CK739614

Overview
NameCK739614
Unique NameCK739614
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length385
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7835 contig Csv1_Contig7835:328..708. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK739614 vs. ExPASy Swiss-Prot
Match: COMT2_OCIBA (Caffeic acid 3-O-methyltransferase 2 OS=Ocimum basilicum GN=COMT2 PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 3.475e-24
Identity = 60/106 (56.60%), Postives = 69/106 (65.09%), Query Frame = 2
Query:   65 LPDGKVERLYGLAPVCKFPH*K*RWCYTFRSFVS*TKTRFSWRAGTT*KMQCLKVGIPFNKAYGMNAFDYHGKDLRFNKIFNNGMSSHSTITMKKILENYKGFEGL 382
            LPDG V+RLYGLAPVCKF   K     +        + +    +    K   L  GIPFNKAYGM AF+YHG D RFNK+FN GMS+HSTITMKKILE Y GF+GL
Sbjct:   95 LPDGGVQRLYGLAPVCKFLT-KNEDGVSMAPLALMNQDKVLMESWYHLKDAVLDGGIPFNKAYGMTAFEYHGTDPRFNKVFNQGMSNHSTITMKKILETYTGFDGL 199          
BLAST of CK739614 vs. ExPASy Swiss-Prot
Match: COMT1_CAPAN (Caffeic acid 3-O-methyltransferase OS=Capsicum annuum GN=COMT PE=2 SV=2)

HSP 1 Score: 109.768 bits (273), Expect = 4.539e-24
Identity = 59/107 (55.14%), Postives = 70/107 (65.42%), Query Frame = 2
Query:   65 LPDGKVERLYGLAPVCKFPH*K*RWCYTFRSFVS*TKTRFSWRAGTT*KMQCLKVGIPFNKAYGMNAFDYHGKDLRFNKIFNNGMSSHSTITMKKILENYKGFEGLN 385
            LPDG+VERLY LAPVCK    K     +    +   + +    +        L  G+PFNKAYGM AF+YHG D RFNK+FN GMS HST+TMKKILE+YKGFEGLN
Sbjct:   93 LPDGRVERLYSLAPVCKLLT-KNADGVSVAPLLLMNQDKVLMESWYHLTDAVLDGGVPFNKAYGMTAFEYHGTDPRFNKVFNRGMSDHSTMTMKKILEDYKGFEGLN 198          

HSP 2 Score: 67.781 bits (164), Expect = 1.978e-11
Identity = 40/77 (51.95%), Postives = 50/77 (64.94%), Query Frame = 1
Query:    1 VLDRILRLLASYSVLNCSLRKSPRRQS*EALWPCPRL*IPSLKMKMVLHFPIFCLMNQDKVLMESWYYLKDAVLEGG 231
            +LDR+LRLLA+YSVLNC+LR  P  +        P   + +     V   P+  LMNQDKVLMESWY+L DAVL+GG
Sbjct:   72 MLDRMLRLLATYSVLNCTLRTLPDGRVERLYSLAPVCKLLTKNADGVSVAPLL-LMNQDKVLMESWYHLTDAVLDGG 147          
BLAST of CK739614 vs. ExPASy Swiss-Prot
Match: COMT2_POPTM (Caffeic acid 3-O-methyltransferase 2 OS=Populus tremuloides GN=OMT2 PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 1.011e-23
Identity = 61/113 (53.98%), Postives = 71/113 (62.83%), Query Frame = 2
Query:   44 LIALCANLPDGKVERLYGLAPVCKFPH*K*RWCYTFRSFVS*TKTRFSWRAGTT*KMQCLKVGIPFNKAYGMNAFDYHGKDLRFNKIFNNGMSSHSTITMKKILENYKGFEGL 382
            LI    +LPDGKVERLYGLA VCKF   +     +        + +    +    K   L+ GIPFNKAYGM AF+YHG D RFNK+FN GMS HS + MKKILE YKGFEGL
Sbjct:   89 LICSLRDLPDGKVERLYGLASVCKFLT-RNEDGVSVSPLCLMNQDKVLMESWYHLKDAILEGGIPFNKAYGMTAFEYHGTDPRFNKVFNKGMSVHSKMAMKKILETYKGFEGL 200          

HSP 2 Score: 72.4034 bits (176), Expect = 8.031e-13
Identity = 42/77 (54.55%), Postives = 52/77 (67.53%), Query Frame = 1
Query:    1 VLDRILRLLASYSVLNCSLRKSPRRQS*EALWPCPRL*IPSLKMKMVLHFPIFCLMNQDKVLMESWYYLKDAVLEGG 231
            +LDRILRLLASYS+L CSLR  P  +  E L+    +     + +  +     CLMNQDKVLMESWY+LKDA+LEGG
Sbjct:   75 MLDRILRLLASYSILICSLRDLPDGKV-ERLYGLASVCKFLTRNEDGVSVSPLCLMNQDKVLMESWYHLKDAILEGG 150          
BLAST of CK739614 vs. ExPASy Swiss-Prot
Match: COMT1_OCIBA (Caffeic acid 3-O-methyltransferase 1 OS=Ocimum basilicum GN=COMT1 PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 1.321e-23
Identity = 59/106 (55.66%), Postives = 68/106 (64.15%), Query Frame = 2
Query:   65 LPDGKVERLYGLAPVCKFPH*K*RWCYTFRSFVS*TKTRFSWRAGTT*KMQCLKVGIPFNKAYGMNAFDYHGKDLRFNKIFNNGMSSHSTITMKKILENYKGFEGL 382
            LPDG VERLYGLAPVCKF   K     +        + +    +        +  GIPFNKAYGM AF+YHG D RFNK+FN GMS+HSTITMKKILE Y GF+GL
Sbjct:   95 LPDGGVERLYGLAPVCKFLT-KNEDGVSMAPLTLMNQDKVLMESWYHLSDAVVDGGIPFNKAYGMTAFEYHGTDPRFNKVFNQGMSNHSTITMKKILETYTGFDGL 199          
BLAST of CK739614 vs. ExPASy Swiss-Prot
Match: OMT1_ARATH (Quercetin 3-O-methyltransferase 1 OS=Arabidopsis thaliana GN=OMT1 PE=1 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 2.253e-23
Identity = 60/114 (52.63%), Postives = 73/114 (64.04%), Query Frame = 2
Query:   47 IALCAN--LPDGKVERLYGLAPVCKFPH*K*RWCYTFRSFVS*TKTRFSWRAGTT*KMQCLKVGIPFNKAYGMNAFDYHGKDLRFNKIFNNGMSSHSTITMKKILENYKGFEGL 382
            +  C+N  L    VER+YGL PVCK+   K     +  +     + +    +    K   L  GIPFNKAYGM+AF+YHG D RFNK+FNNGMS+HSTITMKKILE YKGFEGL
Sbjct:   87 VLTCSNRKLSGDGVERIYGLGPVCKYLT-KNEDGVSIAALCLMNQDKVLMESWYHLKDAILDGGIPFNKAYGMSAFEYHGTDPRFNKVFNNGMSNHSTITMKKILETYKGFEGL 199          

HSP 2 Score: 68.5514 bits (166), Expect = 1.160e-11
Identity = 40/77 (51.95%), Postives = 49/77 (63.64%), Query Frame = 1
Query:    1 VLDRILRLLASYSVLNCSLRKSPRRQS*EALWPCPRL*IPSLKMKMVLHFPIFCLMNQDKVLMESWYYLKDAVLEGG 231
            +LDRILRLL SYSVL CS RK       E ++    +     K +  +     CLMNQDKVLMESWY+LKDA+L+GG
Sbjct:   74 MLDRILRLLTSYSVLTCSNRKLSG-DGVERIYGLGPVCKYLTKNEDGVSIAALCLMNQDKVLMESWYHLKDAILDGG 149          
BLAST of CK739614 vs. ExPASy Swiss-Prot
Match: COMT1_CAPCH (Caffeic acid 3-O-methyltransferase OS=Capsicum chinense GN=COMT PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 1.460e-22
Identity = 56/107 (52.34%), Postives = 69/107 (64.49%), Query Frame = 2
Query:   65 LPDGKVERLYGLAPVCKFPH*K*RWCYTFRSFVS*TKTRFSWRAGTT*KMQCLKVGIPFNKAYGMNAFDYHGKDLRFNKIFNNGMSSHSTITMKKILENYKGFEGLN 385
            LPDG+VERLY LAPVCKF   K     +    +   + +    +        L  G+PFNKAYGM  F+YHG D RFNK+FN GMS H+T++MKKILE+Y GFEGLN
Sbjct:   93 LPDGRVERLYSLAPVCKFLT-KNGDGVSIAPILLMNQDKVLMESWYHLTDAVLDGGVPFNKAYGMTTFEYHGTDPRFNKVFNCGMSDHTTLSMKKILEDYTGFEGLN 198          

HSP 2 Score: 65.4698 bits (158), Expect = 9.817e-11
Identity = 40/77 (51.95%), Postives = 48/77 (62.34%), Query Frame = 1
Query:    1 VLDRILRLLASYSVLNCSLRKSPRRQS*EALWPCPRL*IPSLKMKMVLHFPIFCLMNQDKVLMESWYYLKDAVLEGG 231
            +LDR+ RLLA+YSVLNC+LR  P  +        P     +     V   PI  LMNQDKVLMESWY+L DAVL+GG
Sbjct:   72 MLDRMFRLLATYSVLNCTLRTLPDGRVERLYSLAPVCKFLTKNGDGVSIAPIL-LMNQDKVLMESWYHLTDAVLDGG 147          
BLAST of CK739614 vs. ExPASy Swiss-Prot
Match: COMT1_EUCGL (Caffeic acid 3-O-methyltransferase (Fragment) OS=Eucalyptus globulus GN=COMT1 PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 7.247e-22
Identity = 61/110 (55.45%), Postives = 70/110 (63.64%), Query Frame = 2
Query:   53 LCANLPDGKVERLYGLAPVCKFPH*K*RWCYTFRSFVS*TKTRFSWRAGTT*KMQCLKVGIPFNKAYGMNAFDYHGKDLRFNKIFNNGMSSHSTITMKKILENYKGFEGL 382
            LC +LP+GKVERLYGLAP+CKF   K     +        + R    +    K   L+ GIPF+KA+GM AFDY G D RFNKIFN  MS HSTI MKKILE Y GFEGL
Sbjct:   76 LC-DLPEGKVERLYGLAPLCKFLV-KNEDGVSLAPLRLIDQDRVFLESWYYMKDAILEGGIPFHKAHGMTAFDYPGTDPRFNKIFNRAMSDHSTIMMKKILETYNGFEGL 183          
BLAST of CK739614 vs. ExPASy Swiss-Prot
Match: COMT1_ZINEL (Caffeic acid 3-O-methyltransferase OS=Zinnia elegans PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 1.236e-21
Identity = 57/122 (46.72%), Postives = 71/122 (58.20%), Query Frame = 2
Query:   17 CAFWRAIQSLIALCANLPDGKVERLYGLAPVCKFPH*K*RWCYTFRSFVS*TKTRFSWRAGTT*KMQCLKVGIPFNKAYGMNAFDYHGKDLRFNKIFNNGMSSHSTITMKKILENYKGFEGL 382
            C+   +   L        DG  ER YGLAPVCKF   K     +    +   + +    +    K   L  GIPFNKAYGM+AF+YHGKD RFNK+FN+GM +HST+TMKKI+E Y GF GL
Sbjct:   72 CSLLASYSVLTCTLKETADGCAERFYGLAPVCKFLI-KNDAGVSLAPLLLMNQDKVLMESWYYLKDPVLDGGIPFNKAYGMSAFEYHGKDQRFNKVFNSGMFNHSTMTMKKIVELYNGFSGL 192          
BLAST of CK739614 vs. ExPASy Swiss-Prot
Match: COMT1_MEDSA (Caffeic acid 3-O-methyltransferase OS=Medicago sativa PE=1 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 2.109e-21
Identity = 57/104 (54.81%), Postives = 66/104 (63.46%), Query Frame = 2
Query:   71 DGKVERLYGLAPVCKFPH*K*RWCYTFRSFVS*TKTRFSWRAGTT*KMQCLKVGIPFNKAYGMNAFDYHGKDLRFNKIFNNGMSSHSTITMKKILENYKGFEGL 382
            DGKV+RLYGLA V K+   K     +  +     + +    +    K   L  GIPFNKAYGM AF+YHG D RFNK+FN GMS HSTITMKKILE Y GFEGL
Sbjct:   99 DGKVQRLYGLATVAKYLV-KNEDGVSISALNLMNQDKVLMESWYHLKDAVLDGGIPFNKAYGMTAFEYHGTDPRFNKVFNKGMSDHSTITMKKILETYTGFEGL 201          
BLAST of CK739614 vs. ExPASy Swiss-Prot
Match: IMT1_MESCR (Inositol 4-methyltransferase OS=Mesembryanthemum crystallinum GN=IMT1 PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 9.434e-21
Identity = 28/51 (54.90%), Postives = 38/51 (74.51%), Query Frame = 2
Query:  221 LKVGIPFNKAYGMNAFDYHGKDLRFNKIFNNGMSSHSTITMKKILENYKGF 373
            L+ G+PF +A+GM  FDY G D RFN +FN GM+ H+ + MKK+L+NY GF
Sbjct:  149 LEGGVPFKRAHGMIQFDYTGTDERFNHVFNQGMAHHTILVMKKLLDNYNGF 199          

HSP 2 Score: 51.6026 bits (122), Expect = 9.434e-21
Identity = 33/77 (42.86%), Postives = 44/77 (57.14%), Query Frame = 1
Query:    1 VLDRILRLLASYSVLNCSLRKSPRRQS*EALWPCPRL*IPSLKMKMVLHFPIFCLMNQDKVLMESWYYLKDAVLEGG 231
            +LDR+LRLLAS+SVL C L+K     S     P P     +         P+  L + DKV+MESW++L D +LEGG
Sbjct:   78 LLDRMLRLLASHSVLTCKLQKG-EGGSQRVYGPAPLCNYLASNDGQGSLGPLLVL-HHDKVMMESWFHLNDYILEGG 152          
The following BLAST results are available for this feature:
BLAST of CK739614 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 26
Match NameE-valueIdentityDescription
COMT2_OCIBA3.475e-2456.60Caffeic acid 3-O-methyltransferase 2 OS=Ocimum bas... [more]
COMT1_CAPAN4.539e-2455.14Caffeic acid 3-O-methyltransferase OS=Capsicum ann... [more]
COMT2_POPTM1.011e-2353.98Caffeic acid 3-O-methyltransferase 2 OS=Populus tr... [more]
COMT1_OCIBA1.321e-2355.66Caffeic acid 3-O-methyltransferase 1 OS=Ocimum bas... [more]
OMT1_ARATH2.253e-2352.63Quercetin 3-O-methyltransferase 1 OS=Arabidopsis t... [more]
COMT1_CAPCH1.460e-2252.34Caffeic acid 3-O-methyltransferase OS=Capsicum chi... [more]
COMT1_EUCGL7.247e-2255.45Caffeic acid 3-O-methyltransferase (Fragment) OS=E... [more]
COMT1_ZINEL1.236e-2146.72Caffeic acid 3-O-methyltransferase OS=Zinnia elega... [more]
COMT1_MEDSA2.109e-2154.81Caffeic acid 3-O-methyltransferase OS=Medicago sat... [more]
IMT1_MESCR9.434e-2154.90Inositol 4-methyltransferase OS=Mesembryanthemum c... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUSDA-FP_6001 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE57F04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK739614 ID=CK739614; Name=CK739614; organism=Citrus sinensis; type=EST; length=385bp
GTGCTTGATCGTATATTGCGCCTTCTGGCGAGCTATTCAGTCCTTAATTG
CTCTTTGCGCAAATCTCCCCGACGGCAAAGTTGAGAGGCTTTATGGCCTT
GCCCCCGTTTGTAAATTCCCTCACTAAAAATGAAGATGGTGTTACACTTT
CCGATCTTTTGTCTCATGAACCAAGACAAGGTTCTCATGGAGAGCTGGTA
CTACTTAAAAGATGCAGTGCTTGAAGGTGGGCATTCCATTTAACAAGGCC
TATGGGATGAATGCATTCGATTACCATGGCAAAGATCTAAGATTCAACAA
GATTTTCAACAATGGAATGTCTTCTCATTCTACCATTACCATGAAGAAAA
TTCTTGAAAATTACAAAGGGTTTGAAGGCCTCAAC
back to top