CK739655

Overview
NameCK739655
Unique NameCK739655
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length436
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK739655 vs. ExPASy Swiss-Prot
Match: G3P1_JACOR (Glyceraldehyde-3-phosphate dehydrogenase, muscle OS=Jaculus orientalis PE=1 SV=2)

HSP 1 Score: 100.908 bits (250), Expect = 2.206e-30
Identity = 53/111 (47.75%), Postives = 69/111 (62.16%), Query Frame = 2
Query:  104 PLSQPDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNENEYKPEL 436
            P    +YM YMFKYDS HG++K   +K ++ K ++ G   +T+F  R+P +I W + GAEYVVESTGVFT               VIISAPS+DAPMFV+GVN  +Y   L
Sbjct:   64 PFIDLNYMVYMFKYDSTHGKFKG-TVKAENGKLVINGHA-ITIFQERDPSKIKWGDAGAEYVVESTGVFTTMEKAGAHLKGGAKRVIISAPSRDAPMFVMGVNHEKYDKSL 172          

HSP 2 Score: 51.6026 bits (122), Expect = 2.206e-30
Identity = 22/35 (62.86%), Postives = 27/35 (77.14%), Query Frame = 1
Query:    7 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFI 111
            VK+G+NGFGRIGRLV R       V++VA+NDPFI
Sbjct:    2 VKVGVNGFGRIGRLVTRAAFNSGKVDIVAINDPFI 36          
BLAST of CK739655 vs. ExPASy Swiss-Prot
Match: G3P_CRIGR (Glyceraldehyde-3-phosphate dehydrogenase OS=Cricetulus griseus GN=GAPDH PE=2 SV=2)

HSP 1 Score: 100.138 bits (248), Expect = 2.876e-30
Identity = 53/111 (47.75%), Postives = 70/111 (63.06%), Query Frame = 2
Query:  104 PLSQPDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNENEYKPEL 436
            P    +YM YMF+YDS HG++K   +K ++ K ++ G K +T+F  R+P  I W + GAEYVVESTGVFT               VIISAPS DAPMFV+GVN+++Y   L
Sbjct:   34 PFIDLNYMVYMFQYDSTHGKFKG-TVKAENGKLVING-KAITIFQERDPANIKWGDAGAEYVVESTGVFTTMEKAGAHLKGGAKRVIISAPSADAPMFVMGVNQDKYDNSL 142          

HSP 2 Score: 51.9878 bits (123), Expect = 2.876e-30
Identity = 23/35 (65.71%), Postives = 27/35 (77.14%), Query Frame = 1
Query:    7 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFI 111
            VK+G+NGFGRIGRLV R       VE+VA+NDPFI
Sbjct:    2 VKVGVNGFGRIGRLVTRAAFTSGKVEVVAINDPFI 36          
BLAST of CK739655 vs. ExPASy Swiss-Prot
Match: G3P1_TRIKO (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Trichoderma koningii GN=gpd1 PE=1 SV=3)

HSP 1 Score: 102.064 bits (253), Expect = 3.745e-30
Identity = 53/107 (49.53%), Postives = 68/107 (63.55%), Query Frame = 2
Query:  104 PLSQPDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNENEY 424
            P  +P Y  YMFKYDS HG++K  ++KV D K L+   K +  +  R+P  IPW ++GAEY+VESTGVFT               VIISAPS DAPM+V+GVNE+ Y
Sbjct:   35 PFIEPHYAEYMFKYDSTHGRFKG-DIKV-DGKDLVIDGKRIKFYQERDPANIPWKDSGAEYIVESTGVFTTTEKASAHFKGGAKKVIISAPSADAPMYVMGVNEDTY 139          

HSP 2 Score: 49.6766 bits (117), Expect = 3.745e-30
Identity = 23/34 (67.65%), Postives = 28/34 (82.35%), Query Frame = 1
Query:   10 KIGINGFGRIGRLVARVILQRDDVELVAVNDPFI 111
            K+GINGFGRIGR+V R  L+   VE+VA+NDPFI
Sbjct:    4 KVGINGFGRIGRVVLRNALETGAVEVVALNDPFI 37          
BLAST of CK739655 vs. ExPASy Swiss-Prot
Match: G3P_CRYPA (Glyceraldehyde-3-phosphate dehydrogenase OS=Cryphonectria parasitica PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 3.745e-30
Identity = 52/107 (48.60%), Postives = 62/107 (57.94%), Query Frame = 2
Query:  104 PLSQPDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNENEY 424
            P  +P Y  YM KYDS HG +K        D  L+ G K V  +  R+P  IPW+ETGA+Y+VESTGVFT               VIISAPS DAPM+V+GVNE  Y
Sbjct:   35 PFIEPHYAAYMLKYDSQHGNFKGDVTVEGSD--LVVGGKKVRFYTERDPAAIPWSETGADYIVESTGVFTTTEKAKAHLKGGAKKVIISAPSADAPMYVMGVNEKTY 139          

HSP 2 Score: 53.9138 bits (128), Expect = 3.745e-30
Identity = 25/35 (71.43%), Postives = 29/35 (82.86%), Query Frame = 1
Query:    7 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFI 111
            VK+GINGFGRIGR+V R   +  DVE+VAVNDPFI
Sbjct:    3 VKVGINGFGRIGRIVFRNAHEHSDVEIVAVNDPFI 37          
BLAST of CK739655 vs. ExPASy Swiss-Prot
Match: G3P_PANVR (Glyceraldehyde-3-phosphate dehydrogenase OS=Panulirus versicolor PE=1 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 3.745e-30
Identity = 55/111 (49.55%), Postives = 69/111 (62.16%), Query Frame = 2
Query:  104 PLSQPDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNENEYKPEL 436
            P    +YM YMFKYDS HG +K  E+K +D   ++ G+K +TVF    PE IPW++ GAEY+VESTGVFT               VIISAPS DAPMFV GVN  +Y  ++
Sbjct:   32 PFIALEYMVYMFKYDSTHGMFKG-EVKAEDGALVVDGKK-ITVFNEMKPENIPWSKAGAEYIVESTGVFTTIEKASAHFKGGAKKVIISAPSADAPMFVCGVNLEKYSKDM 140          

HSP 2 Score: 46.9802 bits (110), Expect = 3.745e-30
Identity = 24/34 (70.59%), Postives = 27/34 (79.41%), Query Frame = 1
Query:   10 KIGINGFGRIGRLVARVILQRDDVELVAVNDPFI 111
            KIGINGFGRIGRLV R  L+    ++VAVNDPFI
Sbjct:    2 KIGINGFGRIGRLVLRAALEM-GAQVVAVNDPFI 34          
BLAST of CK739655 vs. ExPASy Swiss-Prot
Match: G3P_PICCI (Glyceraldehyde-3-phosphate dehydrogenase OS=Pichia ciferrii GN=GPD PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 3.745e-30
Identity = 47/111 (42.34%), Postives = 69/111 (62.16%), Query Frame = 2
Query:  104 PLSQPDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNENEYKPEL 436
            P   P+Y +YMFKYDS HG++   E+  + +  ++ G+K + V+  R+P  IPW + G +YV++STGVF                V+I+APS  APMFVVGVNE++Y P+L
Sbjct:   35 PFIAPEYASYMFKYDSTHGRYSG-EVSHEGENIVIDGKK-IRVYQERDPVNIPWGKDGVDYVIDSTGVFKELDSAQKHIDAGAKKVVITAPSSTAPMFVVGVNEDKYTPDL 143          

HSP 2 Score: 56.225 bits (134), Expect = 3.745e-30
Identity = 23/35 (65.71%), Postives = 30/35 (85.71%), Query Frame = 1
Query:    7 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFI 111
            + +GINGFGRIGRLV R+ L R D+++VA+NDPFI
Sbjct:    3 ITVGINGFGRIGRLVLRIALSRKDIQIVAINDPFI 37          
BLAST of CK739655 vs. ExPASy Swiss-Prot
Match: G3P_COCP7 (Glyceraldehyde-3-phosphate dehydrogenase OS=Coccidioides posadasii (strain C735) GN=GPD PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 4.876e-30
Identity = 52/111 (46.85%), Postives = 67/111 (60.36%), Query Frame = 2
Query:  104 PLSQPDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNENEYKPEL 436
            P  +  Y  YM KYDS HG++K  ++K  ++   + G K V  +  R+P  IPWAETGA+YV+ESTGVFT               VIISAPS DAPMFV+GVN   YK ++
Sbjct:   35 PFIETHYAAYMLKYDSTHGRFKG-DVKFSENGLDVDG-KHVRFYQERDPANIPWAETGADYVIESTGVFTTTEKASAHLKGGAKKVIISAPSADAPMFVMGVNNETYKSDI 143          

HSP 2 Score: 55.0694 bits (131), Expect = 4.876e-30
Identity = 25/37 (67.57%), Postives = 31/37 (83.78%), Query Frame = 1
Query:    7 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITT 117
            VK+GINGFGRIGR+V R  ++  +VE+VAVNDPFI T
Sbjct:    3 VKVGINGFGRIGRIVFRNAVEHPEVEIVAVNDPFIET 39          
BLAST of CK739655 vs. ExPASy Swiss-Prot
Match: G3P_PLESA (Glyceraldehyde-3-phosphate dehydrogenase OS=Pleurotus sajor-caju GN=GPD PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 4.877e-30
Identity = 55/110 (50.00%), Postives = 68/110 (61.82%), Query Frame = 2
Query:  104 PLSQPDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNENEYKPE 433
            P    DYM YMFKYDSVHG++K   ++ KD K ++ G KP+ +F  ++P  IPW   GA+YVVESTGVFT               V+ISAPS DAPMFV GVN   Y P+
Sbjct:   34 PFIDLDYMVYMFKYDSVHGRFKG-SIEAKDGKLIVEG-KPIHIFAEKDPANIPWGSVGADYVVESTGVFT-TIDKASAHLKGGEKVVISAPSADAPMFVCGVNLETYDPK 140          

HSP 2 Score: 48.521 bits (114), Expect = 4.877e-30
Identity = 22/35 (62.86%), Postives = 28/35 (80.00%), Query Frame = 1
Query:    7 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFI 111
            V +GINGFGRIGR+V R  L+   V++VA+NDPFI
Sbjct:    2 VNVGINGFGRIGRIVFRNALEVGGVDVVAINDPFI 36          
BLAST of CK739655 vs. ExPASy Swiss-Prot
Match: G3P_BRUMA (Glyceraldehyde-3-phosphate dehydrogenase OS=Brugia malayi GN=G3PD PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 8.266e-30
Identity = 52/110 (47.27%), Postives = 64/110 (58.18%), Query Frame = 2
Query:  104 PLSQPDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKP---VTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNENEY 424
            P    DYM YMFKYDS HG++K   +  +  K ++   K    ++V   ++P EIPW   GAEYVVESTGVFT               VIISAPS DAPMFV+GVN + Y
Sbjct:   36 PFINIDYMVYMFKYDSTHGRFKG-SVSAEGGKLIVTNGKTTHHISVHNSKDPAEIPWGVDGAEYVVESTGVFTTTDKASAHLKGGAKKVIISAPSADAPMFVMGVNNDMY 144          

HSP 2 Score: 56.225 bits (134), Expect = 8.266e-30
Identity = 25/36 (69.44%), Postives = 31/36 (86.11%), Query Frame = 1
Query:    4 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFI 111
            K K+GINGFGRIGRLV R  +++D V++VAVNDPFI
Sbjct:    3 KPKVGINGFGRIGRLVLRAAVEKDTVDVVAVNDPFI 38          
BLAST of CK739655 vs. ExPASy Swiss-Prot
Match: G3P_SCLSC (Glyceraldehyde-3-phosphate dehydrogenase OS=Sclerotinia sclerotiorum GN=GPD PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 8.267e-30
Identity = 52/110 (47.27%), Postives = 65/110 (59.09%), Query Frame = 2
Query:  104 PLSQPDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNENEYKPE 433
            P  + +Y  YM KYDS HGQ+K  ++KV  D   + G+K V  +  R+P  IPWAE+ A YVVESTGVFT               V+ISAPS DAPM+V+GVN   Y  E
Sbjct:   36 PFIETEYAAYMLKYDSTHGQFKG-DIKVLSDGLEVNGKK-VKFYTERDPANIPWAESEAYYVVESTGVFTTTEKAKAHLKGGAKKVVISAPSADAPMYVMGVNNETYNGE 143          

HSP 2 Score: 56.6102 bits (135), Expect = 8.267e-30
Identity = 24/36 (66.67%), Postives = 31/36 (86.11%), Query Frame = 1
Query:   10 KIGINGFGRIGRLVARVILQRDDVELVAVNDPFITT 117
            K+GINGFGRIGR+V R  ++ DD+++VAVNDPFI T
Sbjct:    5 KVGINGFGRIGRIVFRNAIEHDDIDIVAVNDPFIET 40          
The following BLAST results are available for this feature:
BLAST of CK739655 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 238
Match NameE-valueIdentityDescription
G3P1_JACOR2.206e-3047.75Glyceraldehyde-3-phosphate dehydrogenase, muscle O... [more]
G3P_CRIGR2.876e-3047.75Glyceraldehyde-3-phosphate dehydrogenase OS=Cricet... [more]
G3P1_TRIKO3.745e-3049.53Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Tric... [more]
G3P_CRYPA3.745e-3048.60Glyceraldehyde-3-phosphate dehydrogenase OS=Crypho... [more]
G3P_PANVR3.745e-3049.55Glyceraldehyde-3-phosphate dehydrogenase OS=Panuli... [more]
G3P_PICCI3.745e-3042.34Glyceraldehyde-3-phosphate dehydrogenase OS=Pichia... [more]
G3P_COCP74.876e-3046.85Glyceraldehyde-3-phosphate dehydrogenase OS=Coccid... [more]
G3P_PLESA4.877e-3050.00Glyceraldehyde-3-phosphate dehydrogenase OS=Pleuro... [more]
G3P_BRUMA8.266e-3047.27Glyceraldehyde-3-phosphate dehydrogenase OS=Brugia... [more]
G3P_SCLSC8.267e-3047.27Glyceraldehyde-3-phosphate dehydrogenase OS=Sclero... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_6042 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE58B01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK739655 ID=CK739655; Name=CK739655; organism=Citrus sinensis; type=EST; length=436bp
GGGAAGGTCAAGATCGGAATCAACGGATTCGGAAGAATTGGTAGGCTGGT
GGCAAGAGTCATCTTGCAGAGGGACGATGTTGAACTCGTTGCTGTTAATG
ATCCCTTTATCACAACCCGATTACATGACATACATGTTTAAGTACGACAG
TGTTCACGGTCAATGGAAGCACCATGAATTGAAGGTTAAGGACGATAAGA
CCCTTCTCTTTGGTGAGAAGCCTGTCACTGTTTTCGGTGTTAGGAACCCA
GAGGAGATCCCATGGGCTGAGACTGGAGCCGAGTATGTTGTGGAGTCGAC
TGGAGTCTTTACTGACAAGGATAAGGCTGCTGCCCATTTGAAGGGTGGTG
CTAAGAAAGTTATCATCTCAGCCCCCAGCAAGGATGCTCCTATGTTTGTT
GTCGGTGTCAATGAAAACGAGTACAAACCAGAGCTC
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