CK739685
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK739685 vs. ExPASy Swiss-Prot
Match: PYRD_ENT38 (Dihydroorotate dehydrogenase OS=Enterobacter sp. (strain 638) GN=pyrD PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 6.396e-14 Identity = 46/118 (38.98%), Postives = 65/118 (55.08%), Query Frame = 1 Query: 1 VKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSNNPVAKETXXXXXXXXXXXXNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPALIPQI 354 VKIAPDLS E+L +A V +DG+I +NTT+ R V+ E I++ + +G++P+IG GGI S A K+ AGATLVQ+Y+ F + GP LI +I Sbjct: 216 VKIAPDLSVEELIQVADSLVRHNIDGVIATNTTLDR-SLVNGMKHCDEMGGLSGRPVQLKSTEIIRALSAELKGRLPIIGVGGIDSVIAAREKMAAGATLVQIYSGFIFKGPQLIKEI 332
BLAST of CK739685 vs. ExPASy Swiss-Prot
Match: PYRD_SALAR (Dihydroorotate dehydrogenase OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=pyrD PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 8.354e-14 Identity = 45/118 (38.14%), Postives = 65/118 (55.08%), Query Frame = 1 Query: 1 VKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSNNPVAKETXXXXXXXXXXXXNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPALIPQI 354 VKIAPDL +E+L +A + +DG+I +NTT+ R V ++T I++ + G++P+IG GGI S A KI AGATLVQ+Y+ F + GP LI +I Sbjct: 216 VKIAPDLCEEELIQVADSLLRHNIDGVIATNTTLDR-SLVQGMKNCQQTGGLSGRPLQLKSTEIIRRLSQELNGQLPIIGVGGIDSVIAAREKIAAGATLVQIYSGFIFKGPPLIKEI 332
BLAST of CK739685 vs. ExPASy Swiss-Prot
Match: PYRD_ACTPJ (Dihydroorotate dehydrogenase OS=Actinobacillus pleuropneumoniae serotype 3 (strain JL03) GN=pyrD PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 8.354e-14 Identity = 44/118 (37.29%), Postives = 64/118 (54.24%), Query Frame = 1 Query: 1 VKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSNNPVAKETXXXXXXXXXXXXNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPALIPQI 354 +KIAPDL+ E++ +A V ++DG+I NTT+SR DPV A+ ++ + G +P+IG GGI S KI AGA+L+Q+Y+A Y GPALI + Sbjct: 212 LKIAPDLTDEEIASVADGLVRHKIDGVIAGNTTLSR-DPVVGLKNAEHQGGLSGNPLNTLSTRLISTLAKELNGALPIIGSGGIHSVASGQEKIDAGASLLQVYSAMIYQGPALIQNL 328
BLAST of CK739685 vs. ExPASy Swiss-Prot
Match: PYRD_THET8 (Dihydroorotate dehydrogenase OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=pyrD PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 1.091e-13 Identity = 45/136 (33.09%), Postives = 74/136 (54.41%), Query Frame = 1 Query: 1 VKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSNNPVAKETXXXXXXXXXXXXNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPALIPQIKAELAECLKRDGFKSIIE 408 +K+APDLS + L+++ A+A RL GL+ NTT++R S P AKE +L+ + G + L+ GG+ + D + +++AGA+LVQ+YT F YGGP ++ L ++ +G S+ E Sbjct: 210 LKVAPDLSPKALDEVLALAKKHRLQGLVAVNTTLAREGLKS--PWAKEAGGLSGRPLKGRALEVLRHLAEGAEG-LALVSVGGVETPLDLWERLKAGASLVQVYTGFVYGGPLFPRRLLLGLLRLMEAEGVSSLGE 342
BLAST of CK739685 vs. ExPASy Swiss-Prot
Match: PYRD_SERP5 (Dihydroorotate dehydrogenase OS=Serratia proteamaculans (strain 568) GN=pyrD PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 1.091e-13 Identity = 44/118 (37.29%), Postives = 66/118 (55.93%), Query Frame = 1 Query: 1 VKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSNNPVAKETXXXXXXXXXXXXNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPALIPQI 354 VKIAPDLS+E+L IA V +DG+I +NTT+ R + ++ +++ + L +G++P+IG GGI S A K+ AGA+LVQ+Y+ F + GP LI I Sbjct: 216 VKIAPDLSEEELIQIADSLVRHNIDGVIATNTTLDRK-LIQGLNYCEQMGGLSGRPLQASSTEVIRRLSLELQGRLPIIGVGGIDSLMAAREKMAAGASLVQIYSGFIFKGPRLIKDI 332
BLAST of CK739685 vs. ExPASy Swiss-Prot
Match: PYRD_PROMH (Dihydroorotate dehydrogenase OS=Proteus mirabilis (strain HI4320) GN=pyrD PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 1.091e-13 Identity = 45/118 (38.14%), Postives = 65/118 (55.08%), Query Frame = 1 Query: 1 VKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSNNPVAKETXXXXXXXXXXXXNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPALIPQI 354 VKIAPDL+ E+L +A V +DG+I +NTT+ + VS E I++++ +G +P+IG GGI S A K+ AGA+L+Q+Y+ F Y GPALI I Sbjct: 216 VKIAPDLTHEELIQVADSLVRHHIDGVIATNTTLDK-SLVSGLDHCNEAGGLSGRPVQSKSTQIIRQLNEELKGALPIIGVGGIDSLTAAREKMDAGASLIQVYSGFIYHGPALIKSI 332
BLAST of CK739685 vs. ExPASy Swiss-Prot
Match: PYRD_NITEU (Dihydroorotate dehydrogenase OS=Nitrosomonas europaea GN=pyrD PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 1.091e-13 Identity = 42/115 (36.52%), Postives = 64/115 (55.65%), Query Frame = 1 Query: 1 VKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSNNPVAKETXXXXXXXXXXXXNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPALI 345 +KIAPDL E + IA++ + R+D +I +NTT +R + V + P E +++++ + IP+IG GGI S DA KI AGA+LVQ+Y+ Y GP L+ Sbjct: 214 IKIAPDLESEQITVIASLLMKHRMDAVIATNTTTAR-EGVEHLPRGNEKGGLSGAPLTERSTTVIRQLANHLQHAIPIIGAGGIMSARDAQLKIEAGASLVQIYSGLIYRGPDLV 327
BLAST of CK739685 vs. ExPASy Swiss-Prot
Match: PYRD_METPP (Dihydroorotate dehydrogenase OS=Methylibium petroleiphilum (strain PM1) GN=pyrD PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 1.091e-13 Identity = 48/127 (37.80%), Postives = 65/127 (51.18%), Query Frame = 1 Query: 1 VKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSNNPVAKETXXXXXXXXXXXXNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPALIPQIKAELAECLK 381 VKIAPDL + ++ IAA +DG+I +NTT+SR D V A E N ++ ++ P+IG GG+ SG DA K GA +VQ+YT Y GPAL+ +E A LK Sbjct: 222 VKIAPDLDEAQVDVIAATLKKNAVDGVIATNTTLSR-DAVRGQAHATEVGGLSGRPVFEASNRVVGQLRAALGAGYPIIGVGGVMSGADARAKRDVGADVVQIYTGLIYRGPALV----SEAARALK 343
BLAST of CK739685 vs. ExPASy Swiss-Prot
Match: PYRD_BORPD (Dihydroorotate dehydrogenase OS=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) GN=pyrD PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 1.091e-13 Identity = 50/130 (38.46%), Postives = 65/130 (50.00%), Query Frame = 1 Query: 1 VKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSNNPVAKETXXXXXXXXXXXXNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPALIPQIKAELAECLKRDG 390 VKIAPDLS+ ++ IA + +DG+I +NTT+SR D V+ P A E ++ + +IG GGI SG A KI AGA VQLYT Y GPAL+ E A +K G Sbjct: 224 VKIAPDLSEAQIDAIADILPRYGVDGVIATNTTLSR-DAVAGQPHANEAGGLSGAPVHALSLAVIARLRQRMGPGAAIIGVGGILSGRQAREKIDAGANAVQLYTGLIYRGPALV----GECASAIKAAG 348
BLAST of CK739685 vs. ExPASy Swiss-Prot
Match: PYRD_BARBK (Dihydroorotate dehydrogenase OS=Bartonella bacilliformis (strain ATCC 35685 / KC583) GN=pyrD PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 1.091e-13 Identity = 43/134 (32.09%), Postives = 70/134 (52.24%), Query Frame = 1 Query: 1 VKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSNNPVAKETXXXXXXXXXXXXNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPALIPQIKAELAECLKRDGFKSI 402 +K+APDL++++L+D+AA DGL++SNTT+ R + + E +L +M I +IG GG+ + A KI+AGA LVQ Y+ Y GP L I ++ + +++DG +I Sbjct: 212 LKLAPDLTEQELDDVAAELSLSDFDGLVVSNTTLFRQG-LKKSAFMNEGGGLSGRPLFERSTIVLAKMRQKLGKDIAIIGVGGVWDAQTALEKIKAGADLVQFYSGMVYEGPDLAKNITKDVLQMMQQDGVDTI 344 The following BLAST results are available for this feature:
BLAST of CK739685 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 388
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Sequences
The
following sequences are available for this feature:
EST sequence >CK739685 ID=CK739685; Name=CK739685; organism=Citrus sinensis; type=EST; length=488bpback to top |