CK739685
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK739685 vs. ExPASy Swiss-Prot
Match: PYRD_SCHPO (Dihydroorotate dehydrogenase, mitochondrial OS=Schizosaccharomyces pombe GN=ura3 PE=1 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 4.419e-23 Identity = 58/135 (42.96%), Postives = 79/135 (58.52%), Query Frame = 1 Query: 1 VKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSNNPVAKETXXXXXXXXXXXXNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPALIPQIKAELAECLKRDGFKSII 405 VKIAPDL++E+L DIA V ++DG+I+ NTT+ RP + + +ET N L+ + IP+IGCGGISSG+DA RAGAT+VQ+YTA Y GP + +IK E+ LK + II Sbjct: 305 VKIAPDLNEEELTDIADVLKKCKIDGVIVGNTTVQRPKTLKSTSHVEETGGLSGPPLKPIALNTLRTLRKHLSSDIPIIGCGGISSGKDAIEYARAGATMVQVYTALGYDGPVIAHKIKQEILAELKGKRWVDII 439
BLAST of CK739685 vs. ExPASy Swiss-Prot
Match: PYRD_RHOPS (Dihydroorotate dehydrogenase OS=Rhodopseudomonas palustris (strain BisB5) GN=pyrD PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 4.419e-23 Identity = 59/141 (41.84%), Postives = 81/141 (57.45%), Query Frame = 1 Query: 1 VKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSNNPVAKETXXXXXXXXXXXXNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPALIPQIKAELAECLKRDGFKSIIEAVGAD 423 +KIAPDL+ +L+D+ +A + ++DG+I++NTT+SR + E ++ E Y+ G PLIG GGI SG A KIRAGA+LVQLY+A Y G L+ IK +LA L R G S+ E VGAD Sbjct: 213 LKIAPDLTLGELDDVVHIARSRKVDGMIVANTTLSRSPLLRERTRMNEQGGLSGRPLFRLSTRMVAETYVRAEGAFPLIGVGGIDSGGAALTKIRAGASLVQLYSALIYKGLGLVESIKTDLASTLLRTGRDSLAEIVGAD 353
BLAST of CK739685 vs. ExPASy Swiss-Prot
Match: PYRD_RHILO (Dihydroorotate dehydrogenase OS=Rhizobium loti GN=pyrD PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 4.419e-23 Identity = 64/136 (47.06%), Postives = 81/136 (59.56%), Query Frame = 1 Query: 1 VKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSNNPVAKETXXXXXXXXXXXXNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPALIPQIKAELAECLKRDGFKSIIE 408 +KIAPDL + +LEDIAA V R+DG+I+SNTTISRP P+ + V +ET +L +M L I +IG GG+ S E A KIRAGA LVQLYT Y GPAL +I A +A + + KSI E Sbjct: 210 LKIAPDLVEAELEDIAAEVVEKRIDGIIVSNTTISRP-PLRSGDVGRETGGLSGKPLFERSTIVLAKMRKLLGPGIAIIGVGGVDSAETALEKIRAGADLVQLYTGMIYAGPALPGRIVAGMARFCETERLKSIGE 344
BLAST of CK739685 vs. ExPASy Swiss-Prot
Match: PYRD_NOCFA (Dihydroorotate dehydrogenase OS=Nocardia farcinica GN=pyrD PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 1.286e-22 Identity = 61/146 (41.78%), Postives = 87/146 (59.59%), Query Frame = 1 Query: 1 VKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSNNP---VAKETXXXXXXXXXXXXNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPALIPQIKAELAECLKRDGFKSIIEAVGADYR 429 VKIAPDLS ED++ +A +AV L L G++ +NTTI R D + +P A +L+ +Y ++ LI GGI + E AY+++ AGA+L+Q YT F YGGP +I LAE L+RDG+ S+ EAVGA++R Sbjct: 216 VKIAPDLSDEDIDAVADLAVELGLAGIVATNTTIRR-DGLHTDPEDVAAMGAGGLSGAPVADRSLEVLRRLYRRVGDRLALISVGGIETPEQAYQRVLAGASLLQGYTGFIYGGPFWTRKIHRGLAELLRRDGYTSLTEAVGAEHR 360
BLAST of CK739685 vs. ExPASy Swiss-Prot
Match: PYRD_HALMA (Dihydroorotate dehydrogenase OS=Haloarcula marismortui GN=pyrD PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 1.286e-22 Identity = 57/141 (40.43%), Postives = 85/141 (60.28%), Query Frame = 1 Query: 1 VKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSNNPVAKETXXXXXXXXXXXXNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPALIPQIKAELAECLKRDGFKSIIEAVGAD 423 VK++PDL + +ED + L LDG++ +NTT RP + +P A ET +++ ++ R +P++G GG+S+ E AYRKIRAGA+LVQLYT Y GP++ +I + L + L DGF S+ +AVGAD Sbjct: 212 VKLSPDLPEPAVEDALDLVTELDLDGVVATNTTTERPASL-RSPNAVETGGLSGKPIENQATEMVR--FVAERVDVPVVGVGGVSTAEGAYRKIRAGASLVQLYTGLVYRGPSIAREINSGLRDLLAEDGFDSVEDAVGAD 349
BLAST of CK739685 vs. ExPASy Swiss-Prot
Match: PYRD_DEIRA (Dihydroorotate dehydrogenase OS=Deinococcus radiodurans GN=pyrD PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 1.286e-22 Identity = 55/139 (39.57%), Postives = 82/139 (58.99%), Query Frame = 1 Query: 1 VKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSNNPVAKETXXXXXXXXXXXXNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPALIPQIKAELAECLKRDGFKSIIEAVG 417 VK+APDL D E + GLIISNTT+SR ++P ++ ++++ Y LTRG++P++G GG+ S EDAY K+ AGA LV++Y+A Y GP L+ +I A L + L+RDG ++I + VG Sbjct: 231 VKLAPDLHPADFEASVGAVLDAGASGLIISNTTLSRGG--LSHPNREQAGGLSGRPLTDRSTELVRDAYRLTRGQVPIVGVGGVFSAEDAYAKLLAGADLVEVYSALIYRGPGLVREINAGLVKLLERDGVRNIADVVG 367
BLAST of CK739685 vs. ExPASy Swiss-Prot
Match: PYRD2_KLULA (Dihydroorotate dehydrogenase, mitochondrial OS=Kluyveromyces lactis GN=URA9 PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 1.286e-22 Identity = 61/146 (41.78%), Postives = 88/146 (60.27%), Query Frame = 1 Query: 1 VKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPV--SNNPVAKETXXXXXXXXXXXXNNILKEMYLLTRGK-IPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPALIPQIKAELAECLKRDGFKSIIEAVGADYR 429 VK+APDL +E+++ IA A ++DG+IISNTTI RP + ++ + + LK M T+G + L+GCGGISSG DA +AGA++V+LYTA+AY GP LI +IK E E LK++ K+ E +G D + Sbjct: 301 VKVAPDLVEEEIKSIAEAAKKSKVDGIIISNTTIQRPTTLITEDSDLVSQAGGLSGKPLKPLALKALKTMAKYTKGSGLVLVGCGGISSGADAIEFAKAGASMVELYTAYAYKGPGLIAKIKDETTELLKKEN-KTWSEIIGEDIK 445
BLAST of CK739685 vs. ExPASy Swiss-Prot
Match: PYRD_ROSCS (Dihydroorotate dehydrogenase OS=Roseiflexus castenholzii (strain DSM 13941 / HLO8) GN=pyrD PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 2.864e-22 Identity = 55/141 (39.01%), Postives = 81/141 (57.45%), Query Frame = 1 Query: 1 VKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSNNPVAKETXXXXXXXXXXXXNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPALIPQIKAELAECLKRDGFKSIIEAVGAD 423 +KI+PD + + +E++ + I +NTT++R S +A ET +++ +Y LTRG P+IG GG+ + +DAY IRAGA LVQLYT Y GPA+ +IK LA+ L+RDGF S+ +A G D Sbjct: 218 LKISPDETLDQIEEVVRAGCEAGVAAFIATNTTLAREGLRSR--LANETGGLSGRPLAPRARQVIRAIYRLTRGTPPVIGVGGVLTADDAYAHIRAGARLVQLYTGMVYAGPAIAREIKRGLAQLLRRDGFVSVTQATGVD 356
BLAST of CK739685 vs. ExPASy Swiss-Prot
Match: PYRD_CANGA (Dihydroorotate dehydrogenase, mitochondrial OS=Candida glabrata GN=URA9 PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 2.864e-22 Identity = 62/145 (42.76%), Postives = 88/145 (60.69%), Query Frame = 1 Query: 1 VKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSNNPVAKETXXXXXXXXXXXXNNILKEMYLLTR----GKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPALIPQIKAELAECLKRDGFKSIIEAVGAD 423 VKIAPDL++ +L+ I A ++DG+I+SNTTI RP+ + LK M +++ + L+GCGGISSG+DA +AGAT VQLYT++AY GPALI +IK E+AE LK++G K+ +E +G D Sbjct: 295 VKIAPDLTEPELQSIVEAAKKSKVDGIIVSNTTIQRPNTLKTQDETLRNQVGGLSGKPLKPF-ALKAMKAVSKYAKDSDLVLVGCGGISSGKDAIEFAKAGATFVQLYTSYAYVGPALIARIKDEVAEELKKEG-KTWMEIIGED 437
BLAST of CK739685 vs. ExPASy Swiss-Prot
Match: PYRD_ASHGO (Dihydroorotate dehydrogenase, mitochondrial OS=Ashbya gossypii GN=URA9 PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 6.381e-22 Identity = 60/144 (41.67%), Postives = 87/144 (60.42%), Query Frame = 1 Query: 1 VKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVS--NNPVAKETXXXXXXXXXXXXNNILKEMYLLTRG-KIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPALIPQIKAELAECLKRDGFKSIIEAVGAD 423 VKIAPDL++ +L+ IA A +DG+I+SNTTI RPD + + + + L+ ++ T+ + L+GCGGISSG+DA +AGA VQLYTA+AY GP LI +IK E+ E L+ +G K+ +E +G D Sbjct: 300 VKIAPDLTEPELQSIAEAAKKSSIDGIIVSNTTIQRPDSLYTVDEELKNQAGGLSGKPVKPFALKALRTIHQYTKDTNLVLVGCGGISSGQDAIEFAKAGAHFVQLYTAYAYRGPGLIARIKDEVTEELRNEG-KTWMEIIGQD 442 The following BLAST results are available for this feature:
BLAST of CK739685 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 388
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Sequences
The
following sequences are available for this feature:
EST sequence >CK739685 ID=CK739685; Name=CK739685; organism=Citrus sinensis; type=EST; length=488bpback to top |