CK739695
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK739695 vs. ExPASy Swiss-Prot
Match: CB22_PINSY (Chlorophyll a-b binding protein type 2 member 2 (Fragment) OS=Pinus sylvestris PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 9.057e-15 Identity = 51/117 (43.59%), Postives = 64/117 (54.70%), Query Frame = 3 Query: 54 GQATYLGNP--VPWGTLPTILVIEFLSIAFVEHQR------SMEKDPEKKKYPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 380 G YLGNP + ++ I + + + +E R DP YPG AFDPLG + DP+ E KVKEIKNGRLA+ + GF V Q+ G GP+ENL HLADP NN Sbjct: 26 GGLDYLGNPNLIHAQSILAIWACQVVLMGLIEGYRVGGGPLGEGLDP---LYPGDAFDPLGLADDPEAKAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPIENLYDHLADPVANN 138
BLAST of CK739695 vs. ExPASy Swiss-Prot
Match: CB21_PINTH (Chlorophyll a-b binding protein type I, chloroplastic OS=Pinus thunbergii PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 9.057e-15 Identity = 40/65 (61.54%), Postives = 46/65 (70.77%), Query Frame = 3 Query: 186 PGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 380 PGGAFDPLG + DP+ E KVKEIKNGRLA+ + GF V Q+ G GP+ENL HLADP NN Sbjct: 191 PGGAFDPLGLADDPEACAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPIENLYDHLADPVANN 254
BLAST of CK739695 vs. ExPASy Swiss-Prot
Match: CB21_EUGGR (Chlorophyll a-b binding protein of LHCII type 1 (Fragment) OS=Euglena gracilis PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 7.668e-14 Identity = 45/102 (44.12%), Postives = 57/102 (55.88%), Query Frame = 3 Query: 93 TLPTILVIEFLSIAFVEHQRSMEKDPEK------KKYPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 380 +L IL + L + VE R+ P + + YPGG FDPLG + DP F E KVKEIKNGRLA+ +GF Q+ G GP+EN HL DP +N Sbjct: 10 SLLAILATQVLLMGAVEGYRAGNTAPGQFGEDLDRLYPGGPFDPLGLADDPDTFPELKVKEIKNGRLAMSGMLGF-YAQAIVTGEGPVENWLYHLQDPSAHN 110
BLAST of CK739695 vs. ExPASy Swiss-Prot
Match: CB2_CHLRE (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Chlamydomonas reinhardtii GN=cabII-1 PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.001e-13 Identity = 48/115 (41.74%), Postives = 63/115 (54.78%), Query Frame = 3 Query: 54 GQATYLGNP--VPWGTLPTILVIEFLSIAFVEHQRSMEKDPEKKK----YPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 380 G YLGNP V + ++ + + +E R + P + YPG +FDPLG + DP F E KVKEIKNGRLA + GF V Q+ G GP++NL HLA+P NN Sbjct: 129 GGLDYLGNPSLVHAQNIVATSAVQVILMGLIEGYR-VNGGPAGEGLDPLYPGESFDPLGLADDPDTFAELKVKEIKNGRLASFSMFGFFV-QAIVTGKGPVQNLDDHLANPTVNN 241
BLAST of CK739695 vs. ExPASy Swiss-Prot
Match: CB23_SOLLC (Chlorophyll a-b binding protein 13, chloroplastic OS=Solanum lycopersicum GN=CAB13 PE=1 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 2.231e-13 Identity = 51/115 (44.35%), Postives = 62/115 (53.91%), Query Frame = 3 Query: 54 GQATYLGNP--VPWGTLPTILVIEFLSIAFVEHQRSMEKD---PEKKKYPGGA-FDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 380 G YLGNP V ++ +L + + + VE R YPGG FDPLG + DP F E KVKEIKNGRLA+ + GF V Q+ G GPLENL HL +P NN Sbjct: 140 GGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLPGVGEGNDLYPGGQYFDPLGLADDPTTFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPLENLLDHLDNPVANN 253
BLAST of CK739695 vs. ExPASy Swiss-Prot
Match: CB12_SOLLC (Chlorophyll a-b binding protein 7, chloroplastic OS=Solanum lycopersicum GN=CAB7 PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 6.491e-13 Identity = 41/76 (53.95%), Postives = 49/76 (64.47%), Query Frame = 3 Query: 183 YPGGA-FDPLGF-SKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDVIIPR 404 YPGG FDPLG+ S P K +E + KEIKNGRLA+LA +G Q Y GTGP++NL HLADP H I P+ Sbjct: 196 YPGGLWFDPLGWGSGSPAKIKELRTKEIKNGRLAMLAVMGAWFQH-IYTGTGPIDNLFAHLADPGHATIFAAFSPK 270
BLAST of CK739695 vs. ExPASy Swiss-Prot
Match: CB12_PETHY (Chlorophyll a-b binding protein, chloroplastic OS=Petunia hybrida PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 6.491e-13 Identity = 41/76 (53.95%), Postives = 49/76 (64.47%), Query Frame = 3 Query: 183 YPGGA-FDPLGF-SKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDVIIPR 404 YPGG FDPLG+ S P K +E + KEIKNGRLA+LA +G Q Y GTGP++NL HLADP H I P+ Sbjct: 196 YPGGLWFDPLGWGSGSPAKIKELRTKEIKNGRLAMLAVMGAWFQH-IYTGTGPIDNLFAHLADPGHATIFAAFSPK 270 The following BLAST results are available for this feature:
BLAST of CK739695 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 77
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Sequences
The
following sequences are available for this feature:
EST sequence >CK739695 ID=CK739695; Name=CK739695; organism=Citrus sinensis; type=EST; length=524bpback to top |