CK739602

Overview
NameCK739602
Unique NameCK739602
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length262
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK739602 vs. ExPASy Swiss-Prot
Match: PGK_STRTD (Phosphoglycerate kinase OS=Streptococcus thermophilus (strain ATCC BAA-491 / LMD-9) GN=pgk PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 1.996e-11
Identity = 35/68 (51.47%), Postives = 42/68 (61.76%), Query Frame = 2
Query:   56 LLLPSDVVIADKFAADPNSKVVPATAIPDGWMGLDIGPYSVKTFNEALDTTKTVIWNGPMGVFEFDKF 259
            L+LP D   A+ FA     K     AI  G++GLDIGP S+  F+EAL   KTV+WNGPMGVFE   F
Sbjct:  265 LILPVDSKEANAFADYTEVKYTEGEAIDPGFLGLDIGPKSIAKFDEALTGAKTVVWNGPMGVFENPDF 332          
BLAST of CK739602 vs. ExPASy Swiss-Prot
Match: PGK_MARMM (Phosphoglycerate kinase OS=Maricaulis maris (strain MCS10) GN=pgk PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 1.996e-11
Identity = 30/71 (42.25%), Postives = 45/71 (63.38%), Query Frame = 2
Query:   47 GVNLLLPSDVVIADKFAADPNSKVVPATAIPDGWMGLDIGPYSVKTFNEALDTTKTVIWNGPMGVFEFDKF 259
            G  L+LP+DVV+A +F  +P +++   T + D  M LD GP +V    +A+D + T+IWNGP+G FE   F
Sbjct:  258 GCKLMLPTDVVLAKEFKPNPETRLAAVTDVEDNEMILDCGPATVVALGQAIDRSATLIWNGPLGAFETPPF 328          
BLAST of CK739602 vs. ExPASy Swiss-Prot
Match: PGK_LACJO (Phosphoglycerate kinase OS=Lactobacillus johnsonii GN=pgk PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 1.996e-11
Identity = 34/72 (47.22%), Postives = 45/72 (62.50%), Query Frame = 2
Query:   47 GVNLLLPSDVVIADKFAADPNSKVVPATAIPDGWMGLDIGPYSVKTFNEALDTTKTVIWNGPMGVFEFDKFA 262
            G  ++LP D V A +F+ D   ++V    IPD  MGLDIGP +V+ F + L   KTV+WNGPMG FE   +A
Sbjct:  267 GDKIVLPVDNVAATEFSNDAPHEIV-GDDIPDNEMGLDIGPKTVEKFRDILKDAKTVVWNGPMGAFEMPNYA 337          
BLAST of CK739602 vs. ExPASy Swiss-Prot
Match: PGK_BORPE (Phosphoglycerate kinase OS=Bordetella pertussis GN=pgk PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 1.996e-11
Identity = 32/72 (44.44%), Postives = 45/72 (62.50%), Query Frame = 2
Query:   47 GVNLLLPSDVVIADKFAADPNSKVVPATAIPDGWMGLDIGPYSVKTFNEALDTTKTVIWNGPMGVFEFDKFA 262
            G  + +P+DVV A  F AD  + V  A  + +  M LDIGP + +   + L T  T++WNGP+GVFEFD+FA
Sbjct:  259 GAEVPIPTDVVCAKSFGADAAATVKAAADVAEDDMILDIGPQTAQRLADILKTAGTIVWNGPVGVFEFDQFA 330          
BLAST of CK739602 vs. ExPASy Swiss-Prot
Match: PGK_STRZT (Phosphoglycerate kinase OS=Streptococcus pneumoniae (strain Taiwan19F-14) GN=pgk PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 2.607e-11
Identity = 33/68 (48.53%), Postives = 43/68 (63.24%), Query Frame = 2
Query:   56 LLLPSDVVIADKFAADPNSKVVPATAIPDGWMGLDIGPYSVKTFNEALDTTKTVIWNGPMGVFEFDKF 259
            L+LP D   A+ FA     +     A+ +G++GLDIGP S+  F+EAL   KTV+WNGPMGVFE   F
Sbjct:  264 LILPVDSKEANAFAGYTEVRDTEGEAVSEGFLGLDIGPKSIAKFDEALTGAKTVVWNGPMGVFENPDF 331          
BLAST of CK739602 vs. ExPASy Swiss-Prot
Match: PGK_STRZP (Phosphoglycerate kinase OS=Streptococcus pneumoniae (strain P1031) GN=pgk PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 2.607e-11
Identity = 33/68 (48.53%), Postives = 43/68 (63.24%), Query Frame = 2
Query:   56 LLLPSDVVIADKFAADPNSKVVPATAIPDGWMGLDIGPYSVKTFNEALDTTKTVIWNGPMGVFEFDKF 259
            L+LP D   A+ FA     +     A+ +G++GLDIGP S+  F+EAL   KTV+WNGPMGVFE   F
Sbjct:  264 LILPVDSKEANAFAGYTEVRDTEGEAVSEGFLGLDIGPKSIAKFDEALTGAKTVVWNGPMGVFENPDF 331          
BLAST of CK739602 vs. ExPASy Swiss-Prot
Match: PGK_STRZJ (Phosphoglycerate kinase OS=Streptococcus pneumoniae (strain JJA) GN=pgk PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 2.607e-11
Identity = 33/68 (48.53%), Postives = 43/68 (63.24%), Query Frame = 2
Query:   56 LLLPSDVVIADKFAADPNSKVVPATAIPDGWMGLDIGPYSVKTFNEALDTTKTVIWNGPMGVFEFDKF 259
            L+LP D   A+ FA     +     A+ +G++GLDIGP S+  F+EAL   KTV+WNGPMGVFE   F
Sbjct:  264 LILPVDSKEANAFAGYTEVRDTEGEAVSEGFLGLDIGPKSIAKFDEALTGAKTVVWNGPMGVFENPDF 331          
BLAST of CK739602 vs. ExPASy Swiss-Prot
Match: PGK_STRU0 (Phosphoglycerate kinase OS=Streptococcus uberis (strain ATCC BAA-854 / 0140J) GN=pgk PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 2.607e-11
Identity = 33/68 (48.53%), Postives = 43/68 (63.24%), Query Frame = 2
Query:   56 LLLPSDVVIADKFAADPNSKVVPATAIPDGWMGLDIGPYSVKTFNEALDTTKTVIWNGPMGVFEFDKF 259
            L+LP D   A+ FA     +     A+ +G++GLDIGP S+  F EAL+  KTV+WNGPMGVFE   F
Sbjct:  264 LILPVDSKEANAFADYTEVRDTEGEAVSEGFLGLDIGPKSIAKFEEALEGAKTVVWNGPMGVFENPDF 331          
BLAST of CK739602 vs. ExPASy Swiss-Prot
Match: PGK_STRT2 (Phosphoglycerate kinase OS=Streptococcus thermophilus (strain ATCC BAA-250 / LMG 18311) GN=pgk PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 2.607e-11
Identity = 34/68 (50.00%), Postives = 42/68 (61.76%), Query Frame = 2
Query:   56 LLLPSDVVIADKFAADPNSKVVPATAIPDGWMGLDIGPYSVKTFNEALDTTKTVIWNGPMGVFEFDKF 259
            L+LP D   A+ FA     K     A+  G++GLDIGP S+  F+EAL   KTV+WNGPMGVFE   F
Sbjct:  265 LILPVDSKEANAFADYTEVKYTEGEAVDPGFLGLDIGPKSIAKFDEALTGAKTVVWNGPMGVFENPDF 332          
BLAST of CK739602 vs. ExPASy Swiss-Prot
Match: PGK_STRT1 (Phosphoglycerate kinase OS=Streptococcus thermophilus (strain CNRZ 1066) GN=pgk PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 2.607e-11
Identity = 34/68 (50.00%), Postives = 42/68 (61.76%), Query Frame = 2
Query:   56 LLLPSDVVIADKFAADPNSKVVPATAIPDGWMGLDIGPYSVKTFNEALDTTKTVIWNGPMGVFEFDKF 259
            L+LP D   A+ FA     K     A+  G++GLDIGP S+  F+EAL   KTV+WNGPMGVFE   F
Sbjct:  265 LILPVDSKEANAFADYTEVKYTEGEAVDPGFLGLDIGPKSIAKFDEALTGAKTVVWNGPMGVFENPDF 332          
The following BLAST results are available for this feature:
BLAST of CK739602 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 400
Match NameE-valueIdentityDescription
PGK_STRTD1.996e-1151.47Phosphoglycerate kinase OS=Streptococcus thermophi... [more]
PGK_MARMM1.996e-1142.25Phosphoglycerate kinase OS=Maricaulis maris (strai... [more]
PGK_LACJO1.996e-1147.22Phosphoglycerate kinase OS=Lactobacillus johnsonii... [more]
PGK_BORPE1.996e-1144.44Phosphoglycerate kinase OS=Bordetella pertussis GN... [more]
PGK_STRZT2.607e-1148.53Phosphoglycerate kinase OS=Streptococcus pneumonia... [more]
PGK_STRZP2.607e-1148.53Phosphoglycerate kinase OS=Streptococcus pneumonia... [more]
PGK_STRZJ2.607e-1148.53Phosphoglycerate kinase OS=Streptococcus pneumonia... [more]
PGK_STRU02.607e-1148.53Phosphoglycerate kinase OS=Streptococcus uberis (s... [more]
PGK_STRT22.607e-1150.00Phosphoglycerate kinase OS=Streptococcus thermophi... [more]
PGK_STRT12.607e-1150.00Phosphoglycerate kinase OS=Streptococcus thermophi... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_5989 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE57E02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK739602 ID=CK739602; Name=CK739602; organism=Citrus sinensis; type=EST; length=262bp
TAAGCTTGACCTTGCTACAACACTTCTTGCAAAGGCCAAGGCTAAAGGTG
TTAATCTTTTGTTACCCTCTGATGTGGTAATTGCTGACAAATTTGCTGCT
GACCCAAACAGCAAGGTTGTGCCAGCAACTGCCATTCCTGATGGCTGGAT
GGGATTGGATATTGGACCATATTCTGTTAAGACATTCAACGAAGCTTTAG
ATACTACCAAAACTGTCATCTGGAATGGCCCAATGGGAGTGTTTGAGTTT
GACAAGTTCGCT
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