CK739633
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK739633 vs. ExPASy Swiss-Prot
Match: UBC13_ARATH (Ubiquitin-conjugating enzyme E2 13 OS=Arabidopsis thaliana GN=UBC13 PE=2 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 1.792e-18 Identity = 49/149 (32.89%), Postives = 77/149 (51.68%), Query Frame = 3 Query: 39 NSNLPRRIIKETQRLLSEPAPGISAS-PSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDIL-------------KDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEGE 443 NS + K+ + L P G SA E N+ ++V I+GP + YEGG F + P+ YP + P VRF + I+HPN+ GR+C+ IL ++W+P + +++LSI ++LS PN + P + AK W+ E Sbjct: 2 NSQACLLLQKQLKDLCKHPVDGFSAGLVDEKNIFEWSVTIIGPPDTLYEGGFFYAIMSFPQNYPNSPPTVRFTSDIWHPNVYPDGRVCISILHPPGDDPSGYELASERWTPVHTVESIMLSIISMLSGPNDESPANVEAAKEWREKRDE 150
BLAST of CK739633 vs. ExPASy Swiss-Prot
Match: UBC7_ARATH (Ubiquitin-conjugating enzyme E2 7 OS=Arabidopsis thaliana GN=UBC7 PE=2 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 2.341e-18 Identity = 46/140 (32.86%), Postives = 74/140 (52.86%), Query Frame = 3 Query: 66 KETQRLLSEPAPGISAS-PSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDIL-------------KDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEGE 443 K+ + L P G SA E N+ ++V I+GP + YEGG F + P+ YP + P VRF + ++HPN+ GR+C+ IL ++W+P + +++LSI ++LS PN + P + AK W+ E Sbjct: 11 KQLKDLCKHPVDGFSAGLVDEKNIFEWSVTIIGPPDTLYEGGFFNAIMTFPQNYPNSPPTVRFTSDMWHPNVYSDGRVCISILHPPGDDPSGYELASERWTPVHTVESIMLSIISMLSGPNDESPANVEAAKEWRDKRDE 150
BLAST of CK739633 vs. ExPASy Swiss-Prot
Match: UB2R1_MOUSE (Ubiquitin-conjugating enzyme E2 R1 OS=Mus musculus GN=Cdc34 PE=1 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 2.341e-18 Identity = 50/150 (33.33%), Postives = 81/150 (54.00%), Query Frame = 3 Query: 54 RRIIKETQRLLSEPAPGISASPSEDNMRY-FNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDIL-------------KDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIA---KHWKTNEGEAGE 452 + ++ E + L EP G + ++ Y + V I GP + YEGG FK L P +YP + P RFLTK++HPNI + G +C+ IL ++W+P +RT+LLS+ +LL+ PN P + + + + WK ++G+ E Sbjct: 11 KALLLELKGLQEEPVEGFRVTLVDEGDLYNWEVAIFGPPNTYYEGGYFKARLKFPIDYPYSPPAFRFLTKMWHPNIYETGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSVISLLNEPNTFSPANVDASVMYRKWKESKGKDRE 160
BLAST of CK739633 vs. ExPASy Swiss-Prot
Match: UB2R1_HUMAN (Ubiquitin-conjugating enzyme E2 R1 OS=Homo sapiens GN=CDC34 PE=1 SV=2) HSP 1 Score: 92.0485 bits (227), Expect = 2.341e-18 Identity = 50/150 (33.33%), Postives = 81/150 (54.00%), Query Frame = 3 Query: 54 RRIIKETQRLLSEPAPGISASPSEDNMRY-FNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDIL-------------KDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIA---KHWKTNEGEAGE 452 + ++ E + L EP G + ++ Y + V I GP + YEGG FK L P +YP + P RFLTK++HPNI + G +C+ IL ++W+P +RT+LLS+ +LL+ PN P + + + + WK ++G+ E Sbjct: 11 KALLLELKGLQEEPVEGFRVTLVDEGDLYNWEVAIFGPPNTYYEGGYFKARLKFPIDYPYSPPAFRFLTKMWHPNIYETGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSVISLLNEPNTFSPANVDASVMYRKWKESKGKDRE 160
BLAST of CK739633 vs. ExPASy Swiss-Prot
Match: UBC12_CANGA (NEDD8-conjugating enzyme UBC12 OS=Candida glabrata GN=UBC12 PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 3.057e-18 Identity = 55/164 (33.54%), Postives = 87/164 (53.05%), Query Frame = 3 Query: 6 KNKKKSILEMANSNLPR--RIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEGEAGETAKEWTRLYASGA 491 KN S+ NS P R+ K+ + L P ++ +++ +I+ P + Y+GG F+ E YP+ PKV KI+HPNID G+ICL+IL++ WSPAL ++ ++L + +L PN +DPL++ A+ ++ E G RL SGA Sbjct: 17 KNAGSSVKANTNSTSPAKLRLQKDIEELELPPTVRVNIISLDNHKEMSLNIIIIPDEGFYKGGKFRFTATFLETYPIDPPKVICNNKIFHPNIDPHGKICLNILREDWSPALDLQCIVLGLLSLFQEPNGNDPLNKEAAEVLNKDKLEFGNL----VRLAMSGA 176
BLAST of CK739633 vs. ExPASy Swiss-Prot
Match: UBC8_SCHPO (Ubiquitin-conjugating enzyme E2 8 OS=Schizosaccharomyces pombe GN=ubc8 PE=2 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 3.993e-18 Identity = 46/123 (37.40%), Postives = 71/123 (57.72%), Query Frame = 3 Query: 54 RRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKL-GRICLDILKDKWSPALQIRTVL-LSIQALLSAPNPDDPLSENIA 416 RRI + +LL + DNM+ F V GP+++PY GG++K+ + LP EYP +P + F+ +I+HPNID+L G +CLD++ WSP + + + + LL PN DPL+ A Sbjct: 6 RRIETDVMKLLMSD---YEVTLVNDNMQEFYVRFHGPSETPYSGGIWKVHVELPSEYPWKSPSIGFVNRIFHPNIDELSGSVCLDVINQTWSPMFDMINIFEVFLPQLLRYPNASDPLNGEAA 125
BLAST of CK739633 vs. ExPASy Swiss-Prot
Match: UBC1_MIMIV (Probable ubiquitin-conjugating enzyme E2 L460 OS=Acanthamoeba polyphaga mimivirus GN=UBC PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 3.993e-18 Identity = 50/152 (32.89%), Postives = 89/152 (58.55%), Query Frame = 3 Query: 39 NSNLPRRIIKETQRLLSEP---APGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDIL-KDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEGEAGETAKEWTRLYA 482 NS+ RRI E ++ ++ A + ++N+ + V I GP S YE F+LE+ L +YP ++PKV+F+T I H N++ G ICL+IL KD W+ +L I +++ SI LL PNP+DP + +A ++ ++ + +++ + ++ Sbjct: 2 NSSNIRRIQNEYNKINNDKNLYADSFQINMVDENIFLWKVNIKGPENSLYENYNFELEIELSNDYPYSSPKVKFITPIQHMNVNDKGDICLNILKKDGWNASLNIISIIWSIIVLLDQPNPEDPFNSELASLYRNDKLSYDKKIRDYCKTHS 153
BLAST of CK739633 vs. ExPASy Swiss-Prot
Match: UBC16_SCHPO (Ubiquitin-conjugating enzyme E2 16 OS=Schizosaccharomyces pombe GN=ubc16 PE=2 SV=2) HSP 1 Score: 91.2781 bits (225), Expect = 3.993e-18 Identity = 50/122 (40.98%), Postives = 75/122 (61.48%), Query Frame = 3 Query: 129 NMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNID-KLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEGEA-GETAKEWTRLYASG 488 +M ++ +I GPT++PYEGG + L++ + E YP++ P V F TKI HPNI G +C+DILK WSPA +++ L+I +LLS + PL+ + AK +T + A + T LYA G Sbjct: 33 DMFHWKAVIEGPTETPYEGGQWVLDIHVHEGYPISPPSVYFQTKIVHPNISWTNGEVCMDILKTHWSPAWSLQSACLAIISLLSNYDASSPLNVDAAKLLRTGDKTAYNSLVRCTTYLYAKG 154
BLAST of CK739633 vs. ExPASy Swiss-Prot
Match: UBE2H_MOUSE (Ubiquitin-conjugating enzyme E2 H OS=Mus musculus GN=Ube2h PE=2 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 6.811e-18 Identity = 44/117 (37.61%), Postives = 70/117 (59.83%), Query Frame = 3 Query: 141 FNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKL-GRICLDILKDKWSPALQIRTVLLS-IQALLSAPNPDDPLSENIAKHWKTNEGEAGETAKEWTRLYAS 485 F V GP +PYEGGV+K+ + LP++YP +P + F+ KI+HPNID+ G +CLD++ W+ + + S + LL+ PNP DPL+ + A + E + KE+ + YA+ Sbjct: 34 FVVKFYGPQGTPYEGGVWKVRVDLPDKYPFKSPSIGFMNKIFHPNIDEASGTVCLDVINQTWTALYDLTNIFESFLPQLLAYPNPIDPLNGDAAAMYLHRPEEYKQKIKEYIQKYAT 150
BLAST of CK739633 vs. ExPASy Swiss-Prot
Match: UBE2H_HUMAN (Ubiquitin-conjugating enzyme E2 H OS=Homo sapiens GN=UBE2H PE=1 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 6.811e-18 Identity = 44/117 (37.61%), Postives = 70/117 (59.83%), Query Frame = 3 Query: 141 FNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKL-GRICLDILKDKWSPALQIRTVLLS-IQALLSAPNPDDPLSENIAKHWKTNEGEAGETAKEWTRLYAS 485 F V GP +PYEGGV+K+ + LP++YP +P + F+ KI+HPNID+ G +CLD++ W+ + + S + LL+ PNP DPL+ + A + E + KE+ + YA+ Sbjct: 34 FVVKFYGPQGTPYEGGVWKVRVDLPDKYPFKSPSIGFMNKIFHPNIDEASGTVCLDVINQTWTALYDLTNIFESFLPQLLAYPNPIDPLNGDAAAMYLHRPEEYKQKIKEYIQKYAT 150 The following BLAST results are available for this feature:
BLAST of CK739633 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 250
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Sequences
The
following sequences are available for this feature:
EST sequence >CK739633 ID=CK739633; Name=CK739633; organism=Citrus sinensis; type=EST; length=596bpback to top |