CK739685
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK739685 vs. ExPASy Swiss-Prot
Match: PYRD_XYLFA (Dihydroorotate dehydrogenase OS=Xylella fastidiosa GN=pyrD PE=3 SV=2) HSP 1 Score: 75.485 bits (184), Expect = 1.425e-13 Identity = 46/128 (35.94%), Postives = 67/128 (52.34%), Query Frame = 1 Query: 1 VKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSNNPVAKETXXXXXXXXXXXXNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPALIPQIKAELAECLKR 384 +K+APDLS D++ A V + +DG+I +NTT++RP + + +A ET +L+ + I LIG GGI G DA K+ AGA LVQ YT + GP L+ E E ++R Sbjct: 216 IKMAPDLSDSDIDAAARVLNEMSVDGVIATNTTVTRP-LLRQHRLASETGGLSGAPLLGQSTLVLRRLRTHLPETIALIGVGGICCGADAVAKMAAGANLVQCYTGLIFKGPQLV----GECVEAIRR 338
BLAST of CK739685 vs. ExPASy Swiss-Prot
Match: PYRD_BUCAP (Dihydroorotate dehydrogenase OS=Buchnera aphidicola subsp. Schizaphis graminum GN=pyrD PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 1.425e-13 Identity = 43/120 (35.83%), Postives = 66/120 (55.00%), Query Frame = 1 Query: 1 VKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPD--PVSNNPVAKETXXXXXXXXXXXXNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPALIPQI 354 +KI+PDLSK++L I+ + ++DG+I +NTT+ + NN KE N+++ +Y + KIP+IG GGI+S A KI GA L+Q+Y+ Y GP I +I Sbjct: 216 IKISPDLSKKELIHISNKLIHYKIDGVIATNTTLDHSSIPKIKNN---KEEGGLSGLPLQKKSNDVISILYKNLKRKIPIIGVGGINSINSAREKIMCGANLIQVYSGLIYHGPNFIREI 332
BLAST of CK739685 vs. ExPASy Swiss-Prot
Match: PYRD_PSEPF (Dihydroorotate dehydrogenase OS=Pseudomonas fluorescens (strain Pf0-1) GN=pyrD PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 1.861e-13 Identity = 42/115 (36.52%), Postives = 62/115 (53.91%), Query Frame = 1 Query: 1 VKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSNNPVAKETXXXXXXXXXXXXNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPALI 345 +KIAPD++ E+ +A + +D +I +NTT+SR V E + +K + GK+P+I GGI+ G+ A KI AGA+LVQ+Y+ F Y GPALI Sbjct: 215 IKIAPDMTDEETAQVAQALIETGMDAVIATNTTLSRVG-VEGMEHGDEAGGLSGAPVREKSTHTVKVLASELGGKLPIIAAGGITEGKHAAEKIAAGASLVQIYSGFIYKGPALI 328
BLAST of CK739685 vs. ExPASy Swiss-Prot
Match: PYRD_KLEP3 (Dihydroorotate dehydrogenase OS=Klebsiella pneumoniae (strain 342) GN=pyrD PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 1.861e-13 Identity = 46/118 (38.98%), Postives = 63/118 (53.39%), Query Frame = 1 Query: 1 VKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSNNPVAKETXXXXXXXXXXXXNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPALIPQI 354 VKIAPDL E+L +A V +DG+I +NTT+ R V ET I++ + G++P+IG GGI S A KI AGA+LVQ+Y+ F + GP LI +I Sbjct: 216 VKIAPDLLPEELIQVADSLVRHNIDGVIATNTTLDR-SLVQGMKHCDETGGLSGRPLQLKSTEIIRMLSAELNGRLPIIGVGGIDSVIAAREKIAAGASLVQIYSGFIFKGPPLIKEI 332
BLAST of CK739685 vs. ExPASy Swiss-Prot
Match: PYRD_CITK8 (Dihydroorotate dehydrogenase OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=pyrD PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 1.861e-13 Identity = 45/118 (38.14%), Postives = 65/118 (55.08%), Query Frame = 1 Query: 1 VKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSNNPVAKETXXXXXXXXXXXXNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPALIPQI 354 VKIAPDLS+++L +A V +DG+I +NTT+ R V ET I++ + + ++P+IG GGI S A K+ AGATLVQ+Y+ F + GP LI +I Sbjct: 216 VKIAPDLSEDELIQVADSLVRHNIDGVIATNTTLDR-SLVQGMKNCDETGGLSGRPLQLKSTEIIRRLSQELKEQLPIIGVGGIDSVIAAREKMAAGATLVQIYSGFIFKGPQLIKEI 332
BLAST of CK739685 vs. ExPASy Swiss-Prot
Match: PYRD_BAUCH (Dihydroorotate dehydrogenase OS=Baumannia cicadellinicola subsp. Homalodisca coagulata GN=pyrD PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 1.861e-13 Identity = 42/122 (34.43%), Postives = 71/122 (58.20%), Query Frame = 1 Query: 1 VKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSNNPVAKETXXXXXXXXXXXXNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPALIPQIKAEL 366 VKI PD+++ +L +A + V ++DG+I +NTT SR + V + ++ +++ + +GK+P+IG GGI S A K+ AGATL+Q+Y++F + GP LI I ++L Sbjct: 216 VKITPDMTESELIQMADLLVQHKIDGIIATNTTTSR-ELVHGLDHSSQSGGLSGRPLQLMSTEVIRILSSKLQGKLPIIGVGGIDSLISAREKMAAGATLIQIYSSFIFHGPRLIKDIISDL 336
BLAST of CK739685 vs. ExPASy Swiss-Prot
Match: PYRD_THET2 (Dihydroorotate dehydrogenase OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=pyrD PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 2.431e-13 Identity = 43/136 (31.62%), Postives = 74/136 (54.41%), Query Frame = 1 Query: 1 VKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSNNPVAKETXXXXXXXXXXXXNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPALIPQIKAELAECLKRDGFKSIIE 408 +K+APDLS + L+++ A+ RL GL+ NTT++R S P+A+E +L+ + G + L+ GG+ + D + +++AGA+LVQ+YT F YGGP ++ L ++ +G S+ E Sbjct: 210 LKVAPDLSPKALDEVLALTKKHRLQGLVAVNTTLAREGLKS--PLAREAGGLSGRPLKRRALEVLRHLAEGAEG-LALVSVGGVETPLDLWERLKAGASLVQVYTGFVYGGPLFPRRLLLGLLRLMEAEGVSSLGE 342
BLAST of CK739685 vs. ExPASy Swiss-Prot
Match: PYRD_KLEP7 (Dihydroorotate dehydrogenase OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=pyrD PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 2.431e-13 Identity = 45/118 (38.14%), Postives = 63/118 (53.39%), Query Frame = 1 Query: 1 VKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSNNPVAKETXXXXXXXXXXXXNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPALIPQI 354 +KIAPDL E+L +A V +DG+I +NTT+ R V ET I++ + G++P+IG GGI S A KI AGA+LVQ+Y+ F + GP LI +I Sbjct: 216 IKIAPDLLPEELIQVADSLVRHNIDGVIATNTTLDR-SLVQGMKHCDETGGLSGRPLQLKSTEIIRMLSAELNGRLPIIGVGGIDSVIAAREKIAAGASLVQIYSGFIFKGPPLIKEI 332
BLAST of CK739685 vs. ExPASy Swiss-Prot
Match: PYRD_CHLSY (Dihydroorotate dehydrogenase OS=Chloroflexus aurantiacus (strain ATCC 29364 / DSM 637 / Y-400-fl) GN=pyrD PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 2.431e-13 Identity = 42/115 (36.52%), Postives = 64/115 (55.65%), Query Frame = 1 Query: 1 VKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSNNP-VAKETXXXXXXXXXXXXNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPAL 342 VKIAPDLS +E++ V + G+I +NTTISR +P +A E ++++ + LT ++P+IG GGI + +D R + AGA+L+Q+YT Y GP L Sbjct: 233 VKIAPDLSDTAIEEVLTVCADHGVAGIIATNTTISREGLTGVDPRLAAEAGGLSGRPLIARALHVVRLIARLTGNRLPIIGVGGIHTPDDGLRMLEAGASLIQIYTGLVYYGPLL 347
BLAST of CK739685 vs. ExPASy Swiss-Prot
Match: PYRD_CHLAA (Dihydroorotate dehydrogenase OS=Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl) GN=pyrD PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 2.431e-13 Identity = 42/115 (36.52%), Postives = 64/115 (55.65%), Query Frame = 1 Query: 1 VKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSNNP-VAKETXXXXXXXXXXXXNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPAL 342 VKIAPDLS +E++ V + G+I +NTTISR +P +A E ++++ + LT ++P+IG GGI + +D R + AGA+L+Q+YT Y GP L Sbjct: 233 VKIAPDLSDTAIEEVLTVCADHGVAGIIATNTTISREGLTGVDPRLAAEAGGLSGRPLIARALHVVRLIARLTGNRLPIIGVGGIHTPDDGLRMLEAGASLIQIYTGLVYYGPLL 347 The following BLAST results are available for this feature:
BLAST of CK739685 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 388
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Sequences
The
following sequences are available for this feature:
EST sequence >CK739685 ID=CK739685; Name=CK739685; organism=Citrus sinensis; type=EST; length=488bpback to top |