CK739602

Overview
NameCK739602
Unique NameCK739602
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length262
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK739602 vs. ExPASy Swiss-Prot
Match: PGK_STRP4 (Phosphoglycerate kinase OS=Streptococcus pneumoniae serotype 19F (strain G54) GN=pgk PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 2.607e-11
Identity = 33/68 (48.53%), Postives = 43/68 (63.24%), Query Frame = 2
Query:   56 LLLPSDVVIADKFAADPNSKVVPATAIPDGWMGLDIGPYSVKTFNEALDTTKTVIWNGPMGVFEFDKF 259
            L+LP D   A+ FA     +     A+ +G++GLDIGP S+  F+EAL   KTV+WNGPMGVFE   F
Sbjct:  264 LILPVDSKEANAFAGYTEVRDTEGEAVSEGFLGLDIGPKSIAKFDEALTGAKTVVWNGPMGVFENPDF 331          
BLAST of CK739602 vs. ExPASy Swiss-Prot
Match: PGK_STRP3 (Phosphoglycerate kinase OS=Streptococcus pyogenes serotype M3 GN=pgk PE=3 SV=3)

HSP 1 Score: 67.3958 bits (163), Expect = 2.607e-11
Identity = 33/68 (48.53%), Postives = 43/68 (63.24%), Query Frame = 2
Query:   56 LLLPSDVVIADKFAADPNSKVVPATAIPDGWMGLDIGPYSVKTFNEALDTTKTVIWNGPMGVFEFDKF 259
            L+LP D   A+ FA     +     A+ +G++GLDIGP S+  F+EAL   KTV+WNGPMGVFE   F
Sbjct:  264 LILPVDSKEANAFAGYTEVRDTEGEAVSEGFLGLDIGPKSIAKFDEALTGAKTVVWNGPMGVFENPDF 331          
BLAST of CK739602 vs. ExPASy Swiss-Prot
Match: PGK_STRP2 (Phosphoglycerate kinase OS=Streptococcus pneumoniae serotype 2 (strain D39 / NCTC 7466) GN=pgk PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 2.607e-11
Identity = 33/68 (48.53%), Postives = 43/68 (63.24%), Query Frame = 2
Query:   56 LLLPSDVVIADKFAADPNSKVVPATAIPDGWMGLDIGPYSVKTFNEALDTTKTVIWNGPMGVFEFDKF 259
            L+LP D   A+ FA     +     A+ +G++GLDIGP S+  F+EAL   KTV+WNGPMGVFE   F
Sbjct:  264 LILPVDSKEANAFAGYTEVRDTEGEAVSEGFLGLDIGPKSIAKFDEALTGAKTVVWNGPMGVFENPDF 331          
BLAST of CK739602 vs. ExPASy Swiss-Prot
Match: PGK_STRA5 (Phosphoglycerate kinase OS=Streptococcus agalactiae serotype V GN=pgk PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 2.607e-11
Identity = 33/68 (48.53%), Postives = 43/68 (63.24%), Query Frame = 2
Query:   56 LLLPSDVVIADKFAADPNSKVVPATAIPDGWMGLDIGPYSVKTFNEALDTTKTVIWNGPMGVFEFDKF 259
            L+LP D   A+ FA     +     A+ +G++GLDIGP S+  F+EAL   KTV+WNGPMGVFE   F
Sbjct:  264 LILPVDSKEANAFAGYTEVRDTEGEAVSEGFLGLDIGPKSIAKFDEALTGAKTVVWNGPMGVFENPDF 331          
BLAST of CK739602 vs. ExPASy Swiss-Prot
Match: PGK_STRA3 (Phosphoglycerate kinase OS=Streptococcus agalactiae serotype III GN=pgk PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 2.607e-11
Identity = 33/68 (48.53%), Postives = 43/68 (63.24%), Query Frame = 2
Query:   56 LLLPSDVVIADKFAADPNSKVVPATAIPDGWMGLDIGPYSVKTFNEALDTTKTVIWNGPMGVFEFDKF 259
            L+LP D   A+ FA     +     A+ +G++GLDIGP S+  F+EAL   KTV+WNGPMGVFE   F
Sbjct:  264 LILPVDSKEANAFAGYTEVRDTEGEAVSEGFLGLDIGPKSIAKFDEALTGAKTVVWNGPMGVFENPDF 331          
BLAST of CK739602 vs. ExPASy Swiss-Prot
Match: PGK_STRA1 (Phosphoglycerate kinase OS=Streptococcus agalactiae serotype Ia GN=pgk PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 2.607e-11
Identity = 33/68 (48.53%), Postives = 43/68 (63.24%), Query Frame = 2
Query:   56 LLLPSDVVIADKFAADPNSKVVPATAIPDGWMGLDIGPYSVKTFNEALDTTKTVIWNGPMGVFEFDKF 259
            L+LP D   A+ FA     +     A+ +G++GLDIGP S+  F+EAL   KTV+WNGPMGVFE   F
Sbjct:  264 LILPVDSKEANAFAGYTEVRDTEGEAVSEGFLGLDIGPKSIAKFDEALTGAKTVVWNGPMGVFENPDF 331          
BLAST of CK739602 vs. ExPASy Swiss-Prot
Match: PGK_STAES (Phosphoglycerate kinase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=pgk PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 2.607e-11
Identity = 33/72 (45.83%), Postives = 42/72 (58.33%), Query Frame = 2
Query:   47 GVNLLLPSDVVIADKFAADPNSKVVPATAIPDGWMGLDIGPYSVKTFNEALDTTKTVIWNGPMGVFEFDKFA 262
            G  ++LP D  IA +F+ D     V    IP     +DIGP +V+ FN+ L    TV+WNGPMGVFEF  FA
Sbjct:  259 GDQIVLPVDCKIAKEFSNDAKITEVSINEIPSDQEAMDIGPKTVELFNKELQGAHTVVWNGPMGVFEFSNFA 330          
BLAST of CK739602 vs. ExPASy Swiss-Prot
Match: PGK_STAEQ (Phosphoglycerate kinase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=pgk PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 2.607e-11
Identity = 33/72 (45.83%), Postives = 42/72 (58.33%), Query Frame = 2
Query:   47 GVNLLLPSDVVIADKFAADPNSKVVPATAIPDGWMGLDIGPYSVKTFNEALDTTKTVIWNGPMGVFEFDKFA 262
            G  ++LP D  IA +F+ D     V    IP     +DIGP +V+ FN+ L    TV+WNGPMGVFEF  FA
Sbjct:  259 GDQIVLPVDCKIAKEFSNDAKITEVSINEIPSDQEAMDIGPKTVELFNKELQGAHTVVWNGPMGVFEFSNFA 330          
BLAST of CK739602 vs. ExPASy Swiss-Prot
Match: PGK_OPISI (Phosphoglycerate kinase OS=Opisthorchis sinensis GN=PGK PE=2 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 2.607e-11
Identity = 33/72 (45.83%), Postives = 44/72 (61.11%), Query Frame = 2
Query:   50 VNLLLPSDVVIADKFAADPNSKVVPAT-AIPDGWMGLDIGPYSVKTFNEALDTTKTVIWNGPMGVFEFDKFA 262
            V + LP D +  DKFA D N+        I D  MGLD GP +++ F + +   KT++WNGPMGVFE +KFA
Sbjct:  276 VKIHLPVDFITGDKFAEDANTGTATVEPGIRDTHMGLDGGPKTMEEFCKVISRAKTIVWNGPMGVFEMEKFA 347          
BLAST of CK739602 vs. ExPASy Swiss-Prot
Match: PGK_MESSB (Phosphoglycerate kinase OS=Mesorhizobium sp. (strain BNC1) GN=pgk PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 2.607e-11
Identity = 31/71 (43.66%), Postives = 43/71 (60.56%), Query Frame = 2
Query:   47 GVNLLLPSDVVIADKFAADPNSKVVPATAIPDGWMGLDIGPYSVKTFNEALDTTKTVIWNGPMGVFEFDKF 259
            G  ++LP D V+A KF A   ++ V   A+P+  M LD+GP SV+   E LD   T++WNGP+G FE   F
Sbjct:  259 GCAIILPVDAVVARKFEAGAETETVDIDAVPEDAMILDVGPKSVEKVKEWLDRADTLVWNGPLGAFELSPF 329          
The following BLAST results are available for this feature:
BLAST of CK739602 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 400
Match NameE-valueIdentityDescription
PGK_STRP42.607e-1148.53Phosphoglycerate kinase OS=Streptococcus pneumonia... [more]
PGK_STRP32.607e-1148.53Phosphoglycerate kinase OS=Streptococcus pyogenes ... [more]
PGK_STRP22.607e-1148.53Phosphoglycerate kinase OS=Streptococcus pneumonia... [more]
PGK_STRA52.607e-1148.53Phosphoglycerate kinase OS=Streptococcus agalactia... [more]
PGK_STRA32.607e-1148.53Phosphoglycerate kinase OS=Streptococcus agalactia... [more]
PGK_STRA12.607e-1148.53Phosphoglycerate kinase OS=Streptococcus agalactia... [more]
PGK_STAES2.607e-1145.83Phosphoglycerate kinase OS=Staphylococcus epidermi... [more]
PGK_STAEQ2.607e-1145.83Phosphoglycerate kinase OS=Staphylococcus epidermi... [more]
PGK_OPISI2.607e-1145.83Phosphoglycerate kinase OS=Opisthorchis sinensis G... [more]
PGK_MESSB2.607e-1143.66Phosphoglycerate kinase OS=Mesorhizobium sp. (stra... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_5989 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE57E02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK739602 ID=CK739602; Name=CK739602; organism=Citrus sinensis; type=EST; length=262bp
TAAGCTTGACCTTGCTACAACACTTCTTGCAAAGGCCAAGGCTAAAGGTG
TTAATCTTTTGTTACCCTCTGATGTGGTAATTGCTGACAAATTTGCTGCT
GACCCAAACAGCAAGGTTGTGCCAGCAACTGCCATTCCTGATGGCTGGAT
GGGATTGGATATTGGACCATATTCTGTTAAGACATTCAACGAAGCTTTAG
ATACTACCAAAACTGTCATCTGGAATGGCCCAATGGGAGTGTTTGAGTTT
GACAAGTTCGCT
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