = 55/102 (53.92%), Query Frame = 3 Query: 9 VEMIFIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLIAHLAD 314 V+++ +G EG R VN P G D YPG FDPLG P+ EL+ KEIKNGRLAM A +G + Q I TG GPI+NL HLA+ Sbjct: 172 VQVVLMGLVEGYR---------VNGGPAGE-----GLDPLYPGEA-FDPLGLAD-DPDTFAELKVKEIKNGRLAMFACLGFFVQAIVTGKGPIENLTDHLAN 257
BLAST of CK739596 vs. ExPASy Swiss-Prot
Match: CB2A_PYRPY (Chlorophyll a-b binding protein 1A, chloroplastic OS=Pyrus pyrifolia PE=2 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 4.329e-11 Identity = 36/66 (54.55%), Postives = 44/66 (66.67%), Query Frame = 3 Query: 117 TDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLIAHLAD 314 TD YPGG FDPLG P+ +++ KEIKNGRLAM ++ G + Q I TG GPI+NL HLAD Sbjct: 198 TDPIYPGGN-FDPLGLAD-DPDAFADVKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLAD 261
BLAST of CK739596 vs. ExPASy Swiss-Prot
Match: CB23_SOYBN (Chlorophyll a-b binding protein 3, chloroplastic OS=Glycine max GN=CAB3 PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 4.329e-11 Identity = 36/65 (55.38%), Postives = 43/65 (66.15%), Query Frame = 3 Query: 117 TDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLIAHLA 311 TD YPGG FDPLG PE EL+ KE+KNGRLAM ++ G + Q I TG GP++NL HLA Sbjct: 183 TDPIYPGGS-FDPLGLAD-DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLA 245
BLAST of CK739596 vs. ExPASy Swiss-Prot
Match: CB21_MAIZE (Chlorophyll a-b binding protein 1, chloroplastic OS=Zea mays GN=CAB1 PE=3 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 5.654e-11 Identity = 34/62 (54.84%), Postives = 42/62 (67.74%), Query Frame = 3 Query: 129 YPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLIAHLAD 314 YPGG FDPLG PE EL+ KE+KNGRLAM ++ G + Q I TG GP++NL H+AD Sbjct: 186 YPGGS-FDPLGLAD-DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHIAD 245 The following BLAST results are available for this feature:
BLAST of CK739596 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 64
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Sequences
The
following sequences are available for this feature:
EST sequence >CK739596 ID=CK739596; Name=CK739596; organism=Citrus sinensis; type=EST; length=319bpback to top |