CK739685
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK739685 vs. ExPASy Swiss-Prot
Match: PYRD_BRUSI (Dihydroorotate dehydrogenase OS=Brucella suis (strain ATCC 23445 / NCTC 10510) GN=pyrD PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 3.167e-21 Identity = 61/136 (44.85%), Postives = 78/136 (57.35%), Query Frame = 1 Query: 1 VKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSNNPVAKETXXXXXXXXXXXXNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPALIPQIKAELAECLKRDGFKSIIE 408 +KIAPDL+ E+L+DIAA A A +LDG+I+SNTT+SR + N + ET +L M +PLIG GGI S E A KI+AGA LVQLYT Y GP L +I L+ +K +G SI E Sbjct: 214 LKIAPDLTDEELDDIAAEADAQKLDGIIVSNTTLSRSG-LKNPENSNETGGLSGAPLFERSTVVLARMRERVGPDMPLIGVGGIDSAETALAKIKAGADLVQLYTGLIYRGPGLPGEILRGLSTAIKHEGVSSIAE 348
BLAST of CK739685 vs. ExPASy Swiss-Prot
Match: PYRD_BRUO2 (Dihydroorotate dehydrogenase OS=Brucella ovis (strain ATCC 25840 / 63/290 / NCTC 10512) GN=pyrD PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 3.167e-21 Identity = 61/136 (44.85%), Postives = 78/136 (57.35%), Query Frame = 1 Query: 1 VKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSNNPVAKETXXXXXXXXXXXXNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPALIPQIKAELAECLKRDGFKSIIE 408 +KIAPDL+ E+L+DIAA A A +LDG+I+SNTT+SR + N + ET +L M +PLIG GGI S E A KI+AGA LVQLYT Y GP L +I L+ +K +G SI E Sbjct: 214 LKIAPDLTDEELDDIAAEADAQKLDGIIVSNTTLSRSG-LKNPENSNETGGLSGAPLFERSTVVLARMRERVGPDMPLIGVGGIDSAETALAKIKAGADLVQLYTGLIYRGPGLPGEILRGLSTAIKHEGVSSIAE 348
BLAST of CK739685 vs. ExPASy Swiss-Prot
Match: PYRD_BRUC2 (Dihydroorotate dehydrogenase OS=Brucella canis (strain ATCC 23365 / NCTC 10854) GN=pyrD PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 3.167e-21 Identity = 61/136 (44.85%), Postives = 78/136 (57.35%), Query Frame = 1 Query: 1 VKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSNNPVAKETXXXXXXXXXXXXNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPALIPQIKAELAECLKRDGFKSIIE 408 +KIAPDL+ E+L+DIAA A A +LDG+I+SNTT+SR + N + ET +L M +PLIG GGI S E A KI+AGA LVQLYT Y GP L +I L+ +K +G SI E Sbjct: 214 LKIAPDLTDEELDDIAAEADAQKLDGIIVSNTTLSRSG-LKNPENSNETGGLSGAPLFERSTVVLARMRERVGPDMPLIGVGGIDSAETALAKIKAGADLVQLYTGLIYRGPGLPGEILRGLSTAIKHEGVSSIAE 348
BLAST of CK739685 vs. ExPASy Swiss-Prot
Match: PYRD_BRUAB (Dihydroorotate dehydrogenase OS=Brucella abortus GN=pyrD PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 3.167e-21 Identity = 61/136 (44.85%), Postives = 78/136 (57.35%), Query Frame = 1 Query: 1 VKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSNNPVAKETXXXXXXXXXXXXNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPALIPQIKAELAECLKRDGFKSIIE 408 +KIAPDL+ E+L+DIAA A A +LDG+I+SNTT+SR + N + ET +L M +PLIG GGI S E A KI+AGA LVQLYT Y GP L +I L+ +K +G SI E Sbjct: 214 LKIAPDLTDEELDDIAAEADAQKLDGIIVSNTTLSRSG-LKNPENSNETGGLSGAPLFERSTVVLARMRERVGPDMPLIGVGGIDSAETALAKIKAGADLVQLYTGLIYRGPGLPGEILRGLSTAIKHEGVSSIAE 348
BLAST of CK739685 vs. ExPASy Swiss-Prot
Match: PYRD_BRUA2 (Dihydroorotate dehydrogenase OS=Brucella abortus (strain 2308) GN=pyrD PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 3.167e-21 Identity = 61/136 (44.85%), Postives = 78/136 (57.35%), Query Frame = 1 Query: 1 VKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSNNPVAKETXXXXXXXXXXXXNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPALIPQIKAELAECLKRDGFKSIIE 408 +KIAPDL+ E+L+DIAA A A +LDG+I+SNTT+SR + N + ET +L M +PLIG GGI S E A KI+AGA LVQLYT Y GP L +I L+ +K +G SI E Sbjct: 214 LKIAPDLTDEELDDIAAEADAQKLDGIIVSNTTLSRSG-LKNPENSNETGGLSGAPLFERSTVVLARMRERVGPDMPLIGVGGIDSAETALAKIKAGADLVQLYTGLIYRGPGLPGEILRGLSTAIKHEGVSSIAE 348
BLAST of CK739685 vs. ExPASy Swiss-Prot
Match: PYRD_BRUA1 (Dihydroorotate dehydrogenase OS=Brucella abortus (strain S19) GN=pyrD PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 3.167e-21 Identity = 61/136 (44.85%), Postives = 78/136 (57.35%), Query Frame = 1 Query: 1 VKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSNNPVAKETXXXXXXXXXXXXNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPALIPQIKAELAECLKRDGFKSIIE 408 +KIAPDL+ E+L+DIAA A A +LDG+I+SNTT+SR + N + ET +L M +PLIG GGI S E A KI+AGA LVQLYT Y GP L +I L+ +K +G SI E Sbjct: 214 LKIAPDLTDEELDDIAAEADAQKLDGIIVSNTTLSRSG-LKNPENSNETGGLSGAPLFERSTVVLARMRERVGPDMPLIGVGGIDSAETALAKIKAGADLVQLYTGLIYRGPGLPGEILRGLSTAIKHEGVSSIAE 348
BLAST of CK739685 vs. ExPASy Swiss-Prot
Match: PYRD_SULDN (Dihydroorotate dehydrogenase OS=Sulfurimonas denitrificans (strain ATCC 33889 / DSM 1251) GN=pyrD PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 4.136e-21 Identity = 56/141 (39.72%), Postives = 79/141 (56.03%), Query Frame = 1 Query: 1 VKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSNNPVAKETXXXXXXXXXXXXNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPALIPQIKAELAECLKRDGFKSIIEAVGAD 423 +KIAPD+SKED + +AV DG+I +NTT+ + + + KE+Y GK LI GGISS ++ YR+I+AGA+LVQ+Y+ Y GP LI I EL E +K DG+ +I +A+GAD Sbjct: 214 LKIAPDMSKEDAVALTKLAVLKGADGIIATNTTVDYSLVKEPKSIGGLSGAVLKEKSFEIFEAVAKELY----GKTTLISVGGISSAKEVYRRIKAGASLVQIYSGLIYEGPDLIKNINNELTELIKADGYTNITQAIGAD 350
BLAST of CK739685 vs. ExPASy Swiss-Prot
Match: PYRD_AGRVS (Dihydroorotate dehydrogenase OS=Agrobacterium vitis (strain S4 / ATCC BAA-846) GN=pyrD PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 4.136e-21 Identity = 58/136 (42.65%), Postives = 79/136 (58.09%), Query Frame = 1 Query: 1 VKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSNNPVAKETXXXXXXXXXXXXNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPALIPQIKAELAECLKRDGFKSIIE 408 +KIAPDL++E ++DIA V +A LDGLI+SNTT+SR D +++ A E +L M +P+IG GG+SS + A KI+AGA LVQLY+ Y GP L I L++ L RDG SI + Sbjct: 215 LKIAPDLTEEGMDDIAEVVLARDLDGLIVSNTTLSR-DGLTDTRQAGEAGGLSGKPLFEKSTAVLARMRHRVGSALPIIGVGGVSSAQTALEKIKAGADLVQLYSCMVYEGPGLPAAIVKGLSQALDRDGIASIAQ 349
BLAST of CK739685 vs. ExPASy Swiss-Prot
Match: PYRD_STRAW (Dihydroorotate dehydrogenase OS=Streptomyces avermitilis GN=pyrD PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 5.402e-21 Identity = 60/145 (41.38%), Postives = 84/145 (57.93%), Query Frame = 1 Query: 1 VKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDP--VSNNPVAKETXXXXXXXXXXXXNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPALIPQIKAELAECLKRDGFKSIIEAVGADYR 429 VKIAPDL+ +D++ +A +AV L LDG+I +NTTI+R S + KET +L +Y +I L+G GGI + EDA+++I AGATLVQ Y+AF Y GP I LA L+ + ++ +AVGAD R Sbjct: 221 VKIAPDLADDDIDAVADLAVELGLDGIIATNTTIAREGLGLKSEPTLVKETGGLSGAPLKARSLEVLSRLYARVGDRITLVGVGGIENAEDAWQRILAGATLVQGYSAFIYEGPFWGRAIHKGLAARLRTSPYATLADAVGADVR 365
BLAST of CK739685 vs. ExPASy Swiss-Prot
Match: PYRD_RHILW (Dihydroorotate dehydrogenase OS=Rhizobium leguminosarum bv. trifolii (strain WSM2304) GN=pyrD PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 5.402e-21 Identity = 58/129 (44.96%), Postives = 77/129 (59.69%), Query Frame = 1 Query: 1 VKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSNNPVAKETXXXXXXXXXXXXNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPALIPQIKAELAECLKRD 387 +KIAPDL++E ++DIAA A+A LDGLI+SNTT+SR D + + AKET +L M +P+IG GG+SS E A KIRAGA LVQLY+ Y GP L I L++ + R+ Sbjct: 214 LKIAPDLTEEGMDDIAAEALAHALDGLIVSNTTLSR-DGLKDQRQAKETGGLSGVPLFEKSTAVLARMRKRVGAALPIIGVGGVSSAETALEKIRAGADLVQLYSCMVYEGPGLPGDIVRGLSKLMDRE 341 The following BLAST results are available for this feature:
BLAST of CK739685 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 388
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Sequences
The
following sequences are available for this feature:
EST sequence >CK739685 ID=CK739685; Name=CK739685; organism=Citrus sinensis; type=EST; length=488bpback to top |