CK739667

Overview
NameCK739667
Unique NameCK739667
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length642
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK739667 vs. ExPASy Swiss-Prot
Match: METK3_SOLLC (S-adenosylmethionine synthetase 3 OS=Solanum lycopersicum GN=SAM3 PE=2 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 1.922e-48
Identity = 93/111 (83.78%), Postives = 102/111 (91.89%), Query Frame = 2
Query:    2 KVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLK 334
            KVDRSGAYIVRQAAKS+VA+GLARRCIVQVSYAIGV EPLSVFVD+Y TG IPDK+IL ++KE+FDFRPGMM+INLDL RGGN R+ KTAAYGHFGRDDPDFTWE VK LK
Sbjct:  277 KVDRSGAYIVRQAAKSVVASGLARRCIVQVSYAIGVAEPLSVFVDTYKTGTIPDKDILVLIKENFDFRPGMMSINLDLLRGGNYRYQKTAAYGHFGRDDPDFTWETVKVLK 387          
BLAST of CK739667 vs. ExPASy Swiss-Prot
Match: METK2_SOLTU (S-adenosylmethionine synthetase 2 OS=Solanum tuberosum GN=METK2 PE=2 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 1.922e-48
Identity = 93/111 (83.78%), Postives = 102/111 (91.89%), Query Frame = 2
Query:    2 KVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLK 334
            KVDRSGAYIVRQAAKS+VA+GLARRCIVQVSYAIGV EPLSVFVD+Y TG IPDK+IL ++KE+FDFRPGMM+INLDL RGGN R+ KTAAYGHFGRDDPDFTWE VK LK
Sbjct:  277 KVDRSGAYIVRQAAKSVVASGLARRCIVQVSYAIGVAEPLSVFVDTYKTGTIPDKDILVLIKENFDFRPGMMSINLDLLRGGNFRYQKTAAYGHFGRDDPDFTWETVKVLK 387          
BLAST of CK739667 vs. ExPASy Swiss-Prot
Match: METK1_PETHY (S-adenosylmethionine synthetase 1 OS=Petunia hybrida GN=SAM1 PE=2 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 3.278e-48
Identity = 95/117 (81.20%), Postives = 104/117 (88.89%), Query Frame = 2
Query:    2 KVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQA 352
            KVDRSGAYIVRQAAKS+VA+GLARRCIVQVSYAIGV EPLSVFVD+Y TG IPDK+IL ++KE+FDFRPGMM+INLDL RGGN R+ KTAAYGHFGRDDPDFTWE VK L    PQA
Sbjct:  277 KVDRSGAYIVRQAAKSVVASGLARRCIVQVSYAIGVAEPLSVFVDTYKTGTIPDKDILTLIKENFDFRPGMMSINLDLLRGGNFRYQKTAAYGHFGRDDPDFTWETVKVL---NPQA 390          
BLAST of CK739667 vs. ExPASy Swiss-Prot
Match: METK1_TOBAC (S-adenosylmethionine synthetase 1 OS=Nicotiana tabacum GN=SAMS1 PE=2 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 4.281e-48
Identity = 92/111 (82.88%), Postives = 102/111 (91.89%), Query Frame = 2
Query:    2 KVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLK 334
            KVDRSGAYIVRQAAKS+VA+GLARRCIVQVSYAIGV EPLSVFVD+Y TG IPDK+IL ++KE+FDFRPGMM+INLDL RGGN R+ KTAAYGHFGRDDPDF+WE VK LK
Sbjct:  277 KVDRSGAYIVRQAAKSVVASGLARRCIVQVSYAIGVAEPLSVFVDTYKTGTIPDKDILTLIKENFDFRPGMMSINLDLLRGGNFRYQKTAAYGHFGRDDPDFSWETVKVLK 387          
BLAST of CK739667 vs. ExPASy Swiss-Prot
Match: METK1_ACTCH (S-adenosylmethionine synthetase 1 OS=Actinidia chinensis GN=SAM1 PE=2 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 4.281e-48
Identity = 92/111 (82.88%), Postives = 102/111 (91.89%), Query Frame = 2
Query:    2 KVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLK 334
            KVDRSGAYIVRQAAKS+VA+GLARRC+VQVSYAIGV EPLSVFVD+Y TGKI DK+IL ++KE+FDFRPGM+ INLDLKRGGN R+ KTAAYGHFGRDDPDFTWE VK LK
Sbjct:  277 KVDRSGAYIVRQAAKSVVASGLARRCLVQVSYAIGVAEPLSVFVDTYKTGKIADKDILALIKENFDFRPGMIAINLDLKRGGNLRYQKTAAYGHFGRDDPDFTWETVKILK 387          
BLAST of CK739667 vs. ExPASy Swiss-Prot
Match: METK2_PETHY (S-adenosylmethionine synthetase 2 OS=Petunia hybrida GN=SAM2 PE=2 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 2.775e-47
Identity = 93/117 (79.49%), Postives = 103/117 (88.03%), Query Frame = 2
Query:    2 KVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQA 352
            KVDRSGAYIVRQAAKS+VA+GLARRCIVQVSYAIGV EPLSVFVD+Y TG IP K++L ++KE+FDFRPGMM+INLDL RGGN R+ KTAAYGHFGRDDPDFTWE VK L    PQA
Sbjct:  277 KVDRSGAYIVRQAAKSVVASGLARRCIVQVSYAIGVAEPLSVFVDTYKTGTIPGKDVLTLIKENFDFRPGMMSINLDLLRGGNFRYQKTAAYGHFGRDDPDFTWETVKVL---NPQA 390          
BLAST of CK739667 vs. ExPASy Swiss-Prot
Match: METK3_CATRO (S-adenosylmethionine synthetase 3 OS=Catharanthus roseus GN=SAMS3 PE=1 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 4.733e-47
Identity = 90/111 (81.08%), Postives = 101/111 (90.99%), Query Frame = 2
Query:    2 KVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLK 334
            KVDRSGAYIVRQAAKS+VA+GLARRC+VQVSYAIGV EPLSVFVD++ TGKIPDK+IL ++KE+FDFRPGM+ INLDLKRGGN R+ KTAA GH GRDDPDFTWE VK LK
Sbjct:  277 KVDRSGAYIVRQAAKSVVASGLARRCLVQVSYAIGVAEPLSVFVDTFKTGKIPDKDILALIKENFDFRPGMIAINLDLKRGGNFRYQKTAALGHLGRDDPDFTWETVKILK 387          
BLAST of CK739667 vs. ExPASy Swiss-Prot
Match: METK2_TOBAC (S-adenosylmethionine synthetase 2 OS=Nicotiana tabacum GN=SAMS2 PE=2 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 2.349e-46
Identity = 90/111 (81.08%), Postives = 99/111 (89.19%), Query Frame = 2
Query:    2 KVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLK 334
            KVDRSGAYIVRQAAKS+VA GLARRCIVQVSYAIGV EPLSVFVD+Y TG IPDK+IL ++KE+FDFRPGM+ INLDL RGGN R+ KTAAYGHFGRD+ DFTWE VK LK
Sbjct:  277 KVDRSGAYIVRQAAKSVVAAGLARRCIVQVSYAIGVAEPLSVFVDTYKTGTIPDKDILALIKENFDFRPGMIAINLDLLRGGNFRYQKTAAYGHFGRDEADFTWETVKALK 387          
BLAST of CK739667 vs. ExPASy Swiss-Prot
Match: METK_CHLRE (S-adenosylmethionine synthetase OS=Chlamydomonas reinhardtii GN=METM PE=3 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 5.786e-45
Identity = 84/111 (75.68%), Postives = 99/111 (89.19%), Query Frame = 2
Query:    2 KVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLK 334
            KVDRSGAYI RQAAKS+VA+GLA+RC+VQVSY+I V EPLSVFVD+YGTG +PD EILK++++ FDFRPG++  NLDLKRGGN R+ KTAAYGHFGRDDPDFTWE VK L+
Sbjct:  280 KVDRSGAYIARQAAKSVVASGLAKRCLVQVSYSIAVAEPLSVFVDTYGTGTMPDAEILKLIRKHFDFRPGLIGKNLDLKRGGNKRYQKTAAYGHFGRDDPDFTWETVKKLE 390          
BLAST of CK739667 vs. ExPASy Swiss-Prot
Match: METK_OSTLU (S-adenosylmethionine synthetase OS=Ostreococcus lucimarinus (strain CCE9901) GN=METK-1 PE=3 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 1.248e-39
Identity = 84/112 (75.00%), Postives = 91/112 (81.25%), Query Frame = 2
Query:    2 KVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDD--PDFTWEVVKPL 331
            KVDRSGAYI RQAAKS+VA GLARRC+ Q+SYAIGV EPLSV VD+YGTGKIPD EIL  VK +FDFRPGMM   LDLKRGGN R+  TAAYGHFGRD+    FTWE V PL
Sbjct:  276 KVDRSGAYISRQAAKSVVAAGLARRCLFQISYAIGVAEPLSVHVDTYGTGKIPDSEILAKVKAAFDFRPGMMGKALDLKRGGNKRYQTTAAYGHFGRDEDLDIFTWEKVVPL 387          
The following BLAST results are available for this feature:
BLAST of CK739667 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK3_SOLLC1.922e-4883.78S-adenosylmethionine synthetase 3 OS=Solanum lycop... [more]
METK2_SOLTU1.922e-4883.78S-adenosylmethionine synthetase 2 OS=Solanum tuber... [more]
METK1_PETHY3.278e-4881.20S-adenosylmethionine synthetase 1 OS=Petunia hybri... [more]
METK1_TOBAC4.281e-4882.88S-adenosylmethionine synthetase 1 OS=Nicotiana tab... [more]
METK1_ACTCH4.281e-4882.88S-adenosylmethionine synthetase 1 OS=Actinidia chi... [more]
METK2_PETHY2.775e-4779.49S-adenosylmethionine synthetase 2 OS=Petunia hybri... [more]
METK3_CATRO4.733e-4781.08S-adenosylmethionine synthetase 3 OS=Catharanthus ... [more]
METK2_TOBAC2.349e-4681.08S-adenosylmethionine synthetase 2 OS=Nicotiana tab... [more]
METK_CHLRE5.786e-4575.68S-adenosylmethionine synthetase OS=Chlamydomonas r... [more]
METK_OSTLU1.248e-3975.00S-adenosylmethionine synthetase OS=Ostreococcus lu... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUSDA-FP_6054 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone 58C01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK739667 ID=CK739667; Name=CK739667; organism=Citrus sinensis; type=EST; length=642bp
TAAGGTGGATAGGAGTGGTGCATACATTGTTAGGCAGGCTGCTAAGAGCA
TTGTTGCAAACGGGCTTGCTCGCAGGTGCATTGTCCAAGTCTCCTATGCC
ATTGGTGTGCCTGAGCCATTGTCTGTTTTTGTGGACTCATATGGAACCGG
CAAGATTCCTGACAAGGAGATCCTCAAAATTGTGAAGGAAAGCTTTGATT
TCAGGCCAGGAATGATGACCATCAATTTGGATCTCAAAAGGGGCGGTAAT
GGCAGGTTCTTGAAGACTGCTGCCTATGGACACTTTGGCAGGGATGACCC
AGACTTCACTTGGGAAGTTGTGAAGCCCCTCAAGTGGGAAAAGCCTCAAG
CTTAAATTTGAGTTGAAAAGTGAAAACTATCCCTGCTGTTCAAGTTTGCT
TCTATTGGTAGTGGATGAATAATTTGAATATTATCTTGCTGCTGCTTTGT
AATACTAAGCAAATCTCCTGTGTTCAGAACTCATACATGTTCCCCATTCA
ATTCCTTTCTTTTTCTTCTTTCCCCACTTCTTTTTTGGTTTTGGTTTAAT
GTACCATGTCACCACTGTTGTGTAGTGATATCGATTGAGAATTTTGCTCA
ACTGGTGCCTGGAATTAGTAAAATTCTTCCTTTTGCTTACGA
back to top