CK739685
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK739685 vs. ExPASy Swiss-Prot
Match: PYRD_STRGG (Dihydroorotate dehydrogenase OS=Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350) GN=pyrD PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 3.502e-20 Identity = 58/145 (40.00%), Postives = 83/145 (57.24%), Query Frame = 1 Query: 1 VKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDP--VSNNPVAKETXXXXXXXXXXXXNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPALIPQIKAELAECLKRDGFKSIIEAVGADYR 429 VKIAPDL+ ED++ +A +AV L LDG+I +NTT++R S+ + E +L +Y +I L+G GG+ + EDA+++I AGATLVQ Y+AF Y GPA I LA L + ++ EAVGA+ R Sbjct: 221 VKIAPDLADEDVDAVADLAVELGLDGVIATNTTVAREGLGLKSHPDLVGEAGGLSGAPLKDRSLEVLSRLYARVGDRITLVGVGGVENAEDAWQRILAGATLVQGYSAFIYEGPAYARAIHQGLAARLAASPYATLAEAVGAETR 365
BLAST of CK739685 vs. ExPASy Swiss-Prot
Match: PYRD_RHIEC (Dihydroorotate dehydrogenase OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=pyrD PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 3.502e-20 Identity = 60/134 (44.78%), Postives = 77/134 (57.46%), Query Frame = 1 Query: 1 VKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSNNPVAKETXXXXXXXXXXXXNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPALIPQIKAELAECLKRDGFKSI 402 +KIAPDL++E ++DIAA A+A LDGLI+SNTT+SR D + + AKE +L M +P+IG GG+SS E A KIRAGA LVQLY+ Y GP L I L+ L R+ SI Sbjct: 214 LKIAPDLTEEGMDDIAAEALAHPLDGLIVSNTTLSR-DGLKDQRQAKEAGGLSGVPLFEKSTAVLARMRKRVGPDLPIIGVGGVSSAETALEKIRAGADLVQLYSCMVYEGPGLPGTIVRGLSALLDREKAGSI 346
BLAST of CK739685 vs. ExPASy Swiss-Prot
Match: PYRD_CORGL (Dihydroorotate dehydrogenase OS=Corynebacterium glutamicum GN=pyrD PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 3.502e-20 Identity = 58/143 (40.56%), Postives = 83/143 (58.04%), Query Frame = 1 Query: 1 VKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRP--DPVSNNPVAKETXXXXXXXXXXXXNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPALIPQIKAELAECLKRDGFKSIIEAVGAD 423 VKIAPDLS ED++ +A +AV L+L G++ +NTTISR + S A +LK +Y ++ LI GGIS+ E A+ +I +GATL+Q YT F YGGP I I +A+ LK G ++I +AVG++ Sbjct: 224 VKIAPDLSDEDIDAVADLAVELKLAGIVATNTTISREGLNTPSGEVEAMGAGGISGAPVAARSLEVLKRLYARVGKEMVLISVGGISTPEQAWERITSGATLLQGYTPFIYGGPDWIRDIHLGIAKQLKAHGLRNIADAVGSE 366
BLAST of CK739685 vs. ExPASy Swiss-Prot
Match: PYRD_COREF (Dihydroorotate dehydrogenase OS=Corynebacterium efficiens GN=pyrD PE=3 SV=2) HSP 1 Score: 97.4413 bits (241), Expect = 3.502e-20 Identity = 60/142 (42.25%), Postives = 81/142 (57.04%), Query Frame = 1 Query: 1 VKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSNNPVAKETXXXXXXXXXXXXN--NILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPALIPQIKAELAECLKRDGFKSIIEAVGA 420 VKIAPDLS ED++ +A +AV L L G++ +NTTISR V+ E +L+ ++ ++ LIG GGIS+ E A+ +I AGATL+Q YT F YGGP I I LAE +K G +I EAVG+ Sbjct: 227 VKIAPDLSDEDVDAVADLAVELGLAGIVATNTTISREGLVTPAHEVAEMGAGGISGPPVAERALEVLRRLHARVGDQLVLIGVGGISTPEQAWERIAAGATLLQGYTGFIYGGPDWIRDIHLGLAEQVKAHGLSNISEAVGS 368
BLAST of CK739685 vs. ExPASy Swiss-Prot
Match: PYRD_ACIF5 (Dihydroorotate dehydrogenase OS=Acidithiobacillus ferrooxidans (strain ATCC 53993) GN=pyrD PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 3.502e-20 Identity = 54/142 (38.03%), Postives = 83/142 (58.45%), Query Frame = 1 Query: 1 VKIAPDLSKEDLEDIAAVAV--ALRLDGLIISNTTISRPDPVSNNPVAKETXXXXXXXXXXXXNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPALIPQIKAELAECLKRDGFKSIIEAVGA 420 +KIAPDL +DL I ++A+ A ++G I +NTTI RP ++ P E+ N ++ ++Y T+G++P+IG GGI S DAY KI AGA+LVQ+Y+ + GP L+ +I EL +DG+ + A G+ Sbjct: 223 LKIAPDLDNDDLNAIGSLALGTAPLVNGFIATNTTIERP---ASQPGLSESGGLSGAPLLQQSNAVIAQLYRATQGQVPIIGVGGILSAADAYAKILAGASLVQVYSGLIFRGPGLVREILEELPGLWLKDGYPDLAHARGS 361
BLAST of CK739685 vs. ExPASy Swiss-Prot
Match: PYRD_ACIF2 (Dihydroorotate dehydrogenase OS=Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / NCIB 8455) GN=pyrD PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 3.502e-20 Identity = 54/142 (38.03%), Postives = 83/142 (58.45%), Query Frame = 1 Query: 1 VKIAPDLSKEDLEDIAAVAV--ALRLDGLIISNTTISRPDPVSNNPVAKETXXXXXXXXXXXXNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPALIPQIKAELAECLKRDGFKSIIEAVGA 420 +KIAPDL +DL I ++A+ A ++G I +NTTI RP ++ P E+ N ++ ++Y T+G++P+IG GGI S DAY KI AGA+LVQ+Y+ + GP L+ +I EL +DG+ + A G+ Sbjct: 223 LKIAPDLDNDDLNAIGSLALGTAPLVNGFIATNTTIERP---ASQPGLSESGGLSGAPLLQQSNAVIAQLYRATQGQVPIIGVGGILSAADAYAKILAGASLVQVYSGLIFRGPGLVREILEELPGLWLKDGYPDLAHARGS 361
BLAST of CK739685 vs. ExPASy Swiss-Prot
Match: PYRD_DELAS (Dihydroorotate dehydrogenase OS=Delftia acidovorans (strain DSM 14801 / SPH-1) GN=pyrD PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 5.973e-20 Identity = 53/124 (42.74%), Postives = 74/124 (59.68%), Query Frame = 1 Query: 1 VKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSNNPVAKETXXXXXXXXXXXXNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPALIPQIKAELAE 372 VKIAPDL +E + IAA +DG+I +NTTISR + V P A+ET N +++++ + P+IG GGI SGEDA KIRAGA +VQ+Y+ Y GPAL+P+ +A+ Sbjct: 224 VKIAPDLDEEQVGVIAATLQRHGMDGVIATNTTISR-EAVKGLPYAQETGGLSGAPVLEASNQVIRQLRSALGSRYPIIGVGGILSGEDAVSKIRAGADVVQIYSGLIYRGPALVPETARAIAQ 346
BLAST of CK739685 vs. ExPASy Swiss-Prot
Match: PYRD_SULNB (Dihydroorotate dehydrogenase OS=Sulfurovum sp. (strain NBC37-1) GN=pyrD PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 7.801e-20 Identity = 58/143 (40.56%), Postives = 80/143 (55.94%), Query Frame = 1 Query: 1 VKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSNNPVAKETXXXXXXXXXXXXNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPALIPQIKAELAECLKRDGFKSIIEAVGADYR 429 +KIAPD++ ED + AV G+I +NTTI S P AK+ + K + GK LI GGI S E+AYR+I+AGA+LVQ+Y+ Y GPALI +I L + LK+DG+ I EA+GAD++ Sbjct: 216 LKIAPDMTHEDAIALCNTAVDAGAAGIIATNTTID----YSLTPHAKDFGGISGALLTEKSYQLFKAIGKELYGKTLLISVGGIDSAEEAYRRIKAGASLVQVYSMLIYKGPALIREINEGLIKLLKKDGYTHISEAIGADWK 354
BLAST of CK739685 vs. ExPASy Swiss-Prot
Match: PYRD_NITSB (Dihydroorotate dehydrogenase OS=Nitratiruptor sp. (strain SB155-2) GN=pyrD PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 7.801e-20 Identity = 56/143 (39.16%), Postives = 77/143 (53.85%), Query Frame = 1 Query: 1 VKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSNNPVAKETXXXXXXXXXXXXNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPALIPQIKAELAECLKRDGFKSIIEAVGADYR 429 +KIAPD+S++ + + AV G+I +NT+I + + KE++ GK LI GGI S E+AYR+IR GATL+Q+YT+F YGGP L+ I L E LK+DGF I EA+G D R Sbjct: 213 LKIAPDMSEDQAVSLCSTAVDAGAAGVIATNTSIDYSLLRGAKDFGGVSGKVIKEKSFAIFKAVAKELF----GKTVLISVGGIDSAEEAYRRIRHGATLLQIYTSFIYGGPGLVKSINEGLIEYLKKDGFTHISEAIGIDIR 351
BLAST of CK739685 vs. ExPASy Swiss-Prot
Match: PYRD_NATPD (Dihydroorotate dehydrogenase OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=pyrD PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 7.801e-20 Identity = 55/141 (39.01%), Postives = 78/141 (55.32%), Query Frame = 1 Query: 1 VKIAPDLSKEDLEDIAAVAVALRLDGLIISNTTISRPDPVSNNPVAKETXXXXXXXXXXXXNNILKEMYLLTRGKIPLIGCGGISSGEDAYRKIRAGATLVQLYTAFAYGGPALIPQIKAELAECLKRDGFKSIIEAVGAD 423 VK++PDL+ +ED V L LDG+I +NTT RP + ++ A E +I++ ++ R P++G GGI E AY KIR GA++VQLYT Y GP + I L + L+RDGF S+ +AVG D Sbjct: 212 VKLSPDLTDAAIEDAIEVVEDLGLDGIIATNTTTKRPASLHSD-AADEEGGLSGAPITDESTDIVR--FIAKRTDKPIVGVGGIDDAESAYEKIRNGASVVQLYTGLVYEGPTIARDINRGLLKLLERDGFASVEDAVGVD 349 The following BLAST results are available for this feature:
BLAST of CK739685 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 388
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Sequences
The
following sequences are available for this feature:
EST sequence >CK739685 ID=CK739685; Name=CK739685; organism=Citrus sinensis; type=EST; length=488bpback to top |