CK739620
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK739620 vs. ExPASy Swiss-Prot
Match: CB2A_PYRPY (Chlorophyll a-b binding protein 1A, chloroplastic OS=Pyrus pyrifolia PE=2 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 2.723e-24 Identity = 73/165 (44.24%), Postives = 92/165 (55.76%), Query Frame = 3 Query: 39 MATSAI-QQSAFAGQ--TALRQSNEFVRKVGVADG-GRITMRRTV--KSAPQSI---WYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTRWFISRPRDIC*EP*ARGDPQQMGNAWSSWLRL-------P*ILSKNGVKFGEAVWFKAGAQYSLKVALTILATP 485 MA+ I + AFAG ++++ N + VG A G R+TMR+ KS SI WYGPDR YLGPFS + PSYLTGEFPGDYGWDT + P +++ S W L P +L++NGVKFGEAVWFKAGAQ + L L +P Sbjct: 5 MASCGIGSRCAFAGAQLSSVKPQNNQLLGVGGAHGEARLTMRKATGRKSVAASIDSPWYGPDRVMYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETF-------AKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGSP 162
BLAST of CK739620 vs. ExPASy Swiss-Prot
Match: CB23_SOYBN (Chlorophyll a-b binding protein 3, chloroplastic OS=Glycine max GN=CAB3 PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 2.723e-24 Identity = 61/127 (48.03%), Postives = 75/127 (59.06%), Query Frame = 3 Query: 135 GRITMRRTVKS--APQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTRWFISRPRDIC*EP*ARGDPQQMGNAWSSWLRL-------P*ILSKNGVKFGEAVWFKAGAQYSLKVALTILATPT 488 GR++MR+TV + S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDT + P +++ S W L P +LS+NGVKFGEAVWFKAG+Q + L L P+ Sbjct: 29 GRVSMRKTVTKQVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETF-------AKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPS 148
BLAST of CK739620 vs. ExPASy Swiss-Prot
Match: CB2A_PINSY (Chlorophyll a-b binding protein type 2 member 1A, chloroplastic OS=Pinus sylvestris PE=2 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 3.556e-24 Identity = 73/165 (44.24%), Postives = 92/165 (55.76%), Query Frame = 3 Query: 39 MATSAI-QQSAFAGQ--TALRQSNEFVRKVGVADG-GRITMRRTV--KSAPQSI---WYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTRWFISRPRDIC*EP*ARGDPQQMGNAWSSWLRL-------P*ILSKNGVKFGEAVWFKAGAQYSLKVALTILATP 485 MA+ I + AFAG ++++ N + VG A G R+TMR+ KS SI WYGPDR YLGPFS + PSYLTGEFPGDYGWDT + P +++ S W L P +L++NGVKFGEAVWFKAGAQ + L L +P Sbjct: 5 MASCGIGSRCAFAGAQLSSVKPQNNQLLGVGGAHGEARLTMRKATGKKSVAASIDSPWYGPDRVLYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETF-------AKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGSP 162
BLAST of CK739620 vs. ExPASy Swiss-Prot
Match: CB28_PEA (Chlorophyll a-b binding protein 8, chloroplastic OS=Pisum sativum GN=CAB8 PE=1 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 3.556e-24 Identity = 64/160 (40.00%), Postives = 87/160 (54.37%), Query Frame = 3 Query: 42 ATSAIQQSAFAGQTALRQSNEFVRKVGVADGGRITMRRTVKS----APQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTRWFISRPRDIC*EP*ARGDPQQMGNAWSSWLRL-------P*ILSKNGVKFGEAVWFKAGAQYSLKVALTILATPT 488 ++ A+ G+ +N +++G G R TMR++ + + S WYGPDR KYLGPFS ++PSYLTGEFPGDYGWDT + P +++ S W L P +LS+NGVKFGEAVWFKAG+Q + L L P+ Sbjct: 4 SSMALSSPTLTGKPVETSANPSSQELG---GARFTMRKSATTKKVASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETF-------SKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPS 153
BLAST of CK739620 vs. ExPASy Swiss-Prot
Match: CB23_NICPL (Chlorophyll a-b binding protein C, chloroplastic OS=Nicotiana plumbaginifolia GN=CABC PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 3.556e-24 Identity = 66/160 (41.25%), Postives = 88/160 (55.00%), Query Frame = 3 Query: 42 ATSAIQQSAFAGQTALRQSNEFVRKVGVADGGRITMRRTVKSAP----QSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTRWFISRPRDIC*EP*ARGDPQQMGNAWSSWLRL-------P*ILSKNGVKFGEAVWFKAGAQYSLKVALTILATPT 488 +T A+ S+FAG+ A++ S G G++TMR+T A S WYGP+R KYLGPFS ++PSYLTGEFPGDYGWDT + P +++ W L P +L++NGVKFGEAVWFK G+Q + L L P+ Sbjct: 4 STMALSSSSFAGK-AVKLSPSSSEITG---NGKVTMRKTASKAKPVSSSSPWYGPNRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETF-------AKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKGGSQIFSQGGLDYLGNPS 152
BLAST of CK739620 vs. ExPASy Swiss-Prot
Match: CB25_NICPL (Chlorophyll a-b binding protein E, chloroplastic OS=Nicotiana plumbaginifolia GN=CABE PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 4.644e-24 Identity = 67/160 (41.88%), Postives = 87/160 (54.37%), Query Frame = 3 Query: 42 ATSAIQQSAFAGQTALRQSNEFVRKVGVADGGRITMRRTVKSAPQ----SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTRWFISRPRDIC*EP*ARGDPQQMGNAWSSWLRL-------P*ILSKNGVKFGEAVWFKAGAQYSLKVALTILATPT 488 A++ S FAG+ A++ S G G++TMR+T A S WYGPDR KYLGPFS ++PSYLTGEFPGDYGWDT + P +++ W L P +L++NGVKFGEAVWFKAG+Q + L L P+ Sbjct: 3 ASTTALSSPFAGK-AVKLSPSSSEVTG---NGKVTMRKTANKAKPVSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETF-------AKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPS 151
BLAST of CK739620 vs. ExPASy Swiss-Prot
Match: CB21_TOBAC (Chlorophyll a-b binding protein 16, chloroplastic OS=Nicotiana tabacum GN=CAB16 PE=2 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 4.644e-24 Identity = 67/160 (41.88%), Postives = 87/160 (54.37%), Query Frame = 3 Query: 42 ATSAIQQSAFAGQTALRQSNEFVRKVGVADGGRITMRRTVKSAPQ----SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTRWFISRPRDIC*EP*ARGDPQQMGNAWSSWLRL-------P*ILSKNGVKFGEAVWFKAGAQYSLKVALTILATPT 488 A++ S FAG+ A++ S G G++TMR+T A S WYGPDR KYLGPFS ++PSYLTGEFPGDYGWDT + P +++ W L P +L++NGVKFGEAVWFKAG+Q + L L P+ Sbjct: 3 ASTTALSSPFAGK-AVKLSPSSSEVTG---NGKVTMRKTASKAKPVSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETF-------AKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPS 151
BLAST of CK739620 vs. ExPASy Swiss-Prot
Match: CB2B_PINSY (Chlorophyll a-b binding protein type 2 member 1B, chloroplastic OS=Pinus sylvestris PE=2 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 6.065e-24 Identity = 69/166 (41.57%), Postives = 85/166 (51.20%), Query Frame = 3 Query: 39 MATSAIQQSAFAGQTALRQSNEFVRKVGVADG----GRITMRRTVK-----SAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTRWFISRPRDIC*EP*ARGDPQQMGNAWSSWLRL-------P*ILSKNGVKFGEAVWFKAGAQYSLKVALTILATPT 488 MA+ I AFAG + +GV G R+TMR+ SA S WYGPDR YLGPFS + PSYLTGEFPGDYGWDT + P + +++ W L P +L++NGVKFGEAVWFKAGAQ + L L P+ Sbjct: 1 MASCGIGSCAFAGGQISSLKPHTNQLLGVGAGVHGEARVTMRKATTKKLTASASTSPWYGPDRVLYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPENF-------AKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPS 159
BLAST of CK739620 vs. ExPASy Swiss-Prot
Match: CB2A_SPIOL (Chlorophyll a-b binding protein, chloroplastic OS=Spinacia oleracea PE=1 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 1.765e-23 Identity = 60/130 (46.15%), Postives = 76/130 (58.46%), Query Frame = 3 Query: 135 GRITMRRTVKSAPQSI-----WYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTRWFISRPRDIC*EP*ARGDPQQMGNAWSSWLRL-------P*ILSKNGVKFGEAVWFKAGAQYSLKVALTILATPT 488 GRITMR+T P+++ WYGPDR KYLGPFS ++PSYLTGEFPGDYGWDT + P +++ W L P +L++NGVKFGEAVWFKAG+Q + L L P+ Sbjct: 31 GRITMRKTA-GKPKTVQSSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETF-------AKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPS 152
BLAST of CK739620 vs. ExPASy Swiss-Prot
Match: CB27_TOBAC (Chlorophyll a-b binding protein 7, chloroplastic OS=Nicotiana tabacum GN=CAB7 PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 1.765e-23 Identity = 67/160 (41.88%), Postives = 85/160 (53.12%), Query Frame = 3 Query: 42 ATSAIQQSAFAGQTALRQSNEFVRKVGVADGGRITMRRTVKSAPQ----SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTRWFISRPRDIC*EP*ARGDPQQMGNAWSSWLRL-------P*ILSKNGVKFGEAVWFKAGAQYSLKVALTILATPT 488 +T A+ +FAG A++ S G G+ MR+TV A S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDT + P +++ W L P +L++NGVKFGEAVWFKAG+Q + L L P+ Sbjct: 4 STMALSSPSFAGN-AVKLSPSSSEITG---NGKAIMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETF-------AKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPS 152 The following BLAST results are available for this feature:
BLAST of CK739620 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 58
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Sequences
The
following sequences are available for this feature:
EST sequence >CK739620 ID=CK739620; Name=CK739620; organism=Citrus sinensis; type=EST; length=520bpback to top |