CK739614

Overview
NameCK739614
Unique NameCK739614
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length385
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7835 contig Csv1_Contig7835:328..708. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK739614 vs. ExPASy Swiss-Prot
Match: OMT2_CHRAE (Quercetin 3-O-methyltransferase 2 OS=Chrysosplenium americanum GN=OMT2 PE=1 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 8.859e-20
Identity = 49/100 (49.00%), Postives = 66/100 (66.00%), Query Frame = 2
Query:   83 ERLYGLAPVCKFPH*K*RWCYTFRSFVS*TKTRFSWRAGTT*KMQCLKVGIPFNKAYGMNAFDYHGKDLRFNKIFNNGMSSHSTITMKKILENYKGFEGL 382
            +R+YGLAPVCK+   K +   +  +     + +    +    K   L  GIPFNKAYGM++F+YHG D RFNK+FN GMS HSTITMKK+ + Y+GF+GL
Sbjct:   79 QRVYGLAPVCKYLT-KNQDGVSIAALCLMNQDKVLMESWYHLKDAVLDGGIPFNKAYGMSSFEYHGTDPRFNKVFNRGMSDHSTITMKKVFQTYQGFQGL 177          

HSP 2 Score: 67.3958 bits (163), Expect = 2.583e-11
Identity = 38/77 (49.35%), Postives = 49/77 (63.64%), Query Frame = 1
Query:    1 VLDRILRLLASYSVLNCSLRKSPRRQS*EALWPCPRL*IPSLKMKMVLHFPIFCLMNQDKVLMESWYYLKDAVLEGG 231
            ++DRILRLL+ YSV+ CS+R    ++       C  L     K +  +     CLMNQDKVLMESWY+LKDAVL+GG
Sbjct:   55 MVDRILRLLSCYSVVTCSVRSVDDQRVYGLAPVCKYL----TKNQDGVSIAALCLMNQDKVLMESWYHLKDAVLDGG 127          
BLAST of CK739614 vs. ExPASy Swiss-Prot
Match: OMT1_CHRAE (Quercetin 3-O-methyltransferase 1 OS=Chrysosplenium americanum GN=OMT1 PE=1 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 1.511e-19
Identity = 49/100 (49.00%), Postives = 66/100 (66.00%), Query Frame = 2
Query:   83 ERLYGLAPVCKFPH*K*RWCYTFRSFVS*TKTRFSWRAGTT*KMQCLKVGIPFNKAYGMNAFDYHGKDLRFNKIFNNGMSSHSTITMKKILENYKGFEGL 382
            +R+YGLAPVCK+   K +   +  +     + +    +    K   L  GIPFNKAYGM++F+YHG D RFNK+FN GMS HSTITMKK+ + Y+GF+GL
Sbjct:   79 QRVYGLAPVCKYLT-KNQDGVSIAALCLMNQDKVLMESWYHLKDAVLDGGIPFNKAYGMSSFEYHGTDPRFNKVFNRGMSDHSTITMKKVFQAYQGFQGL 177          

HSP 2 Score: 67.3958 bits (163), Expect = 2.583e-11
Identity = 38/77 (49.35%), Postives = 49/77 (63.64%), Query Frame = 1
Query:    1 VLDRILRLLASYSVLNCSLRKSPRRQS*EALWPCPRL*IPSLKMKMVLHFPIFCLMNQDKVLMESWYYLKDAVLEGG 231
            ++DRILRLL+ YSV+ CS+R    ++       C  L     K +  +     CLMNQDKVLMESWY+LKDAVL+GG
Sbjct:   55 MVDRILRLLSCYSVVTCSVRSVDDQRVYGLAPVCKYL----TKNQDGVSIAALCLMNQDKVLMESWYHLKDAVLDGG 127          
BLAST of CK739614 vs. ExPASy Swiss-Prot
Match: COMT1_MAIZE (Caffeic acid 3-O-methyltransferase OS=Zea mays PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 3.151e-17
Identity = 49/111 (44.14%), Postives = 61/111 (54.95%), Query Frame = 2
Query:   71 DGKVERLYGLAPVCKFPH*K*RWCYTFRSFVS*T------KTRFSWRAGTT*KMQCLKVGIPFNKAYGMNAFDYHGKDLRFNKIFNNGMSSHSTITMKKILENYKGFEGLN 385
            DG+ ER Y  APVCK       W       VS        + +    +    K   L  GIPFNKAYGM AF+YHG D RFN++FN GM +HS I  KK+L+ Y GFEG++
Sbjct:  100 DGRYERRYSAAPVCK-------WLTPNEDGVSMAALALMNQDKVLMESWYYLKDAVLDGGIPFNKAYGMTAFEYHGTDARFNRVFNEGMKNHSVIITKKLLDFYTGFEGVS 203          
BLAST of CK739614 vs. ExPASy Swiss-Prot
Match: COMT1_SACOF (Caffeic acid 3-O-methyltransferase OS=Saccharum officinarum GN=COMT PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 2.667e-16
Identity = 50/111 (45.05%), Postives = 60/111 (54.05%), Query Frame = 2
Query:   71 DGKVERLYGLAPVCKFPH*K*RWCYTFRSFVS*T------KTRFSWRAGTT*KMQCLKVGIPFNKAYGMNAFDYHGKDLRFNKIFNNGMSSHSTITMKKILENYKGFEGLN 385
            DGK ER Y  APV K       W       VS        + +    +    K   L  GIPFNKAYGM AF+YHG D RFN++FN GM +HS I  KK+LE Y GFEG++
Sbjct:   98 DGKYERRYSAAPVGK-------WLTPNEDGVSMAALTLMNQDKVLMESWYYLKDAVLDGGIPFNKAYGMTAFEYHGTDPRFNRVFNEGMKNHSVIITKKLLEFYTGFEGVS 201          
BLAST of CK739614 vs. ExPASy Swiss-Prot
Match: OMT1_ORYSJ (Quercetin 3-O-methyltransferase 1 OS=Oryza sativa subsp. japonica GN=ROMT-9 PE=1 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 5.942e-16
Identity = 47/108 (43.52%), Postives = 58/108 (53.70%), Query Frame = 2
Query:   71 DGKVERLYGLAPVCKFPH*K*RWCYTFRSFVS*T------KTRFSWRAGTT*KMQCLKVGIPFNKAYGMNAFDYHGKDLRFNKIFNNGMSSHSTITMKKILENYKGFE 376
            DGK+ R Y  APVCK       W       VS        + +    +    K   L  GIPFNKAYGM AF+YHG D RFN++FN GM +HS I  KK+L+ Y GF+
Sbjct:  103 DGKLSRRYAAAPVCK-------WLTPNEDGVSMAALALMNQDKVLMESWYYLKDAVLDGGIPFNKAYGMTAFEYHGTDARFNRVFNEGMKNHSVIITKKLLDLYTGFD 203          
BLAST of CK739614 vs. ExPASy Swiss-Prot
Match: SMT_COPJA ((S)-scoulerine 9-O-methyltransferase OS=Coptis japonica GN=SMT PE=1 SV=1)

HSP 1 Score: 53.1434 bits (126), Expect = 2.518e-12
Identity = 23/50 (46.00%), Postives = 33/50 (66.00%), Query Frame = 2
Query:  233 IPFNKAYGMNAFDYHGKDLRFNKIFNNGMSSHSTITMKKILENYKGFEGL 382
            IPF++ +GM+ F Y GK+ R NK FN  M + STI   ++ + YKGF+ L
Sbjct:  167 IPFDRTHGMDFFQYAGKEERVNKSFNQAMGAGSTIAFDEVFKVYKGFDNL 216          

HSP 2 Score: 37.7354 bits (86), Expect = 2.518e-12
Identity = 30/76 (39.47%), Postives = 41/76 (53.95%), Query Frame = 1
Query:    4 LDRILRLLASYSVLNCSLRKSPRRQS*EALWPCPRL*IPSLKMKMVLHFPIFCLMNQDKVLMESWYYLKDAVLEGG 231
            LDRILR+L + S+L+ S  KS R         C  L     K+ +V   P+  L   DK ++ES+Y +KD VLE G
Sbjct:   96 LDRILRMLGASSILSVSTTKSGRVYGLNEESRC--LVASEDKVSVV---PML-LFTSDKAVVESFYNIKDVVLEEG 165          
The following BLAST results are available for this feature:
BLAST of CK739614 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 26
Match NameE-valueIdentityDescription
OMT2_CHRAE8.859e-2049.00Quercetin 3-O-methyltransferase 2 OS=Chrysospleniu... [more]
OMT1_CHRAE1.511e-1949.00Quercetin 3-O-methyltransferase 1 OS=Chrysospleniu... [more]
COMT1_MAIZE3.151e-1744.14Caffeic acid 3-O-methyltransferase OS=Zea mays PE=... [more]
COMT1_SACOF2.667e-1645.05Caffeic acid 3-O-methyltransferase OS=Saccharum of... [more]
OMT1_ORYSJ5.942e-1643.52Quercetin 3-O-methyltransferase 1 OS=Oryza sativa ... [more]
SMT_COPJA2.518e-1246.00(S)-scoulerine 9-O-methyltransferase OS=Coptis jap... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_6001 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE57F04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK739614 ID=CK739614; Name=CK739614; organism=Citrus sinensis; type=EST; length=385bp
GTGCTTGATCGTATATTGCGCCTTCTGGCGAGCTATTCAGTCCTTAATTG
CTCTTTGCGCAAATCTCCCCGACGGCAAAGTTGAGAGGCTTTATGGCCTT
GCCCCCGTTTGTAAATTCCCTCACTAAAAATGAAGATGGTGTTACACTTT
CCGATCTTTTGTCTCATGAACCAAGACAAGGTTCTCATGGAGAGCTGGTA
CTACTTAAAAGATGCAGTGCTTGAAGGTGGGCATTCCATTTAACAAGGCC
TATGGGATGAATGCATTCGATTACCATGGCAAAGATCTAAGATTCAACAA
GATTTTCAACAATGGAATGTCTTCTCATTCTACCATTACCATGAAGAAAA
TTCTTGAAAATTACAAAGGGTTTGAAGGCCTCAAC
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