CK739602

Overview
NameCK739602
Unique NameCK739602
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length262
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CK739602 vs. ExPASy Swiss-Prot
Match: PGK_STRSY (Phosphoglycerate kinase OS=Streptococcus suis (strain 05ZYH33) GN=pgk PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 2.607e-11
Identity = 33/68 (48.53%), Postives = 43/68 (63.24%), Query Frame = 2 
Query:   56 LLLPSDVVIADKFAADPNSKVVPATAIPDGWMGLDIGPYSVKTFNEALDTTKTVIWNGPMGVFEFDKF 259
            L+LP D   A+ FA     +     A+ +G++GLDIGP S+  F+EAL   KTV+WNGPMGVFE   F
Sbjct:  265 LILPVDSKEANAFAGYTEVRDTDGEAVSEGFLGLDIGPKSIAKFDEALTGAKTVVWNGPMGVFENPDF 332
[Close]
BLAST of CK739602 vs. ExPASy Swiss-Prot
Match: PGK_STRS2 (Phosphoglycerate kinase OS=Streptococcus suis (strain 98HAH33) GN=pgk PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 2.607e-11
Identity = 33/68 (48.53%), Postives = 43/68 (63.24%), Query Frame = 2 
Query:   56 LLLPSDVVIADKFAADPNSKVVPATAIPDGWMGLDIGPYSVKTFNEALDTTKTVIWNGPMGVFEFDKF 259
            L+LP D   A+ FA     +     A+ +G++GLDIGP S+  F+EAL   KTV+WNGPMGVFE   F
Sbjct:  265 LILPVDSKEANAFAGYTEVRDTDGEAVSEGFLGLDIGPKSIAKFDEALTGAKTVVWNGPMGVFENPDF 332
[Close]
BLAST of CK739602 vs. ExPASy Swiss-Prot
Match: PGK_STRR6 (Phosphoglycerate kinase OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=pgk PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 2.607e-11
Identity = 33/68 (48.53%), Postives = 43/68 (63.24%), Query Frame = 2 
Query:   56 LLLPSDVVIADKFAADPNSKVVPATAIPDGWMGLDIGPYSVKTFNEALDTTKTVIWNGPMGVFEFDKF 259
            L+LP D   A+ FA     +     A+ +G++GLDIGP S+  F+EAL   KTV+WNGPMGVFE   F
Sbjct:  264 LILPVDSKEANAFAGYTEVRDTEGEAVSEGFLGLDIGPKSIAKFDEALTGAKTVVWNGPMGVFENPDF 331
[Close]
BLAST of CK739602 vs. ExPASy Swiss-Prot
Match: PGK_STRPS (Phosphoglycerate kinase OS=Streptococcus pneumoniae (strain CGSP14) GN=pgk PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 2.607e-11
Identity = 33/68 (48.53%), Postives = 43/68 (63.24%), Query Frame = 2 
Query:   56 LLLPSDVVIADKFAADPNSKVVPATAIPDGWMGLDIGPYSVKTFNEALDTTKTVIWNGPMGVFEFDKF 259
            L+LP D   A+ FA     +     A+ +G++GLDIGP S+  F+EAL   KTV+WNGPMGVFE   F
Sbjct:  264 LILPVDSKEANAFAGYTEVRDTEGEAVSEGFLGLDIGPKSIAKFDEALTGAKTVVWNGPMGVFENPDF 331
[Close]
BLAST of CK739602 vs. ExPASy Swiss-Prot
Match: PGK_STRPN (Phosphoglycerate kinase OS=Streptococcus pneumoniae GN=pgk PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 2.607e-11
Identity = 33/68 (48.53%), Postives = 43/68 (63.24%), Query Frame = 2 
Query:   56 LLLPSDVVIADKFAADPNSKVVPATAIPDGWMGLDIGPYSVKTFNEALDTTKTVIWNGPMGVFEFDKF 259
            L+LP D   A+ FA     +     A+ +G++GLDIGP S+  F+EAL   KTV+WNGPMGVFE   F
Sbjct:  264 LILPVDSKEANAFAGYTEVRDTEGEAVSEGFLGLDIGPKSIAKFDEALTGAKTVVWNGPMGVFENPDF 331
[Close]
BLAST of CK739602 vs. ExPASy Swiss-Prot
Match: PGK_STRPM (Phosphoglycerate kinase OS=Streptococcus pyogenes serotype M28 GN=pgk PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 2.607e-11
Identity = 33/68 (48.53%), Postives = 43/68 (63.24%), Query Frame = 2 
Query:   56 LLLPSDVVIADKFAADPNSKVVPATAIPDGWMGLDIGPYSVKTFNEALDTTKTVIWNGPMGVFEFDKF 259
            L+LP D   A+ FA     +     A+ +G++GLDIGP S+  F+EAL   KTV+WNGPMGVFE   F
Sbjct:  264 LILPVDSKEANAFAGYTEVRDTEGEAVSEGFLGLDIGPKSIAKFDEALTGAKTVVWNGPMGVFENPDF 331
[Close]
BLAST of CK739602 vs. ExPASy Swiss-Prot
Match: PGK_STRPJ (Phosphoglycerate kinase OS=Streptococcus pneumoniae (strain ATCC 700669 / Spain 23F-1) GN=pgk PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 2.607e-11
Identity = 33/68 (48.53%), Postives = 43/68 (63.24%), Query Frame = 2 
Query:   56 LLLPSDVVIADKFAADPNSKVVPATAIPDGWMGLDIGPYSVKTFNEALDTTKTVIWNGPMGVFEFDKF 259
            L+LP D   A+ FA     +     A+ +G++GLDIGP S+  F+EAL   KTV+WNGPMGVFE   F
Sbjct:  264 LILPVDSKEANAFAGYTEVRDTEGEAVSEGFLGLDIGPKSIAKFDEALTGAKTVVWNGPMGVFENPDF 331
[Close]
BLAST of CK739602 vs. ExPASy Swiss-Prot
Match: PGK_STRPI (Phosphoglycerate kinase OS=Streptococcus pneumoniae (strain Hungary19A-6) GN=pgk PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 2.607e-11
Identity = 33/68 (48.53%), Postives = 43/68 (63.24%), Query Frame = 2 
Query:   56 LLLPSDVVIADKFAADPNSKVVPATAIPDGWMGLDIGPYSVKTFNEALDTTKTVIWNGPMGVFEFDKF 259
            L+LP D   A+ FA     +     A+ +G++GLDIGP S+  F+EAL   KTV+WNGPMGVFE   F
Sbjct:  264 LILPVDSKEANAFAGYTEVRDTEGEAVSEGFLGLDIGPKSIAKFDEALTGAKTVVWNGPMGVFENPDF 331
[Close]
BLAST of CK739602 vs. ExPASy Swiss-Prot
Match: PGK_STRPF (Phosphoglycerate kinase OS=Streptococcus pyogenes serotype M4 (strain MGAS10750) GN=pgk PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 2.607e-11
Identity = 33/68 (48.53%), Postives = 43/68 (63.24%), Query Frame = 2 
Query:   56 LLLPSDVVIADKFAADPNSKVVPATAIPDGWMGLDIGPYSVKTFNEALDTTKTVIWNGPMGVFEFDKF 259
            L+LP D   A+ FA     +     A+ +G++GLDIGP S+  F+EAL   KTV+WNGPMGVFE   F
Sbjct:  264 LILPVDSKEANAFAGYTEVRDTEGEAVSEGFLGLDIGPKSIAKFDEALTGAKTVVWNGPMGVFENPDF 331
[Close]
BLAST of CK739602 vs. ExPASy Swiss-Prot
Match: PGK_STRP7 (Phosphoglycerate kinase OS=Streptococcus pneumoniae (strain 70585) GN=pgk PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 2.607e-11
Identity = 33/68 (48.53%), Postives = 43/68 (63.24%), Query Frame = 2 
Query:   56 LLLPSDVVIADKFAADPNSKVVPATAIPDGWMGLDIGPYSVKTFNEALDTTKTVIWNGPMGVFEFDKF 259
            L+LP D   A+ FA     +     A+ +G++GLDIGP S+  F+EAL   KTV+WNGPMGVFE   F
Sbjct:  264 LILPVDSKEANAFAGYTEVRDTEGEAVSEGFLGLDIGPKSIAKFDEALTGAKTVVWNGPMGVFENPDF 331
The following BLAST results are available for this feature:
BLAST of CK739602 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 400
Match NameE-valueIdentityDescription
PGK_STRSY2.607e-1148.53Phosphoglycerate kinase OS=Streptococcus suis (str... [more]
PGK_STRS22.607e-1148.53Phosphoglycerate kinase OS=Streptococcus suis (str... [more]
PGK_STRR62.607e-1148.53Phosphoglycerate kinase OS=Streptococcus pneumonia... [more]
PGK_STRPS2.607e-1148.53Phosphoglycerate kinase OS=Streptococcus pneumonia... [more]
PGK_STRPN2.607e-1148.53Phosphoglycerate kinase OS=Streptococcus pneumonia... [more]
PGK_STRPM2.607e-1148.53Phosphoglycerate kinase OS=Streptococcus pyogenes ... [more]
PGK_STRPJ2.607e-1148.53Phosphoglycerate kinase OS=Streptococcus pneumonia... [more]
PGK_STRPI2.607e-1148.53Phosphoglycerate kinase OS=Streptococcus pneumonia... [more]
PGK_STRPF2.607e-1148.53Phosphoglycerate kinase OS=Streptococcus pyogenes ... [more]
PGK_STRP72.607e-1148.53Phosphoglycerate kinase OS=Streptococcus pneumonia... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_5989 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE57E02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK739602 ID=CK739602; Name=CK739602; organism=Citrus sinensis; type=EST; length=262bp
TAAGCTTGACCTTGCTACAACACTTCTTGCAAAGGCCAAGGCTAAAGGTG
TTAATCTTTTGTTACCCTCTGATGTGGTAATTGCTGACAAATTTGCTGCT
GACCCAAACAGCAAGGTTGTGCCAGCAACTGCCATTCCTGATGGCTGGAT
GGGATTGGATATTGGACCATATTCTGTTAAGACATTCAACGAAGCTTTAG
ATACTACCAAAACTGTCATCTGGAATGGCCCAATGGGAGTGTTTGAGTTT
GACAAGTTCGCT
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