CK739695
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK739695 vs. ExPASy Swiss-Prot
Match: CB23_TOBAC (Chlorophyll a-b binding protein 36, chloroplastic OS=Nicotiana tabacum GN=CAB36 PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 1.264e-16 Identity = 54/126 (42.86%), Postives = 67/126 (53.17%), Query Frame = 3 Query: 3 LGLGNWVHAQEWAAVPGGQATYLGNPVPWGTLPTILVIEFLSIAFVEHQRSMEKDPEKKKYPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 380 LG N +HAQ AV Q +G +IE + ++K YPGGAFDPLG + DP+ F E KVKEIKNGRLA+ + GF V Q+ G GP+ENL H+ADP NN Sbjct: 146 LGNPNLIHAQSILAVWASQVVLMG------------LIEGYRVGGGPLGEGLDKI-----YPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPIENLFDHVADPVANN 253
BLAST of CK739695 vs. ExPASy Swiss-Prot
Match: CB22_SOYBN (Chlorophyll a-b binding protein 2, chloroplastic OS=Glycine max GN=CAB2 PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 1.264e-16 Identity = 53/117 (45.30%), Postives = 67/117 (57.26%), Query Frame = 3 Query: 54 GQATYLGNP--VPWGTLPTILVIEFLSIAFVEHQR------SMEKDPEKKKYPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 380 G YLGNP + ++ I + + + VE R DP YPGG+FDPLG + DP+ E KVKE+KNGRLA+ + GF V Q+ G GPLENLA HLADP +NN Sbjct: 132 GGLDYLGNPSLIHAQSILAIWATQVILMGAVEGYRIAGGPLGEVTDPI---YPGGSFDPLGLADDPEALAELKVKELKNGRLAMFSMFGFFV-QAIVTGKGPLENLADHLADPVNNN 244
BLAST of CK739695 vs. ExPASy Swiss-Prot
Match: CB22_MAIZE (Chlorophyll a-b binding protein, chloroplastic OS=Zea mays PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 1.264e-16 Identity = 41/66 (62.12%), Postives = 50/66 (75.76%), Query Frame = 3 Query: 183 YPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 380 YPGG+FDPLG + DP+ F E KVKE+K GRLA+L+ GF V Q+ G GPLENLA H+ADP +NN Sbjct: 189 YPGGSFDPLGLADDPEAFGELKVKELKKGRLAMLSMFGFFV-QAIVTGKGPLENLADHIADPVNNN 253
BLAST of CK739695 vs. ExPASy Swiss-Prot
Match: CB22_HORVU (Chlorophyll a-b binding protein 2, chloroplastic OS=Hordeum vulgare GN=CAB2 PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 1.264e-16 Identity = 55/117 (47.01%), Postives = 67/117 (57.26%), Query Frame = 3 Query: 54 GQATYLGNP--VPWGTLPTILVIEFLSIAFVEHQR------SMEKDPEKKKYPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 380 G YLGNP V ++ I + + + VE R DP YPGG+FDPLG + D + F E KVKEIKNGRLA+ + GF V Q+ G GPLENLA HLADP +NN Sbjct: 140 GGLQYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVVDP---LYPGGSFDPLGLADDAEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPLENLADHLADPVNNN 252
BLAST of CK739695 vs. ExPASy Swiss-Prot
Match: CB2_DUNSA (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Dunaliella salina PE=2 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 1.651e-16 Identity = 52/115 (45.22%), Postives = 66/115 (57.39%), Query Frame = 3 Query: 54 GQATYLGNP--VPWGTLPTILVIEFLSIAFVEHQRSMEKDPEKKK----YPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 380 G YLGNP + + L ++ + + VE R + P + YPG AFDPLG + DP F E KVKEIKNGRLA+ A +GF V Q+ G GP+ENL HLA+P NN Sbjct: 150 GGLNYLGNPSLIHAQNIVATLAVQVVLMGLVEGYR-VNGGPAGEGLDPLYPGEAFDPLGLADDPDTFAELKVKEIKNGRLAMFACLGFFV-QAIVTGKGPIENLTDHLANPAENN 262
BLAST of CK739695 vs. ExPASy Swiss-Prot
Match: CB23_SOYBN (Chlorophyll a-b binding protein 3, chloroplastic OS=Glycine max GN=CAB3 PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 1.651e-16 Identity = 53/117 (45.30%), Postives = 67/117 (57.26%), Query Frame = 3 Query: 54 GQATYLGNP--VPWGTLPTILVIEFLSIAFVEHQR------SMEKDPEKKKYPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 380 G YLGNP + ++ I + + + VE R DP YPGG+FDPLG + DP+ F E KVKE+KNGRLA+ + GF V Q+ G GPLENLA HLA P +NN Sbjct: 139 GGLDYLGNPSLIHAQSILAIWATQVILMGAVEGYRIAGGPLGEVTDPI---YPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFV-QAIVTGKGPLENLADHLAGPVNNN 251
BLAST of CK739695 vs. ExPASy Swiss-Prot
Match: CB215_PEA (Chlorophyll a-b binding protein 215, chloroplastic OS=Pisum sativum GN=CAB215 PE=1 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 1.651e-16 Identity = 55/129 (42.64%), Postives = 69/129 (53.49%), Query Frame = 3 Query: 18 WVHAQEWAAVPGGQATYLGNP--VPWGTLPTILVIEFLSIAFVEHQR------SMEKDPEKKKYPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 380 W A GG YLGNP + ++ I + + + FVE R DP YPGGAFDPLG + DP F E KVKE+KNGRLA+ + GF V Q+ G GP++NL H+ADP NN Sbjct: 130 WFKAGSQIFAEGG-LDYLGNPNLIHAQSILAIWATQVVLMGFVEGYRVGGGPLGEGLDP---LYPGGAFDPLGLADDPDSFAELKVKELKNGRLAMFSMFGFFV-QAIVTGKGPIQNLYDHVADPVANN 253
BLAST of CK739695 vs. ExPASy Swiss-Prot
Match: CB2_PHYPA (Chlorophyll a-b binding protein, chloroplastic OS=Physcomitrella patens PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 2.816e-16 Identity = 55/117 (47.01%), Postives = 65/117 (55.56%), Query Frame = 3 Query: 54 GQATYLGNP--VPWGTLPTILVIEFLSIAFVEHQR------SMEKDPEKKKYPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 380 G YLGNP V ++ I + + + VE R DP YPGG+FDPLG + DP F E KVKEIKNGRLA+ + GF V Q+ G GPLENL HLADP NN Sbjct: 144 GGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVTDPI---YPGGSFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPLENLNDHLADPVANN 256
BLAST of CK739695 vs. ExPASy Swiss-Prot
Match: CB2A_PYRPY (Chlorophyll a-b binding protein 1A, chloroplastic OS=Pyrus pyrifolia PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 2.816e-16 Identity = 41/66 (62.12%), Postives = 48/66 (72.73%), Query Frame = 3 Query: 183 YPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 380 YPGG FDPLG + DP F + KVKEIKNGRLA+ + GF V Q+ G GP+ENLA HLADP +NN Sbjct: 202 YPGGNFDPLGLADDPDAFADVKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPIENLADHLADPVNNN 266
BLAST of CK739695 vs. ExPASy Swiss-Prot
Match: CB21_SOYBN (Chlorophyll a-b binding protein, chloroplastic (Fragment) OS=Glycine max PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 2.816e-16 Identity = 41/66 (62.12%), Postives = 49/66 (74.24%), Query Frame = 3 Query: 183 YPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 380 YPGG+FDPL + DP+ F E KVKEIKNGRLA+ + GF V Q+ G GPLENLA HLA+P +NN Sbjct: 169 YPGGSFDPLALADDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPLENLADHLAEPVNNN 233 The following BLAST results are available for this feature:
BLAST of CK739695 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 77
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Sequences
The
following sequences are available for this feature:
EST sequence >CK739695 ID=CK739695; Name=CK739695; organism=Citrus sinensis; type=EST; length=524bpback to top |