CK739602

Overview
NameCK739602
Unique NameCK739602
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length262
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK739602 vs. ExPASy Swiss-Prot
Match: PGK_NOSP7 (Phosphoglycerate kinase OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=pgk PE=3 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 7.065e-25
Identity = 55/72 (76.39%), Postives = 58/72 (80.56%), Query Frame = 2
Query:   47 GVNLLLPSDVVIADKFAADPNSKVVPATAIPDGWMGLDIGPYSVKTFNEALDTTKTVIWNGPMGVFEFDKFA 262
            GV LLLP+DVV+AD FA D NS+ V    IPDGWMGLDIGP SVK F EAL  TKTVIWNGPMGVFEFDKFA
Sbjct:  261 GVALLLPTDVVLADNFAPDANSQTVSIENIPDGWMGLDIGPDSVKFFQEALADTKTVIWNGPMGVFEFDKFA 332          
BLAST of CK739602 vs. ExPASy Swiss-Prot
Match: PGK_THEEB (Phosphoglycerate kinase OS=Thermosynechococcus elongatus (strain BP-1) GN=pgk PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 9.228e-25
Identity = 54/72 (75.00%), Postives = 58/72 (80.56%), Query Frame = 2
Query:   47 GVNLLLPSDVVIADKFAADPNSKVVPATAIPDGWMGLDIGPYSVKTFNEALDTTKTVIWNGPMGVFEFDKFA 262
            GV LLLP+DVV+AD FA D NS+VV   AIPD WMGLDIGP SVK F EAL   KTVIWNGPMGVFEFD+FA
Sbjct:  261 GVELLLPTDVVVADNFANDANSQVVSIEAIPDDWMGLDIGPASVKRFQEALQDCKTVIWNGPMGVFEFDQFA 332          
BLAST of CK739602 vs. ExPASy Swiss-Prot
Match: PGK_ANASP (Phosphoglycerate kinase OS=Anabaena sp. (strain PCC 7120) GN=pgk PE=1 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 9.228e-25
Identity = 54/72 (75.00%), Postives = 58/72 (80.56%), Query Frame = 2
Query:   47 GVNLLLPSDVVIADKFAADPNSKVVPATAIPDGWMGLDIGPYSVKTFNEALDTTKTVIWNGPMGVFEFDKFA 262
            GV+LLLP+DVV+AD FA D NS+ V    IPDGWMGLDIGP SVK F  AL  TKTVIWNGPMGVFEFDKFA
Sbjct:  261 GVSLLLPTDVVLADNFAPDANSQTVSIENIPDGWMGLDIGPDSVKVFQAALADTKTVIWNGPMGVFEFDKFA 332          
BLAST of CK739602 vs. ExPASy Swiss-Prot
Match: PGK_ACAM1 (Phosphoglycerate kinase OS=Acaryochloris marina (strain MBIC 11017) GN=pgk PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 9.228e-25
Identity = 54/72 (75.00%), Postives = 57/72 (79.17%), Query Frame = 2
Query:   47 GVNLLLPSDVVIADKFAADPNSKVVPATAIPDGWMGLDIGPYSVKTFNEALDTTKTVIWNGPMGVFEFDKFA 262
            GV LLLPSDVV+AD FAAD N++ V    IPDGWMGLDIGP SVK F  AL   KTVIWNGPMGVFEFDKFA
Sbjct:  262 GVALLLPSDVVVADNFAADANAQTVSINNIPDGWMGLDIGPNSVKEFQAALSDCKTVIWNGPMGVFEFDKFA 333          
BLAST of CK739602 vs. ExPASy Swiss-Prot
Match: PGKH_VOLCA (Phosphoglycerate kinase, chloroplastic OS=Volvox carteri GN=PGK PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 9.228e-25
Identity = 52/72 (72.22%), Postives = 59/72 (81.94%), Query Frame = 2
Query:   47 GVNLLLPSDVVIADKFAADPNSKVVPATAIPDGWMGLDIGPYSVKTFNEALDTTKTVIWNGPMGVFEFDKFA 262
            GV LLLPSDVV+ADKF A+ N++ V   AIPDGWMGLDIGP S+KTF +AL   KTV+WNGPMGVFEF KFA
Sbjct:  323 GVQLLLPSDVVVADKFDANANTQTVSVEAIPDGWMGLDIGPDSIKTFQDALADAKTVVWNGPMGVFEFPKFA 394          
BLAST of CK739602 vs. ExPASy Swiss-Prot
Match: PGK_SYNS3 (Phosphoglycerate kinase OS=Synechococcus sp. (strain CC9311) GN=pgk PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 1.205e-24
Identity = 52/72 (72.22%), Postives = 58/72 (80.56%), Query Frame = 2
Query:   47 GVNLLLPSDVVIADKFAADPNSKVVPATAIPDGWMGLDIGPYSVKTFNEALDTTKTVIWNGPMGVFEFDKFA 262
            GV LLLP+DV++AD FA D NS+V   TAIPDGWMGLDIGP ++K F  AL   KTVIWNGPMGVFEFDKFA
Sbjct:  262 GVELLLPTDVLLADNFAPDANSQVADVTAIPDGWMGLDIGPDAIKVFQAALADCKTVIWNGPMGVFEFDKFA 333          
BLAST of CK739602 vs. ExPASy Swiss-Prot
Match: PGK_SYNPX (Phosphoglycerate kinase OS=Synechococcus sp. (strain WH8102) GN=pgk PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 1.205e-24
Identity = 52/72 (72.22%), Postives = 59/72 (81.94%), Query Frame = 2
Query:   47 GVNLLLPSDVVIADKFAADPNSKVVPATAIPDGWMGLDIGPYSVKTFNEALDTTKTVIWNGPMGVFEFDKFA 262
            GV LLLP+DVV+AD FA D NS+V   TAIPDGWMGLDIGP +VK F +AL   +TVIWNGPMGVFEF+KFA
Sbjct:  262 GVELLLPTDVVLADNFAPDANSQVADVTAIPDGWMGLDIGPDAVKVFQDALGDCQTVIWNGPMGVFEFEKFA 333          
BLAST of CK739602 vs. ExPASy Swiss-Prot
Match: PGK_SYNR3 (Phosphoglycerate kinase OS=Synechococcus sp. (strain RCC307) GN=pgk PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 1.574e-24
Identity = 52/72 (72.22%), Postives = 58/72 (80.56%), Query Frame = 2
Query:   47 GVNLLLPSDVVIADKFAADPNSKVVPATAIPDGWMGLDIGPYSVKTFNEALDTTKTVIWNGPMGVFEFDKFA 262
            GV LLLP+DVV+AD FA D NS+V    AIP+GWMGLDIGP S+K F +AL   KTVIWNGPMGVFEFDKFA
Sbjct:  262 GVQLLLPTDVVLADNFAPDANSQVASIDAIPEGWMGLDIGPDSIKVFQDALGDCKTVIWNGPMGVFEFDKFA 333          
BLAST of CK739602 vs. ExPASy Swiss-Prot
Match: PGK_SYNE7 (Phosphoglycerate kinase OS=Synechococcus elongatus (strain PCC 7942) GN=pgk PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 1.574e-24
Identity = 53/72 (73.61%), Postives = 58/72 (80.56%), Query Frame = 2
Query:   47 GVNLLLPSDVVIADKFAADPNSKVVPATAIPDGWMGLDIGPYSVKTFNEALDTTKTVIWNGPMGVFEFDKFA 262
            GV LLLP DVV+ADKFA D N+K V   AIPDGWMGLDIGP SVK F EAL   ++VIWNGPMGVFEFD+FA
Sbjct:  262 GVQLLLPVDVVVADKFAPDANAKTVAIDAIPDGWMGLDIGPESVKQFEEALADCRSVIWNGPMGVFEFDQFA 333          
BLAST of CK739602 vs. ExPASy Swiss-Prot
Match: PGK_SYNSC (Phosphoglycerate kinase OS=Synechococcus sp. (strain CC9605) GN=pgk PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 2.056e-24
Identity = 52/72 (72.22%), Postives = 57/72 (79.17%), Query Frame = 2
Query:   47 GVNLLLPSDVVIADKFAADPNSKVVPATAIPDGWMGLDIGPYSVKTFNEALDTTKTVIWNGPMGVFEFDKFA 262
            GV LLLP+DVV+AD FA D NS+     AIPDGWMGLDIGP S+K F EAL   +TVIWNGPMGVFEFDKFA
Sbjct:  262 GVQLLLPTDVVLADNFAPDANSQTADINAIPDGWMGLDIGPDSIKVFQEALADCQTVIWNGPMGVFEFDKFA 333          
The following BLAST results are available for this feature:
BLAST of CK739602 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 400
Match NameE-valueIdentityDescription
PGK_NOSP77.065e-2576.39Phosphoglycerate kinase OS=Nostoc punctiforme (str... [more]
PGK_THEEB9.228e-2575.00Phosphoglycerate kinase OS=Thermosynechococcus elo... [more]
PGK_ANASP9.228e-2575.00Phosphoglycerate kinase OS=Anabaena sp. (strain PC... [more]
PGK_ACAM19.228e-2575.00Phosphoglycerate kinase OS=Acaryochloris marina (s... [more]
PGKH_VOLCA9.228e-2572.22Phosphoglycerate kinase, chloroplastic OS=Volvox c... [more]
PGK_SYNS31.205e-2472.22Phosphoglycerate kinase OS=Synechococcus sp. (stra... [more]
PGK_SYNPX1.205e-2472.22Phosphoglycerate kinase OS=Synechococcus sp. (stra... [more]
PGK_SYNR31.574e-2472.22Phosphoglycerate kinase OS=Synechococcus sp. (stra... [more]
PGK_SYNE71.574e-2473.61Phosphoglycerate kinase OS=Synechococcus elongatus... [more]
PGK_SYNSC2.056e-2472.22Phosphoglycerate kinase OS=Synechococcus sp. (stra... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_5989 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE57E02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK739602 ID=CK739602; Name=CK739602; organism=Citrus sinensis; type=EST; length=262bp
TAAGCTTGACCTTGCTACAACACTTCTTGCAAAGGCCAAGGCTAAAGGTG
TTAATCTTTTGTTACCCTCTGATGTGGTAATTGCTGACAAATTTGCTGCT
GACCCAAACAGCAAGGTTGTGCCAGCAACTGCCATTCCTGATGGCTGGAT
GGGATTGGATATTGGACCATATTCTGTTAAGACATTCAACGAAGCTTTAG
ATACTACCAAAACTGTCATCTGGAATGGCCCAATGGGAGTGTTTGAGTTT
GACAAGTTCGCT
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