CK739685
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK739685 vs. ExPASy Swiss-Prot
Match: PYRD2_KLUMA (Dihydroorotate dehydrogenase, mitochondrial OS=Kluyveromyces marxianus GN=URA9 PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 6.381e-22 Identity = 59/146 (40.41%), Postives = 87/146 (59.59%), Query Frame = 1 Query: 1 VKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPV--SNNPVAKETXXXXXXXXXXXXNNILKEMYLLTRGK-IPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPALIPQIKAELAECLKRDGFKSIIEAVGADYR 429 VK+APDL +E+++ IA A ++DG+I+SNTTI RP + + + + LK M T+G + L+GCGGISSG DA +AGAT+V+LYT +AY GP LI ++K E+ E LKR+ K+ + +G D + Sbjct: 302 VKVAPDLEEEEIKAIAEAAKKSKVDGIIVSNTTIQRPASLITEDKNLVAQAGGLSGKPLKPLSLKALKTMAHYTKGSGLVLVGCGGISSGADAIEFAKAGATMVELYTCYAYRGPGLIARVKDEITEQLKREN-KTWSQIIGEDVK 446
BLAST of CK739685 vs. ExPASy Swiss-Prot
Match: PYRD_THEFY (Dihydroorotate dehydrogenase OS=Thermobifida fusca (strain YX) GN=pyrD PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 8.334e-22 Identity = 62/144 (43.06%), Postives = 84/144 (58.33%), Query Frame = 1 Query: 1 VKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSNNP---VAKETXXXXXXXXXXXXNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPALIPQIKAELAECLKRDGFKSIIEAVGAD 423 VKIAPDL+ ED++ +A +AV L LDG+I +NTT+SR D ++ +P A +L+ + ++ LI GGI + EDA+ +IRAGATLVQ YT YGGP +I +A +RDGF SI EAVG D Sbjct: 223 VKIAPDLADEDIDAVADLAVELGLDGIIATNTTVSR-DGLATDPEEVAALGAGGLSGAPLKERALQVLRRLRARVGDRLVLIAVGGIETPEDAWARIRAGATLVQGYTGLIYGGPLWPRRIHRGVAALARRDGFASIAEAVGVD 365
BLAST of CK739685 vs. ExPASy Swiss-Prot
Match: PYRD_HALSA (Dihydroorotate dehydrogenase OS=Halobacterium salinarium GN=pyrD PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 1.088e-21 Identity = 54/141 (38.30%), Postives = 83/141 (58.87%), Query Frame = 1 Query: 1 VKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSNNPVAKETXXXXXXXXXXXXNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPALIPQIKAELAECLKRDGFKSIIEAVGAD 423 VK++PDL ++ + D +A L LDG++ +NTT RP+ +S+ ++ + ++ R P++G GG+++ EDAY KIRAGA++VQLYTA Y GP + +I L L+RDGF S+ +AVGAD Sbjct: 211 VKLSPDLHQDAVADAVELANDLGLDGIVATNTTTERPESLSHPHAGEQGGLSGAPIRERATEQV---RFVAERTDQPVVGVGGVATAEDAYEKIRAGASVVQLYTALVYEGPWVAKRINEGLVSLLERDGFDSVEDAVGAD 348
BLAST of CK739685 vs. ExPASy Swiss-Prot
Match: PYRD_HALS3 (Dihydroorotate dehydrogenase OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=pyrD PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 1.088e-21 Identity = 54/141 (38.30%), Postives = 83/141 (58.87%), Query Frame = 1 Query: 1 VKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSNNPVAKETXXXXXXXXXXXXNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPALIPQIKAELAECLKRDGFKSIIEAVGAD 423 VK++PDL ++ + D +A L LDG++ +NTT RP+ +S+ ++ + ++ R P++G GG+++ EDAY KIRAGA++VQLYTA Y GP + +I L L+RDGF S+ +AVGAD Sbjct: 211 VKLSPDLHQDAVADAVELANDLGLDGIVATNTTTERPESLSHPHAGEQGGLSGAPIRERATEQV---RFVAERTDQPVVGVGGVATAEDAYEKIRAGASVVQLYTALVYEGPWVAKRINEGLVSLLERDGFDSVEDAVGAD 348
BLAST of CK739685 vs. ExPASy Swiss-Prot
Match: PYRD_TRIEI (Dihydroorotate dehydrogenase OS=Trichodesmium erythraeum (strain IMS101) GN=pyrD PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 1.857e-21 Identity = 56/145 (38.62%), Postives = 80/145 (55.17%), Query Frame = 1 Query: 1 VKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPD------PVSNNPVAKETXXXXXXXXXXXXNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPALIPQIKAELAECLKRDGFKSIIEAVG 417 VKIAPDL E + I + ++ G+I +NTTI+R P + P+ +E I+K ++ T+GK+P+IG GGI + EDA+ KI AGA+L+Q+YT Y GP ++ QI L + L G SI EAVG Sbjct: 230 VKIAPDLENEAIAAIIDLIKEYKISGIIATNTTINREKLTTKILPATGKPIIEEAGGISGKPLTKRSTEIIKFIWQETKGKLPIIGVGGIFTSEDAWNKITAGASLIQIYTGLVYQGPGIVKQILQGLLKKLDEHGLNSISEAVG 374
BLAST of CK739685 vs. ExPASy Swiss-Prot
Match: PYRD_DEIDV (Dihydroorotate dehydrogenase OS=Deinococcus deserti (strain VCD115 / DSM 17065 / LMG 22923) GN=pyrD PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 1.857e-21 Identity = 56/141 (39.72%), Postives = 82/141 (58.16%), Query Frame = 1 Query: 1 VKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSNNPVAKETXXXXXXXXXXXXNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPALIPQIKAELAECLKRDGFKSIIEAVGAD 423 VK+APDL D E A+ + GLI+SNTT+SR + ++ ++++ Y LTRG +P++G GGI S +DAY KIRAGA+LV++Y++ Y GP L +I L + L+RDG + +AVGAD Sbjct: 221 VKLAPDLHPADFEASVQGALNAGVQGLIVSNTTLSRDGLTHAH--REQAGGLSGRPLTGRSTALVQDAYRLTRGAVPVVGVGGIFSADDAYAKIRAGASLVEVYSSLIYEGPGLPARIHRGLGQLLERDGISHVRDAVGAD 359
BLAST of CK739685 vs. ExPASy Swiss-Prot
Match: PYRD_AGRRK (Dihydroorotate dehydrogenase OS=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) GN=pyrD PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 1.857e-21 Identity = 60/136 (44.12%), Postives = 81/136 (59.56%), Query Frame = 1 Query: 1 VKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSNNPVAKETXXXXXXXXXXXXNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPALIPQIKAELAECLKRDGFKSIIE 408 +KIAPDL++E ++DIAA +A LDGLI+SNTT+SR D + + AKE +L +M +P+IG GG+SS E A KIRAGA LVQLY+ Y GP L ++ A L++ L R+ SI E Sbjct: 214 LKIAPDLTEEGMDDIAAEVLAHALDGLIVSNTTLSR-DGLKDQVQAKEAGGLSGKPVFERSTVVLAKMRRRVGAALPIIGVGGVSSAETALEKIRAGADLVQLYSCMVYEGPGLPGRVVAGLSKLLDRERVASIRE 348
BLAST of CK739685 vs. ExPASy Swiss-Prot
Match: PYRD_ROSS1 (Dihydroorotate dehydrogenase OS=Roseiflexus sp. (strain RS-1) GN=pyrD PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 2.425e-21 Identity = 56/139 (40.29%), Postives = 79/139 (56.83%), Query Frame = 1 Query: 1 VKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSNNPVAKETXXXXXXXXXXXXNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPALIPQIKAELAECLKRDGFKSIIEAVG 417 +K++PD + + LE + + I +NTT++R D S +A ET ++ +Y LT G P+IG GGI++ EDAY+ IRAGA L+Q+YT Y GPA+ IK LA L+RDGF S+ EAVG Sbjct: 220 LKVSPDETPDQLEAVVRAGCDAGIAAFIATNTTLARDDLHSR--LAIETGGLSGRPLTQRARQVIGAIYRLTHGAPPVIGVGGIATAEDAYQHIRAGARLIQIYTGMVYAGPAIARDIKQGLARRLRRDGFTSLEEAVG 356
BLAST of CK739685 vs. ExPASy Swiss-Prot
Match: PYRD_RHIL3 (Dihydroorotate dehydrogenase OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=pyrD PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 2.425e-21 Identity = 60/136 (44.12%), Postives = 80/136 (58.82%), Query Frame = 1 Query: 1 VKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSNNPVAKETXXXXXXXXXXXXNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPALIPQIKAELAECLKRDGFKSIIE 408 +KIAPDL++E ++DIAA A++ LDGLI+SNTT+SR D + + AKET +L M +P+IG GG+SS E A KIRAGA LVQLY+ Y GP L + L++ L R+ SI E Sbjct: 214 LKIAPDLTEEGMDDIAAEALSHALDGLIVSNTTLSR-DGLKDQRQAKETGGLSGVPLFEKSTAVLARMRKRVGPDLPIIGVGGVSSAETALEKIRAGADLVQLYSCMVYEGPGLAGDVVRGLSKLLDREKAASIRE 348
BLAST of CK739685 vs. ExPASy Swiss-Prot
Match: PYRD_BRUSU (Dihydroorotate dehydrogenase OS=Brucella suis GN=pyrD PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 3.167e-21 Identity = 61/136 (44.85%), Postives = 78/136 (57.35%), Query Frame = 1 Query: 1 VKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSNNPVAKETXXXXXXXXXXXXNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPALIPQIKAELAECLKRDGFKSIIE 408 +KIAPDL+ E+L+DIAA A A +LDG+I+SNTT+SR + N + ET +L M +PLIG GGI S E A KI+AGA LVQLYT Y GP L +I L+ +K +G SI E Sbjct: 214 LKIAPDLTDEELDDIAAEADAQKLDGIIVSNTTLSRSG-LKNPENSNETGGLSGAPLFERSTVVLARMRERVGPDMPLIGVGGIDSAETALAKIKAGADLVQLYTGLIYRGPGLPGEILRGLSTAIKHEGVSSIAE 348 The following BLAST results are available for this feature:
BLAST of CK739685 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 388
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Sequences
The
following sequences are available for this feature:
EST sequence >CK739685 ID=CK739685; Name=CK739685; organism=Citrus sinensis; type=EST; length=488bpback to top |