CK739678
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK739678 vs. ExPASy Swiss-Prot
Match: PAP3_ORYSJ (Probable plastid-lipid-associated protein 3, chloroplastic OS=Oryza sativa subsp. japonica GN=PAP3 PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 5.916e-28 Identity = 53/122 (43.44%), Postives = 79/122 (64.75%), Query Frame = 2 Query: 116 EAKNPTPAPTEALTLLNAKWILVYTSFSGLFPLLSRGTLPLARVEEISQTIDSENFTGQNSIRFAGPLATTSISTNAKFEVRSPKRVQIKFEEGIIGTPQVTDSLVIPENVEFLGPKIDLSP 481 EA NPTP P +A LL WIL+YT++S L P+L+ G PL +V+EISQ ID+ + T N+ + P A+ S S A F+V+SP R++++F+EG P+++ S+ +P V+ G KI L P Sbjct: 182 EATNPTPEPVQATHLLAGNWILIYTAYSELLPILAVGAAPLFKVDEISQEIDTNSMTIVNASTISSPFASFSFSATASFDVQSPSRIEVQFKEGSFQPPKISSSVDLPAEVDIFGQKISLGP 303 HSP 2 Score: 29.6462 bits (65), Expect = 5.916e-28 Identity = 12/23 (52.17%), Postives = 17/23 (73.91%), Query Frame = 3 Query: 9 DNLKKALVDSFYGTDRGLNATSE 77 + LK+ LVD+ YG+D G A+SE Sbjct: 147 EELKRCLVDTVYGSDLGFRASSE 169
BLAST of CK739678 vs. ExPASy Swiss-Prot
Match: PAP3_ARATH (Probable plastid-lipid-associated protein 3, chloroplastic OS=Arabidopsis thaliana GN=PAP3 PE=1 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 4.270e-26 Identity = 58/124 (46.77%), Postives = 79/124 (63.71%), Query Frame = 2 Query: 116 EAKNPTPAPTEALTLLNAKWILVYTSFSGLFPLLSRGTLPLARVEEISQTIDSENFTGQNSIRFAGPLATTSISTNAKFEVRSPKRVQIKFEEGIIGTPQVTDSLVIPENVEFLGPKIDLSPFK 487 EA NPTPAP E LL+ W+L+YT+FS L PLL+ G+ PL +V+ ISQ+ID+ N NS + P A S S A FEVRSP R+++ F+EG + P + S+ +PE+V G +I LS K Sbjct: 186 EALNPTPAPLENPELLDGNWVLLYTAFSELIPLLAAGSTPLLKVKSISQSIDTNNLIIDNSTTLSSPFADFSFSATASFEVRSPSRIEVSFKEGTLKPPVIKSSVDLPESVGVFGQQISLSLLK 309
BLAST of CK739678 vs. ExPASy Swiss-Prot
Match: PAP3_BRACM (Plastid lipid-associated protein 3, chloroplastic OS=Brassica campestris GN=PAP3 PE=2 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 3.615e-25 Identity = 55/124 (44.35%), Postives = 82/124 (66.13%), Query Frame = 2 Query: 116 EAKNPTPAPTEALTLLNAKWILVYTSFSGLFPLLSRGTLPLARVEEISQTIDSENFTGQNSIRFAGPLATTSISTNAKFEVRSPKRVQIKFEEGIIGTPQVTDSLVIPENVEFLGPKIDLSPFK 487 EA NPT AP E LL+ W+L+YT+FS L PLL+ G+ PL +V+ ISQ+ID+++ + NS + P A S S A FEVR+P R+++ F+EG + P++ S+ +PE+V G +I+LS K Sbjct: 170 EALNPTQAPVENPELLDGNWVLLYTAFSELLPLLAAGSTPLLKVKSISQSIDTKSLSIDNSTTLSSPFADFSFSATASFEVRTPSRIEVSFKEGTLKPPEIKSSVDLPESVGVFGQEINLSFLK 293 The following BLAST results are available for this feature:
BLAST of CK739678 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 13
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Sequences
The
following sequences are available for this feature:
EST sequence >CK739678 ID=CK739678; Name=CK739678; organism=Citrus sinensis; type=EST; length=489bpback to top |