CK739685
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK739685 vs. ExPASy Swiss-Prot
Match: PYRD_XANP2 (Dihydroorotate dehydrogenase OS=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) GN=pyrD PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 4.563e-28 Identity = 65/143 (45.45%), Postives = 89/143 (62.24%), Query Frame = 1 Query: 1 VKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSNNPVAKETXXXXXXXXXXXXNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPALIPQIKAELAECLKRDGFKSIIEAVGADYR 429 VK+APDL L D+A ++A +DG+I+ NTT+SRP + + ET L +Y L G++P+IG GGI+SG DAY K+RAGA+LVQ+Y+A + GP L+ +IK +LA LK DGF SI +AVG D R Sbjct: 216 VKVAPDLDDAALADVAEASLATGVDGIIMGNTTLSRPASLQSK-FKDETGGLSGKPLLALSTERLGALYRLVGGRLPIIGVGGIASGADAYAKVRAGASLVQIYSALVFHGPGLVTRIKTDLAARLKADGFASIADAVGVDVR 357
BLAST of CK739685 vs. ExPASy Swiss-Prot
Match: PYRD_DROME (Dihydroorotate dehydrogenase, mitochondrial OS=Drosophila melanogaster GN=Dhod PE=1 SV=2) HSP 1 Score: 123.25 bits (308), Expect = 5.959e-28 Identity = 65/143 (45.45%), Postives = 93/143 (65.03%), Query Frame = 1 Query: 1 VKIAPDLSKEDLEDIAAVAVAL--RLDGLIISNTTISRPDPVSNNPVAKETXXXXXXXXXXXXNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPALIPQIKAELAECLKRDGFKSIIEAVGAD 423 +K++PDLS +D++DI V R+DGLI+SNTT+SR + + N +A+ET ++ +MY LT GKIP+IG GG++SG DAY KI AGA+ VQ+YTA Y GPAL+ IKAEL+ + R G ++ + VG + Sbjct: 257 LKLSPDLSLDDMKDIVWVIKRKKSRVDGLIVSNTTVSREN-IEKNKLAEETGGLSGPPLKARSTEMIAQMYQLTDGKIPIIGVGGVASGYDAYEKIEAGASYVQIYTALVYEGPALVEDIKAELSALITRLGHTNVADVVGTN 398
BLAST of CK739685 vs. ExPASy Swiss-Prot
Match: PYRD_ANAD2 (Dihydroorotate dehydrogenase OS=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) GN=pyrD PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 5.959e-28 Identity = 62/143 (43.36%), Postives = 88/143 (61.54%), Query Frame = 1 Query: 1 VKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSNNPVAKETXXXXXXXXXXXXNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPALIPQIKAELAECLKRDGFKSIIEAVGADYR 429 VK+APDLS E L++ VA+A G++ +NTT+SR V +P A E ++++ Y G++P++G GG+ E AY KIRAGATLVQ YT YGGPA + ++ A LA L+RDGF ++ +AVGAD+R Sbjct: 215 VKLAPDLSPEALDEAVDVAIAAGAAGIVATNTTLSRAG-VERHPRAAEAGGLSGAPLERLATDVVRRCYARAAGRVPIVGVGGVMDAEGAYAKIRAGATLVQAYTGLIYGGPAFVGRVNAGLARLLERDGFSTLSDAVGADHR 356
BLAST of CK739685 vs. ExPASy Swiss-Prot
Match: PYRD_ANADE (Dihydroorotate dehydrogenase OS=Anaeromyxobacter dehalogenans (strain 2CP-C) GN=pyrD PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 2.264e-27 Identity = 61/143 (42.66%), Postives = 86/143 (60.14%), Query Frame = 1 Query: 1 VKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSNNPVAKETXXXXXXXXXXXXNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPALIPQIKAELAECLKRDGFKSIIEAVGADYR 429 VK+APDLS E L++ VA+A G++ +NTT+SR V +P A E +++ Y G++P++G GG+ E AY KIRAGATLVQ YT YGGP + ++ A LA L+RDGF ++ +AVGAD+R Sbjct: 215 VKLAPDLSPEALDEAVDVAIAAGAAGIVATNTTLSRAG-VERHPRAAEAGGLSGAPLERLATEVVRRCYARAAGRVPIVGVGGVMDAEGAYAKIRAGATLVQAYTGLIYGGPGFVGRVNAGLARLLERDGFSTLSDAVGADHR 356
BLAST of CK739685 vs. ExPASy Swiss-Prot
Match: PYRD_MYXXD (Dihydroorotate dehydrogenase OS=Myxococcus xanthus (strain DK 1622) GN=pyrD PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 1.468e-26 Identity = 58/143 (40.56%), Postives = 91/143 (63.64%), Query Frame = 1 Query: 1 VKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSNNPVAKETXXXXXXXXXXXXNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPALIPQIKAELAECLKRDGFKSIIEAVGADYR 429 +KIAPDLS E ++++ VA A +L GLI +NTT++RP +P+AKE N +++ +L + G +P+IG GG+ + +D Y K+RAGA++VQ+YT F Y GP ++ I LA L RDG+K + + +GA++R Sbjct: 218 LKIAPDLSPEAVDEVVDVARAQKLAGLIATNTTVARP---FEHPLAKEAGGLSGAPVREPANAVIRRAWLRSGGALPIIGVGGVFTAQDVYEKLRAGASVVQVYTGFIYEGPGMVGNILPTLATLLARDGYKQVRDVIGAEHR 357
BLAST of CK739685 vs. ExPASy Swiss-Prot
Match: PYRD_ANASK (Dihydroorotate dehydrogenase OS=Anaeromyxobacter sp. (strain K) GN=pyrD PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 1.917e-26 Identity = 59/143 (41.26%), Postives = 86/143 (60.14%), Query Frame = 1 Query: 1 VKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSNNPVAKETXXXXXXXXXXXXNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPALIPQIKAELAECLKRDGFKSIIEAVGADYR 429 VK+APDLS E L++ VA+A G++ +NTT+SR V +P A E ++++ Y G++P++G GG+ E AY KIRAGATLVQ YT YGGP + ++ A LA L+RD F ++ +A+GAD+R Sbjct: 215 VKLAPDLSPEALDEAVDVAIAAGAAGIVATNTTLSRAG-VERHPRAAEAGGLSGAPLERLATDVVRRCYARAAGRVPIVGVGGVMDAEGAYAKIRAGATLVQAYTGLIYGGPGFVGRVNAGLARLLERDEFSTLSDAIGADHR 356
BLAST of CK739685 vs. ExPASy Swiss-Prot
Match: PYRD_METC4 (Dihydroorotate dehydrogenase OS=Methylobacterium chloromethanicum (strain CM4 / NCIMB 13688) GN=pyrD PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 2.504e-26 Identity = 65/147 (44.22%), Postives = 87/147 (59.18%), Query Frame = 1 Query: 1 VKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSNNPVAKETXXXXXXXXXXXXNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPALIPQIKAELAECLKRDGFKSIIEAVGADYR*LRR 441 +KIAPD++ E L+ + A A+ + GL++SNTTI+RP + + VAKET +L E YL +IPLIG GGI S E A+ KIRAGA LVQLY+A Y GP L+ IK L++ L+ +G S+ VG D L R Sbjct: 210 LKIAPDIALEGLDAMTATALRRGIQGLVVSNTTIARPSSLVESSVAKETGGLSGRPLFGLSTRLLAETYLRVGDRIPLIGVGGIDSAEAAWAKIRAGARLVQLYSALVYEGPGLVGTIKRGLSQRLRAEGLTSLAPVVGRDAAALAR 356
BLAST of CK739685 vs. ExPASy Swiss-Prot
Match: PYRD_BRAJA (Dihydroorotate dehydrogenase OS=Bradyrhizobium japonicum GN=pyrD PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 4.722e-25 Identity = 60/141 (42.55%), Postives = 83/141 (58.87%), Query Frame = 1 Query: 1 VKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSNNPVAKETXXXXXXXXXXXXNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPALIPQIKAELAECLKRDGFKSIIEAVGAD 423 +KIAPDLS L+D+ VA + R+DG+I+SNTTI+RP + AKE ++ E Y+ G PL+G GG+ SG A KIRAGA+L+QLY++ Y G L+ +IK +L L R G S+ + VGAD Sbjct: 213 LKIAPDLSLAQLDDVVQVARSRRVDGMIVSNTTIARPSTLREEMRAKEQGGLSGRPLFRLSTRMVAETYVRVEGAFPLVGVGGVDSGGAALTKIRAGASLIQLYSSLVYKGLGLVEEIKRDLTSTLLRTGRDSLSDIVGAD 353
BLAST of CK739685 vs. ExPASy Swiss-Prot
Match: PYRD_RHOPT (Dihydroorotate dehydrogenase OS=Rhodopseudomonas palustris (strain TIE-1) GN=pyrD PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 1.052e-24 Identity = 62/141 (43.97%), Postives = 82/141 (58.16%), Query Frame = 1 Query: 1 VKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSNNPVAKETXXXXXXXXXXXXNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPALIPQIKAELAECLKRDGFKSIIEAVGAD 423 +KIAPDLS +L+D+ +A + R+DG+I++NTT+SR + E ++ E ++ G PLIG GGI SG A KIRAGATLVQLY+A Y G L+ IKA+LA L R G S+ E VGAD Sbjct: 213 LKIAPDLSLGELDDVVHIARSRRVDGMIVANTTLSRSPTLRERTKMNEQGGLSGRPLFRLSTRMVAETFVRAEGAFPLIGVGGIDSGGAALTKIRAGATLVQLYSALVYKGLGLVESIKADLASTLLRTGRDSLAEIVGAD 353
BLAST of CK739685 vs. ExPASy Swiss-Prot
Match: PYRD_SACKL (Dihydroorotate dehydrogenase, mitochondrial OS=Saccharomyces kluyveri GN=URA9 PE=1 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 1.374e-24 Identity = 65/144 (45.14%), Postives = 89/144 (61.81%), Query Frame = 1 Query: 1 VKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSNNPVA--KETXXXXXXXXXXXXNNILKEMYLLTR-GKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPALIPQIKAELAECLKRDGFKSIIEAVGAD 423 VKIAPDL++ +LE IA A ++DG+I+SNTTI RPD + A +T LK +Y T+ ++ L+GCGGISSG+DA +AGAT VQLYT++AY GP LI IK E+ E LK++G K+ + +G D Sbjct: 302 VKIAPDLTEPELESIAVAAKKSKVDGIIVSNTTIQRPDSLVTRDEALKSQTGGLSGKPLKPFALKALKTVYKYTKDSELVLVGCGGISSGQDAIEFAKAGATFVQLYTSYAYKGPGLIAHIKDEVTEELKKEG-KTWNQIIGED 444 The following BLAST results are available for this feature:
BLAST of CK739685 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 388
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Sequences
The
following sequences are available for this feature:
EST sequence >CK739685 ID=CK739685; Name=CK739685; organism=Citrus sinensis; type=EST; length=488bpback to top |