CK739685
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK739685 vs. ExPASy Swiss-Prot
Match: PYRD_PHOLL (Dihydroorotate dehydrogenase OS=Photorhabdus luminescens subsp. laumondii GN=pyrD PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 3.174e-13 Identity = 44/118 (37.29%), Postives = 64/118 (54.24%), Query Frame = 1 Query: 1 VKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSNNPVAKETXXXXXXXXXXXXNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPALIPQI 354 VKIAPDLS+E+L IA + +DG I +NTT+ + V ++ +++++ R KIP+IG GGI S A KI AGA+L+Q+++ F Y GP LI I Sbjct: 216 VKIAPDLSEEELIQIADSLIRHNIDGAIATNTTLDKR-LVEGLNYCQQAGGLSGRPVQLRSTEVIRQLSQELRDKIPIIGVGGIDSLTAAREKIAAGASLIQIFSGFIYHGPKLIKDI 332
BLAST of CK739685 vs. ExPASy Swiss-Prot
Match: PYRD_ERWCT (Dihydroorotate dehydrogenase OS=Erwinia carotovora subsp. atroseptica GN=pyrD PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 3.174e-13 Identity = 46/118 (38.98%), Postives = 64/118 (54.24%), Query Frame = 1 Query: 1 VKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSNNPVAKETXXXXXXXXXXXXNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPALIPQI 354 VKIAPDLS+E+L IA V +DG+I +NTT+ R N +T I++ + G++P+IG GGI S A K+ AGA+LVQ+Y+ F + GP LI I Sbjct: 216 VKIAPDLSEEELIQIADSLVRYNIDGVIATNTTLDRKLIQGLNHCG-QTGGLSGRPLQTSSTEIIRRLSQELAGRLPIIGVGGIDSLVAAREKMDAGASLVQIYSGFIFHGPRLIKDI 332
BLAST of CK739685 vs. ExPASy Swiss-Prot
Match: PYRD_YERE8 (Dihydroorotate dehydrogenase OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=pyrD PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 4.146e-13 Identity = 41/118 (34.75%), Postives = 65/118 (55.08%), Query Frame = 1 Query: 1 VKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSNNPVAKETXXXXXXXXXXXXNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPALIPQI 354 VKIAPDL++E+L IA V +DG+I +NTT+ R + ++ +++ + +G++P+IG GGI S A K+ AGA+L+Q+Y+ F + GP LI I Sbjct: 216 VKIAPDLTEEELIQIADSLVRHNIDGVIATNTTLDR-SLIQGLNYCEQAGGLSGRPLQLRSTEVIRRLSQELQGRLPIIGVGGIDSVTAAREKMAAGASLIQIYSGFIFRGPGLIKNI 332
BLAST of CK739685 vs. ExPASy Swiss-Prot
Match: PYRD_PSEA6 (Dihydroorotate dehydrogenase OS=Pseudoalteromonas atlantica (strain T6c / BAA-1087) GN=pyrD PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 4.146e-13 Identity = 41/118 (34.75%), Postives = 62/118 (52.54%), Query Frame = 1 Query: 1 VKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSNNPVAKETXXXXXXXXXXXXNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPALIPQI 354 +KIAPDL +L+ + + + +DG+I +NTT+ R D V A+E I+ + G +P+IG GGI S A +I AG+ L+Q+Y+A Y GP LI +I Sbjct: 215 IKIAPDLEDSELDSMVDSFLTVGIDGVIATNTTLDR-DRVKGQEHAEEAGGLSGSVLTDKSQQIVSSLCTKLAGNVPVIGVGGIDSPHAAKARIEAGSPLIQVYSALIYQGPKLIKEI 331
BLAST of CK739685 vs. ExPASy Swiss-Prot
Match: PYRD_PECCP (Dihydroorotate dehydrogenase OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=pyrD PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 4.146e-13 Identity = 46/118 (38.98%), Postives = 64/118 (54.24%), Query Frame = 1 Query: 1 VKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSNNPVAKETXXXXXXXXXXXXNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPALIPQI 354 VKIAPDLS+E+L IA V +DG+I +NTT+ R N +T I++ + G++P+IG GGI S A K+ AGA+LVQ+Y+ F + GP LI I Sbjct: 216 VKIAPDLSEEELIQIADSLVRHNIDGVIATNTTLDRKLIQGLNHCG-QTGGLSGRPLQTSSTEIIRRLSQELAGRLPIIGVGGIDSLVAAREKMAAGASLVQIYSGFIFHGPRLIKDI 332
BLAST of CK739685 vs. ExPASy Swiss-Prot
Match: PYRD_PSYCK (Dihydroorotate dehydrogenase OS=Psychrobacter cryohalolentis (strain K5) GN=pyrD PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 5.415e-13 Identity = 43/115 (37.39%), Postives = 61/115 (53.04%), Query Frame = 1 Query: 1 VKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSNNPVAKETXXXXXXXXXXXXNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPALI 345 +K+APDL ++ I+ + +DGLI +NTT+SR V + P + IL++ GK+ LIG GGI SG A +KI AGA +VQLY+ Y GP L+ Sbjct: 215 LKVAPDLDPIQVDYISQQLLDFEIDGLIATNTTLSRVG-VEDLPDGDQAGGLSGRPVSHISTQILQQFSDQLDGKVALIGVGGIDSGAKAVKKIEAGADMVQLYSGLIYKGPGLV 328
BLAST of CK739685 vs. ExPASy Swiss-Prot
Match: PYRD_PSYA2 (Dihydroorotate dehydrogenase OS=Psychrobacter arcticus (strain DSM 17307 / 273-4) GN=pyrD PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 5.415e-13 Identity = 43/115 (37.39%), Postives = 61/115 (53.04%), Query Frame = 1 Query: 1 VKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSNNPVAKETXXXXXXXXXXXXNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPALI 345 +K+APDL ++ I+ + +DGLI +NTT+SR V + P + IL++ GK+ LIG GGI SG A +KI AGA +VQLY+ Y GP L+ Sbjct: 215 LKVAPDLDPLQVDYISQQLLDFEIDGLIATNTTLSRVG-VEDLPDGDQAGGLSGRPVSHISTQILQQFSDQLDGKVALIGVGGIDSGAKAVKKIEAGADMVQLYSGLIYKGPGLV 328
BLAST of CK739685 vs. ExPASy Swiss-Prot
Match: PYRD_AZOVD (Dihydroorotate dehydrogenase OS=Azotobacter vinelandii (strain DJ / ATCC BAA-1303) GN=pyrD PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 5.415e-13 Identity = 42/123 (34.15%), Postives = 65/123 (52.85%), Query Frame = 1 Query: 1 VKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSNNPVAKETXXXXXXXXXXXXNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPALIPQIKAELA 369 +KIAPD+S E+ +A + +D +I +NTT+ R + V A E + ++ + G++P++ GGI+ G A KI AGA+LVQ+YT F Y GPALI + +A Sbjct: 215 IKIAPDMSDEETAQVARALLDTGMDAVIATNTTLGR-EGVEGLAHAGEAGGLSGAPVREKSTHAVRVLAGELGGRLPIVAVGGITEGRHAAEKIAAGASLVQIYTGFVYKGPALIREAVEAIA 336
BLAST of CK739685 vs. ExPASy Swiss-Prot
Match: PYRD_YERPY (Dihydroorotate dehydrogenase OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=pyrD PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 7.072e-13 Identity = 41/118 (34.75%), Postives = 64/118 (54.24%), Query Frame = 1 Query: 1 VKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSNNPVAKETXXXXXXXXXXXXNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPALIPQI 354 VKIAPDL++E+L IA V +DG+I +NTT+ R + ++ ++ + +G++P+IG GGI S A K+ AGA+L+Q+Y+ F + GP LI I Sbjct: 216 VKIAPDLTEEELIQIADSLVRHNIDGVIATNTTLDR-SLIQGLNYCEQAGGLSGRPLQLRSTEVIHRLSQELKGRLPIIGVGGIDSVTAAREKMAAGASLIQIYSGFIFRGPGLIKNI 332
BLAST of CK739685 vs. ExPASy Swiss-Prot
Match: PYRD_YERPS (Dihydroorotate dehydrogenase OS=Yersinia pseudotuberculosis GN=pyrD PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 7.072e-13 Identity = 41/118 (34.75%), Postives = 64/118 (54.24%), Query Frame = 1 Query: 1 VKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSNNPVAKETXXXXXXXXXXXXNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPALIPQI 354 VKIAPDL++E+L IA V +DG+I +NTT+ R + ++ ++ + +G++P+IG GGI S A K+ AGA+L+Q+Y+ F + GP LI I Sbjct: 216 VKIAPDLTEEELIQIADSLVRHNIDGVIATNTTLDR-SLIQGLNYCEQAGGLSGRPLQLRSTEVIHRLSQELKGRLPIIGVGGIDSVTAAREKMAAGASLIQIYSGFIFRGPGLIKNI 332 The following BLAST results are available for this feature:
BLAST of CK739685 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 388
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Sequences
The
following sequences are available for this feature:
EST sequence >CK739685 ID=CK739685; Name=CK739685; organism=Citrus sinensis; type=EST; length=488bpback to top |