CK739617
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK739617 vs. ExPASy Swiss-Prot
Match: RS24_BOVIN (40S ribosomal protein S24 OS=Bos taurus GN=RPS24 PE=2 SV=2) HSP 1 Score: 78.9518 bits (193), Expect = 8.510e-15 Identity = 40/55 (72.73%), Postives = 45/55 (81.82%), Query Frame = 1 Query: 79 VTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYDVKDPNSIFVF 243 VTIRTRKFMTNRLL RKQ VIDVLHPG+A V K E++EKLA+MY P+ IFVF Sbjct: 5 VTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKT-TPDVIFVF 58
BLAST of CK739617 vs. ExPASy Swiss-Prot
Match: RS24_ORYLA (40S ribosomal protein S24 OS=Oryzias latipes GN=rps24 PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 1.452e-14 Identity = 38/55 (69.09%), Postives = 45/55 (81.82%), Query Frame = 1 Query: 79 VTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYDVKDPNSIFVF 243 VTIRTRKFMTNRLL RKQ V+DVLHPG+A V K E++EKLA+MY P+ +FVF Sbjct: 5 VTIRTRKFMTNRLLQRKQMVVDVLHPGKATVPKTEIREKLAKMYKT-TPDVVFVF 58
BLAST of CK739617 vs. ExPASy Swiss-Prot
Match: RS24_TAKRU (40S ribosomal protein S24 OS=Takifugu rubripes GN=rps24 PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 1.896e-14 Identity = 37/55 (67.27%), Postives = 45/55 (81.82%), Query Frame = 1 Query: 79 VTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYDVKDPNSIFVF 243 VT+RTRKFMTNRLL RKQ V+DVLHPG+A V K E++EKLA+MY P+ +FVF Sbjct: 5 VTVRTRKFMTNRLLQRKQMVVDVLHPGKATVPKTEIREKLAKMYKT-TPDVVFVF 58
BLAST of CK739617 vs. ExPASy Swiss-Prot
Match: RS24_RHIRA (40S ribosomal protein S24 OS=Rhizomucor racemosus GN=RPS24 PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 2.476e-14 Identity = 39/60 (65.00%), Postives = 47/60 (78.33%), Query Frame = 1 Query: 67 ADKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYDV-KDPNSIFVF 243 AD AVTIRTRKF+TNRLL RKQ V+DV+HPG ANVSK EL+ K+ +MY K+ S+F F Sbjct: 20 ADAAVTIRTRKFLTNRLLQRKQMVVDVIHPGLANVSKDELRSKIGKMYKADKEVVSVFGF 79
BLAST of CK739617 vs. ExPASy Swiss-Prot
Match: RS24_ICTPU (40S ribosomal protein S24 OS=Ictalurus punctatus GN=rps24 PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 2.476e-14 Identity = 37/56 (66.07%), Postives = 46/56 (82.14%), Query Frame = 1 Query: 76 AVTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYDVKDPNSIFVF 243 +VT+RTRKFMTNRLL RKQ V+DVLHPG+A V K E++EKLA+MY P+ +FVF Sbjct: 4 SVTLRTRKFMTNRLLQRKQMVLDVLHPGKATVPKTEIREKLAKMYKT-TPDVVFVF 58
BLAST of CK739617 vs. ExPASy Swiss-Prot
Match: RS24B_SCHPO (40S ribosomal protein S24-B OS=Schizosaccharomyces pombe GN=rps24b PE=2 SV=3) HSP 1 Score: 77.411 bits (189), Expect = 2.476e-14 Identity = 35/46 (76.09%), Postives = 43/46 (93.48%), Query Frame = 1 Query: 73 KAVTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARMY 210 +AVTIRTRKFMTNRLL RKQ V+D+LHPG+AN+SK E++EKLA+MY Sbjct: 3 EAVTIRTRKFMTNRLLQRKQMVVDILHPGKANLSKNEIREKLAQMY 48
BLAST of CK739617 vs. ExPASy Swiss-Prot
Match: RS24_MACFA (40S ribosomal protein S24 OS=Macaca fascicularis GN=RPS24 PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 5.516e-14 Identity = 39/55 (70.91%), Postives = 44/55 (80.00%), Query Frame = 1 Query: 79 VTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYDVKDPNSIFVF 243 VTIRTRKFMTNRLL RKQ VI VLHPG+A V K E++EKLA+MY P+ IFVF Sbjct: 5 VTIRTRKFMTNRLLQRKQMVIGVLHPGKATVPKTEIREKLAKMYKT-TPDVIFVF 58
BLAST of CK739617 vs. ExPASy Swiss-Prot
Match: RS24A_SCHPO (40S ribosomal protein S24-A OS=Schizosaccharomyces pombe GN=rps24a PE=2 SV=3) HSP 1 Score: 76.2554 bits (186), Expect = 5.516e-14 Identity = 34/46 (73.91%), Postives = 42/46 (91.30%), Query Frame = 1 Query: 73 KAVTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARMY 210 +AVTIRTRKFMTNRLL RKQ V+D+LHPG+AN+SK +L+EKL +MY Sbjct: 3 EAVTIRTRKFMTNRLLQRKQMVVDILHPGKANISKNDLREKLGQMY 48
BLAST of CK739617 vs. ExPASy Swiss-Prot
Match: RS24_YEAST (40S ribosomal protein S24 OS=Saccharomyces cerevisiae GN=RPS24A PE=1 SV=3) HSP 1 Score: 74.3294 bits (181), Expect = 2.096e-13 Identity = 39/57 (68.42%), Postives = 46/57 (80.70%), Query Frame = 1 Query: 76 AVTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYDV-KDPNSIFVF 243 AVTIRTRK ++N LL+RKQFV+DVLHP RANVSK EL+EKLA +Y KD S+F F Sbjct: 4 AVTIRTRKVISNPLLARKQFVVDVLHPNRANVSKDELREKLAEVYKAEKDAVSVFGF 60 The following BLAST results are available for this feature:
BLAST of CK739617 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 19
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Sequences
The
following sequences are available for this feature:
EST sequence >CK739617 ID=CK739617; Name=CK739617; organism=Citrus sinensis; type=EST; length=245bpback to top |