CK739602

Overview
NameCK739602
Unique NameCK739602
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length262
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK739602 vs. ExPASy Swiss-Prot
Match: PGK_STRSV (Phosphoglycerate kinase OS=Streptococcus sanguinis (strain SK36) GN=pgk PE=3 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 5.807e-11
Identity = 34/68 (50.00%), Postives = 42/68 (61.76%), Query Frame = 2
Query:   56 LLLPSDVVIADKFAADPNSKVVPATAIPDGWMGLDIGPYSVKTFNEALDTTKTVIWNGPMGVFEFDKF 259
            L+LP D   A+ FA     K     A+  G++GLDIGP S+  F+EAL   KTV+WNGPMGVFE   F
Sbjct:  264 LVLPVDSKEANAFADYTEVKDTEGEAVDPGFLGLDIGPKSIAKFDEALTGAKTVVWNGPMGVFENPDF 331          
BLAST of CK739602 vs. ExPASy Swiss-Prot
Match: PGK_STRPZ (Phosphoglycerate kinase OS=Streptococcus pyogenes serotype M49 (strain NZ131) GN=pgk PE=3 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 5.807e-11
Identity = 32/68 (47.06%), Postives = 43/68 (63.24%), Query Frame = 2
Query:   56 LLLPSDVVIADKFAADPNSKVVPATAIPDGWMGLDIGPYSVKTFNEALDTTKTVIWNGPMGVFEFDKF 259
            L+LP D   A+ FA     +     A+ +G++GLDIGP S+  F++AL   KTV+WNGPMGVFE   F
Sbjct:  264 LILPVDSKEANAFAGYTEVRDTEGEAVSEGFLGLDIGPKSIAEFDQALTGAKTVVWNGPMGVFENPDF 331          
BLAST of CK739602 vs. ExPASy Swiss-Prot
Match: PGK_STRPG (Phosphoglycerate kinase OS=Streptococcus pyogenes serotype M5 (strain Manfredo) GN=pgk PE=3 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 5.807e-11
Identity = 32/68 (47.06%), Postives = 43/68 (63.24%), Query Frame = 2
Query:   56 LLLPSDVVIADKFAADPNSKVVPATAIPDGWMGLDIGPYSVKTFNEALDTTKTVIWNGPMGVFEFDKF 259
            L+LP D   A+ FA     +     A+ +G++GLDIGP S+  F++AL   KTV+WNGPMGVFE   F
Sbjct:  264 LILPVDSKEANAFAGYTEVRDTEGEAVSEGFLGLDIGPKSIAEFDQALTGAKTVVWNGPMGVFENPDF 331          
BLAST of CK739602 vs. ExPASy Swiss-Prot
Match: PGK_STRPC (Phosphoglycerate kinase OS=Streptococcus pyogenes serotype M12 (strain MGAS9429) GN=pgk PE=3 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 5.807e-11
Identity = 32/68 (47.06%), Postives = 43/68 (63.24%), Query Frame = 2
Query:   56 LLLPSDVVIADKFAADPNSKVVPATAIPDGWMGLDIGPYSVKTFNEALDTTKTVIWNGPMGVFEFDKF 259
            L+LP D   A+ FA     +     A+ +G++GLDIGP S+  F++AL   KTV+WNGPMGVFE   F
Sbjct:  264 LILPVDSKEANAFAGYTEVRDTEGEAVSEGFLGLDIGPKSIAEFDQALTGAKTVVWNGPMGVFENPDF 331          
BLAST of CK739602 vs. ExPASy Swiss-Prot
Match: PGK_STRPB (Phosphoglycerate kinase OS=Streptococcus pyogenes serotype M12 (strain MGAS2096) GN=pgk PE=3 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 5.807e-11
Identity = 32/68 (47.06%), Postives = 43/68 (63.24%), Query Frame = 2
Query:   56 LLLPSDVVIADKFAADPNSKVVPATAIPDGWMGLDIGPYSVKTFNEALDTTKTVIWNGPMGVFEFDKF 259
            L+LP D   A+ FA     +     A+ +G++GLDIGP S+  F++AL   KTV+WNGPMGVFE   F
Sbjct:  264 LILPVDSKEANAFAGYTEVRDTEGEAVSEGFLGLDIGPKSIAEFDQALTGAKTVVWNGPMGVFENPDF 331          
BLAST of CK739602 vs. ExPASy Swiss-Prot
Match: PGK_STRP6 (Phosphoglycerate kinase OS=Streptococcus pyogenes serotype M6 GN=pgk PE=1 SV=3)

HSP 1 Score: 66.2402 bits (160), Expect = 5.807e-11
Identity = 32/68 (47.06%), Postives = 43/68 (63.24%), Query Frame = 2
Query:   56 LLLPSDVVIADKFAADPNSKVVPATAIPDGWMGLDIGPYSVKTFNEALDTTKTVIWNGPMGVFEFDKF 259
            L+LP D   A+ FA     +     A+ +G++GLDIGP S+  F++AL   KTV+WNGPMGVFE   F
Sbjct:  264 LILPVDSKEANAFAGYTEVRDTEGEAVSEGFLGLDIGPKSIAEFDQALTGAKTVVWNGPMGVFENPDF 331          
BLAST of CK739602 vs. ExPASy Swiss-Prot
Match: PGK_STRP1 (Phosphoglycerate kinase OS=Streptococcus pyogenes serotype M1 GN=pgk PE=3 SV=2)

HSP 1 Score: 66.2402 bits (160), Expect = 5.807e-11
Identity = 32/68 (47.06%), Postives = 43/68 (63.24%), Query Frame = 2
Query:   56 LLLPSDVVIADKFAADPNSKVVPATAIPDGWMGLDIGPYSVKTFNEALDTTKTVIWNGPMGVFEFDKF 259
            L+LP D   A+ FA     +     A+ +G++GLDIGP S+  F++AL   KTV+WNGPMGVFE   F
Sbjct:  264 LILPVDSKEANAFAGYTEVRDTEGEAVSEGFLGLDIGPKSIAEFDQALTGAKTVVWNGPMGVFENPDF 331          
BLAST of CK739602 vs. ExPASy Swiss-Prot
Match: PGK_SILPO (Phosphoglycerate kinase OS=Silicibacter pomeroyi GN=pgk PE=3 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 5.807e-11
Identity = 29/71 (40.85%), Postives = 44/71 (61.97%), Query Frame = 2
Query:   47 GVNLLLPSDVVIADKFAADPNSKVVPATAIPDGWMGLDIGPYSVKTFNEALDTTKTVIWNGPMGVFEFDKF 259
            G  ++LPSDVV+A+KF +    +++P    PD  M LD GP S+       + ++T+IWNGP+G FE + F
Sbjct:  257 GCTIVLPSDVVVAEKFESHAPHQILPNDRCPDEGMILDAGPDSLAAIKAIFEKSRTLIWNGPLGAFELEPF 327          
BLAST of CK739602 vs. ExPASy Swiss-Prot
Match: PGK_PSESM (Phosphoglycerate kinase OS=Pseudomonas syringae pv. tomato GN=pgk PE=3 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 5.807e-11
Identity = 32/70 (45.71%), Postives = 46/70 (65.71%), Query Frame = 2
Query:   50 VNLLLPSDVVIADKFAADPNSKVVPATAIPDGWMGLDIGPYSVKTFNEALDTTKTVIWNGPMGVFEFDKF 259
            V++ LP+DVV+A +FA    + V     + D  M LDIGP +   F E L ++ T++WNGP+GVFEFD+F
Sbjct:  249 VSVPLPTDVVVAKEFAESATATVKLIADVADDDMILDIGPQTAAHFAELLKSSGTILWNGPVGVFEFDQF 318          
BLAST of CK739602 vs. ExPASy Swiss-Prot
Match: PGK_PSEPW (Phosphoglycerate kinase OS=Pseudomonas putida (strain W619) GN=pgk PE=3 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 5.807e-11
Identity = 32/70 (45.71%), Postives = 45/70 (64.29%), Query Frame = 2
Query:   50 VNLLLPSDVVIADKFAADPNSKVVPATAIPDGWMGLDIGPYSVKTFNEALDTTKTVIWNGPMGVFEFDKF 259
            V++ LP DVV+A +FA    + V     +    M LDIGP +   F E L ++KT++WNGP+GVFEFD+F
Sbjct:  249 VSVPLPVDVVVAKEFAESAEATVKAIADVAADDMILDIGPQTAANFAELLKSSKTILWNGPVGVFEFDQF 318          
The following BLAST results are available for this feature:
BLAST of CK739602 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 400
Match NameE-valueIdentityDescription
PGK_STRSV5.807e-1150.00Phosphoglycerate kinase OS=Streptococcus sanguinis... [more]
PGK_STRPZ5.807e-1147.06Phosphoglycerate kinase OS=Streptococcus pyogenes ... [more]
PGK_STRPG5.807e-1147.06Phosphoglycerate kinase OS=Streptococcus pyogenes ... [more]
PGK_STRPC5.807e-1147.06Phosphoglycerate kinase OS=Streptococcus pyogenes ... [more]
PGK_STRPB5.807e-1147.06Phosphoglycerate kinase OS=Streptococcus pyogenes ... [more]
PGK_STRP65.807e-1147.06Phosphoglycerate kinase OS=Streptococcus pyogenes ... [more]
PGK_STRP15.807e-1147.06Phosphoglycerate kinase OS=Streptococcus pyogenes ... [more]
PGK_SILPO5.807e-1140.85Phosphoglycerate kinase OS=Silicibacter pomeroyi G... [more]
PGK_PSESM5.807e-1145.71Phosphoglycerate kinase OS=Pseudomonas syringae pv... [more]
PGK_PSEPW5.807e-1145.71Phosphoglycerate kinase OS=Pseudomonas putida (str... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_5989 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE57E02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK739602 ID=CK739602; Name=CK739602; organism=Citrus sinensis; type=EST; length=262bp
TAAGCTTGACCTTGCTACAACACTTCTTGCAAAGGCCAAGGCTAAAGGTG
TTAATCTTTTGTTACCCTCTGATGTGGTAATTGCTGACAAATTTGCTGCT
GACCCAAACAGCAAGGTTGTGCCAGCAACTGCCATTCCTGATGGCTGGAT
GGGATTGGATATTGGACCATATTCTGTTAAGACATTCAACGAAGCTTTAG
ATACTACCAAAACTGTCATCTGGAATGGCCCAATGGGAGTGTTTGAGTTT
GACAAGTTCGCT
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