CK739602

Overview
NameCK739602
Unique NameCK739602
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length262
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK739602 vs. ExPASy Swiss-Prot
Match: YCQ3_YEAST (Putative uncharacterized protein YCR013C OS=Saccharomyces cerevisiae GN=YCR013C PE=5 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 1.528e-11
Identity = 37/79 (46.84%), Postives = 49/79 (62.03%), Query Frame = -2
Query:   28 ANLSNSNTPIGPFQMTVLVVSKASLNVLTEYGPISNPIQPSGM-AVAGTTLLFGSAANLSAITTSEGNKRLTPLALAFA 261
            AN SNS TP GPFQ  VL  +  + N   + GP+SNP QP+G+ +++ T L+  SA   SA+  S G    TPLALAF+
Sbjct:   89 ANFSNSKTPGGPFQTMVLAFATVAANNFLDSGPLSNPCQPAGIPSLSVTVLVLASAEKASAMMKSTGKTTSTPLALAFS 167          
BLAST of CK739602 vs. ExPASy Swiss-Prot
Match: PGK_PSEA7 (Phosphoglycerate kinase OS=Pseudomonas aeruginosa (strain PA7) GN=pgk PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 1.528e-11
Identity = 33/70 (47.14%), Postives = 45/70 (64.29%), Query Frame = 2
Query:   50 VNLLLPSDVVIADKFAADPNSKVVPATAIPDGWMGLDIGPYSVKTFNEALDTTKTVIWNGPMGVFEFDKF 259
            V + LP DVV+A +FA    + V     + D  M LDIGP +   F + L T+KT++WNGP+GVFEFD+F
Sbjct:  249 VKVPLPVDVVVAKEFAESAVATVKAIAEVADDDMILDIGPQTAAQFADLLKTSKTILWNGPVGVFEFDQF 318          
BLAST of CK739602 vs. ExPASy Swiss-Prot
Match: PGK_NEIMB (Phosphoglycerate kinase OS=Neisseria meningitidis serogroup B GN=pgk PE=3 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 1.528e-11
Identity = 34/72 (47.22%), Postives = 45/72 (62.50%), Query Frame = 2
Query:   47 GVNLLLPSDVVIADKFAADPNSKVVPATAIPDGWMGLDIGPYSVKTFNEALDTTKTVIWNGPMGVFEFDKFA 262
            G ++ LP+DVV+A  FAAD  + V     + +  M LDIGP S     + L    TV+WNGP+GVFEFD+FA
Sbjct:  254 GGSVPLPTDVVVAKAFAADAEAVVKDIADVAEDEMILDIGPKSAAALADLLKAAGTVVWNGPVGVFEFDQFA 325          
BLAST of CK739602 vs. ExPASy Swiss-Prot
Match: PGK_NEIMA (Phosphoglycerate kinase OS=Neisseria meningitidis serogroup A GN=pgk PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 1.528e-11
Identity = 34/72 (47.22%), Postives = 45/72 (62.50%), Query Frame = 2
Query:   47 GVNLLLPSDVVIADKFAADPNSKVVPATAIPDGWMGLDIGPYSVKTFNEALDTTKTVIWNGPMGVFEFDKFA 262
            G ++ LP+DVV+A  FAAD  + V     + +  M LDIGP S     + L    TV+WNGP+GVFEFD+FA
Sbjct:  254 GGSVPLPTDVVVAKAFAADAEAVVKDIADVAEDDMILDIGPKSAAALADLLKAADTVVWNGPVGVFEFDQFA 325          
BLAST of CK739602 vs. ExPASy Swiss-Prot
Match: PGK_NEIG1 (Phosphoglycerate kinase OS=Neisseria gonorrhoeae (strain ATCC 700825 / FA 1090) GN=pgk PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 1.528e-11
Identity = 34/72 (47.22%), Postives = 45/72 (62.50%), Query Frame = 2
Query:   47 GVNLLLPSDVVIADKFAADPNSKVVPATAIPDGWMGLDIGPYSVKTFNEALDTTKTVIWNGPMGVFEFDKFA 262
            G ++ LP+DVV+A  FAAD  + V     + +  M LDIGP S     + L    TV+WNGP+GVFEFD+FA
Sbjct:  254 GGSVPLPTDVVVAKAFAADAEAVVKDIADVAEDEMILDIGPKSAAALADLLKAAGTVVWNGPVGVFEFDQFA 325          
BLAST of CK739602 vs. ExPASy Swiss-Prot
Match: PGK_LACGA (Phosphoglycerate kinase OS=Lactobacillus gasseri (strain ATCC 33323 / DSM 20243) GN=pgk PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 1.528e-11
Identity = 35/72 (48.61%), Postives = 45/72 (62.50%), Query Frame = 2
Query:   47 GVNLLLPSDVVIADKFAADPNSKVVPATAIPDGWMGLDIGPYSVKTFNEALDTTKTVIWNGPMGVFEFDKFA 262
            G  ++LP D V A +F+ D   +VV    IPD  MGLDIGP +V+ F + L   KTV+WNGPMG FE   +A
Sbjct:  267 GDKIVLPVDNVAATEFSNDAPHEVV-GDDIPDNEMGLDIGPKTVEKFRDILKDAKTVVWNGPMGAFEMPNYA 337          
BLAST of CK739602 vs. ExPASy Swiss-Prot
Match: PGK_HYDS0 (Phosphoglycerate kinase OS=Hydrogenobaculum sp. (strain Y04AAS1) GN=pgk PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 1.528e-11
Identity = 29/71 (40.85%), Postives = 43/71 (60.56%), Query Frame = 2
Query:   47 GVNLLLPSDVVIADKFAADPNSKVVPATAIPDGWMGLDIGPYSVKTFNEALDTTKTVIWNGPMGVFEFDKF 259
            GV   LP D ++  + + +   K V    IP  +MGLDIGP S+    E + T +T++WNGPMG FE+++F
Sbjct:  259 GVKFYLPVDFIVGKELSDNTPIKTVLWQEIPQDYMGLDIGPVSISLAKELIGTAQTIVWNGPMGAFEYERF 329          
BLAST of CK739602 vs. ExPASy Swiss-Prot
Match: PGK_EXIS2 (Phosphoglycerate kinase OS=Exiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15) GN=pgk PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 1.528e-11
Identity = 33/72 (45.83%), Postives = 44/72 (61.11%), Query Frame = 2
Query:   47 GVNLLLPSDVVIADKFAADPNSKVVPATAIPDGWMGLDIGPYSVKTFNEALDTTKTVIWNGPMGVFEFDKFA 262
            GV  L+P D VI  +F  +         +IP   M LDIGP +V+ + EA+  +K V+WNGPMGVFE DK+A
Sbjct:  258 GVKFLMPVDCVITKEFGEETYVGSRDIDSIPADHMSLDIGPKTVELYAEAIKASKLVVWNGPMGVFELDKYA 329          
BLAST of CK739602 vs. ExPASy Swiss-Prot
Match: PGK2_HUMAN (Phosphoglycerate kinase 2 OS=Homo sapiens GN=PGK2 PE=1 SV=3)

HSP 1 Score: 68.1662 bits (165), Expect = 1.528e-11
Identity = 35/75 (46.67%), Postives = 45/75 (60.00%), Query Frame = 2
Query:   47 GVNLLLPSDVVIADKFAADPNSKVVPATA---IPDGWMGLDIGPYSVKTFNEALDTTKTVIWNGPMGVFEFDKFA 262
            GV +  P D V  DKF  D N++V  AT    I  GWMGLD GP S K   + +   + ++WNGP+GVFE+D FA
Sbjct:  277 GVRITFPVDFVTGDKF--DENAQVGKATVASGISPGWMGLDCGPESNKNHAQVVAQARLIVWNGPLGVFEWDAFA 349          
BLAST of CK739602 vs. ExPASy Swiss-Prot
Match: PGK_THETN (Phosphoglycerate kinase OS=Thermoanaerobacter tengcongensis GN=pgk PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 1.996e-11
Identity = 30/72 (41.67%), Postives = 47/72 (65.28%), Query Frame = 2
Query:   47 GVNLLLPSDVVIADKFAADPNSKVVPATAIPDGWMGLDIGPYSVKTFNEALDTTKTVIWNGPMGVFEFDKFA 262
            GVN +LP D VIA +  +    +VV    +P+  +G+DIGP +++ +++ +    TV+WNGPMGVFE  +FA
Sbjct:  258 GVNFMLPVDTVIAKELKSGVPYEVVDIDKMPEDQIGVDIGPKTIEEYSKVIKHAMTVVWNGPMGVFEIPEFA 329          
The following BLAST results are available for this feature:
BLAST of CK739602 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 400
Match NameE-valueIdentityDescription
YCQ3_YEAST1.528e-1146.84Putative uncharacterized protein YCR013C OS=Saccha... [more]
PGK_PSEA71.528e-1147.14Phosphoglycerate kinase OS=Pseudomonas aeruginosa ... [more]
PGK_NEIMB1.528e-1147.22Phosphoglycerate kinase OS=Neisseria meningitidis ... [more]
PGK_NEIMA1.528e-1147.22Phosphoglycerate kinase OS=Neisseria meningitidis ... [more]
PGK_NEIG11.528e-1147.22Phosphoglycerate kinase OS=Neisseria gonorrhoeae (... [more]
PGK_LACGA1.528e-1148.61Phosphoglycerate kinase OS=Lactobacillus gasseri (... [more]
PGK_HYDS01.528e-1140.85Phosphoglycerate kinase OS=Hydrogenobaculum sp. (s... [more]
PGK_EXIS21.528e-1145.83Phosphoglycerate kinase OS=Exiguobacterium sibiric... [more]
PGK2_HUMAN1.528e-1146.67Phosphoglycerate kinase 2 OS=Homo sapiens GN=PGK2 ... [more]
PGK_THETN1.996e-1141.67Phosphoglycerate kinase OS=Thermoanaerobacter teng... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_5989 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE57E02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK739602 ID=CK739602; Name=CK739602; organism=Citrus sinensis; type=EST; length=262bp
TAAGCTTGACCTTGCTACAACACTTCTTGCAAAGGCCAAGGCTAAAGGTG
TTAATCTTTTGTTACCCTCTGATGTGGTAATTGCTGACAAATTTGCTGCT
GACCCAAACAGCAAGGTTGTGCCAGCAACTGCCATTCCTGATGGCTGGAT
GGGATTGGATATTGGACCATATTCTGTTAAGACATTCAACGAAGCTTTAG
ATACTACCAAAACTGTCATCTGGAATGGCCCAATGGGAGTGTTTGAGTTT
GACAAGTTCGCT
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