CK739662

Overview
NameCK739662
Unique NameCK739662
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length250
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK739662 vs. ExPASy Swiss-Prot
Match: ERD6_ARATH (Sugar transporter ERD6 OS=Arabidopsis thaliana GN=ERD6 PE=1 SV=3)

HSP 1 Score: 72.7886 bits (177), Expect = 6.058e-13
Identity = 36/83 (43.37%), Postives = 51/83 (61.45%), Query Frame = 2
Query:    2 DADITHEAAEIQDYIETLERLPKAGMLDLFQRRYLRSVTIGVGLMVFQQFGGINGICFYTSTIFESAGFSSSVGTIIYAILQV 250
            D DI+ EA  I+D I+  E   +  M +LFQRRY   + IGVGLM  QQ  G +G+ +Y S++F   GF S++GT + A + V
Sbjct:  257 DVDISREANTIRDTIDMTENGGETKMSELFQRRYAYPLIIGVGLMFLQQLCGSSGVTYYASSLFNKGGFPSAIGTSVIATIMV 339          
BLAST of CK739662 vs. ExPASy Swiss-Prot
Match: EDL14_ARATH (Sugar transporter ERD6-like 14 OS=Arabidopsis thaliana GN=At4g04750 PE=2 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 1.033e-12
Identity = 37/84 (44.05%), Postives = 54/84 (64.29%), Query Frame = 2
Query:    5 ADITHEAAEIQDYIETLER--LPKAGMLDLFQRRYLRSVTIGVGLMVFQQFGGINGICFYTSTIFESAGFSSSVGTIIYAILQV 250
            +D++ EAA I +Y + +E+  +   G   LFQR+Y   +TIGV L+   Q GG+NG  FYT TIF S G SS +G I+ +I+Q+
Sbjct:  236 SDVSDEAATILEYTKHVEQQDIDSRGFFKLFQRKYALPLTIGVVLISMPQLGGLNGYTFYTDTIFTSTGVSSDIGFILTSIVQM 319          
BLAST of CK739662 vs. ExPASy Swiss-Prot
Match: EDL18_ARATH (Sugar transporter ERD6-like 18 OS=Arabidopsis thaliana GN=SFP2 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 3.007e-12
Identity = 31/83 (37.35%), Postives = 53/83 (63.86%), Query Frame = 2
Query:    2 DADITHEAAEIQDYIETLERLPKAGMLDLFQRRYLRSVTIGVGLMVFQQFGGINGICFYTSTIFESAGFSSSVGTIIYAILQV 250
            +ADI+ EA++I+   + +E   K+   DLFQR+Y  ++ +G+GLM+ QQF G + +  Y STI   AGFS ++G+ +  +  +
Sbjct:  234 NADISREASDIEVMTKMVENDSKSSFCDLFQRKYRYTLVVGIGLMLIQQFSGSSAVLSYASTILRKAGFSVTIGSTLLGLFMI 316          
BLAST of CK739662 vs. ExPASy Swiss-Prot
Match: ERDL4_ARATH (Sugar transporter ERD6-like 4 OS=Arabidopsis thaliana GN=At1g19450 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 3.927e-12
Identity = 37/84 (44.05%), Postives = 53/84 (63.10%), Query Frame = 2
Query:    2 DADITHEAAEIQDYIETLERLPKAGMLDLFQRRYLRSVTIGVGLMVFQQFGGINGICFYTSTIFESAGF-SSSVGTIIYAILQV 250
            + DIT E  EI+  + +  +      +DL +RRY   + +G+GL+  QQ GGING+ FY+STIFESAG  SS+V T    ++QV
Sbjct:  248 ETDITVEVNEIKRSVASSSKRSAVRFVDLKRRRYYFPLMVGIGLLALQQLGGINGVLFYSSTIFESAGVTSSNVATFGVGVVQV 331          
BLAST of CK739662 vs. ExPASy Swiss-Prot
Match: EDL15_ARATH (Sugar transporter ERD6-like 15 OS=Arabidopsis thaliana GN=At4g04760 PE=2 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 3.927e-12
Identity = 37/85 (43.53%), Postives = 54/85 (63.53%), Query Frame = 2
Query:    5 ADITHEAAEIQDYIETLER---LPKAGMLDLFQRRYLRSVTIGVGLMVFQQFGGINGICFYTSTIFESAGFSSSVGTIIYAILQV 250
            +D++ EAAEI +Y E +++   +   G   LFQR+Y  S+TIGV L+   Q GG+NG  FYT +IF S G SS  G I  +++Q+
Sbjct:  231 SDVSDEAAEILEYTEHVKQQQDIDDRGFFKLFQRKYAFSLTIGVVLIALPQLGGLNGYSFYTDSIFISTGVSSDFGFISTSVVQM 315          
BLAST of CK739662 vs. ExPASy Swiss-Prot
Match: ERDL6_ARATH (Sugar transporter ERD6-like 6 OS=Arabidopsis thaliana GN=At1g75220 PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 8.748e-12
Identity = 34/72 (47.22%), Postives = 48/72 (66.67%), Query Frame = 2
Query:    2 DADITHEAAEIQDYIETLERLPKAGMLDLFQRRYLRSVTIGVGLMVFQQFGGINGICFYTSTIFESAGFSSS 217
            + DIT E  EI+  + +  +      +DL +RRY   + +G+GL+V QQ GGING+ FY+STIFESAG +SS
Sbjct:  247 ETDITVEVNEIKRSVASSTKRNTVRFVDLKRRRYYFPLMVGIGLLVLQQLGGINGVLFYSSTIFESAGVTSS 318          
BLAST of CK739662 vs. ExPASy Swiss-Prot
Match: ERDL2_ARATH (Sugar transporter ERD6-like 2 OS=Arabidopsis thaliana GN=SUGTL3 PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 3.324e-11
Identity = 34/83 (40.96%), Postives = 52/83 (62.65%), Query Frame = 2
Query:    2 DADITHEAAEIQDYIETLERLPKAGMLDLFQRRYLRSVTIGVGLMVFQQFGGINGICFYTSTIFESAGFSSSVGTIIYAILQV 250
            ++DI  EAAEI++ +E   +  ++G+ DLF      S+ IG+GLM+ QQF G   I  Y + IF+ AGF S +GT I A++ +
Sbjct:  224 NSDILKEAAEIRETVEISRKESQSGIRDLFHIGNAHSLIIGLGLMLLQQFCGSAAISAYAARIFDKAGFPSDIGTTILAVILI 306          
The following BLAST results are available for this feature:
BLAST of CK739662 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 17
Match NameE-valueIdentityDescription
ERD6_ARATH6.058e-1343.37Sugar transporter ERD6 OS=Arabidopsis thaliana GN=... [more]
EDL14_ARATH1.033e-1244.05Sugar transporter ERD6-like 14 OS=Arabidopsis thal... [more]
EDL18_ARATH3.007e-1237.35Sugar transporter ERD6-like 18 OS=Arabidopsis thal... [more]
ERDL4_ARATH3.927e-1244.05Sugar transporter ERD6-like 4 OS=Arabidopsis thali... [more]
EDL15_ARATH3.927e-1243.53Sugar transporter ERD6-like 15 OS=Arabidopsis thal... [more]
ERDL6_ARATH8.748e-1247.22Sugar transporter ERD6-like 6 OS=Arabidopsis thali... [more]
ERDL2_ARATH3.324e-1140.96Sugar transporter ERD6-like 2 OS=Arabidopsis thali... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_6049 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE58B08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK739662 ID=CK739662; Name=CK739662; organism=Citrus sinensis; type=EST; length=250bp
GGATGCTGATATAACACATGAGGCAGCTGAAATCCAGGATTACATAGAAA
CTCTAGAAAGGCTTCCAAAAGCTGGAATGCTGGATTTGTTTCAAAGAAGA
TACTTGCGCTCAGTCACGATTGGAGTCGGATTGATGGTGTTTCAACAATT
TGGTGGAATCAATGGAATCTGTTTTTACACCAGCACTATTTTTGAGTCAG
CAGGATTTTCTTCCAGCGTTGGAACAATAATCTATGCCATACTTCAGGTG
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