CK739698

Overview
NameCK739698
Unique NameCK739698
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length255
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK739698 vs. ExPASy Swiss-Prot
Match: ADH3_SOLTU (Alcohol dehydrogenase 3 OS=Solanum tuberosum GN=ADH3 PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 6.219e-26
Identity = 48/81 (59.26%), Postives = 66/81 (81.48%), Query Frame = 2
Query:    5 AGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGV 247
            AGASR+IG+D++  +F++AK FGVTEFVNPKD+ KP+Q+V+ ++TDGGVD S EC G++  M +A EC H GWG +V+VGV
Sbjct:  218 AGASRIIGVDLNASRFEQAKKFGVTEFVNPKDYSKPVQEVIAEMTDGGVDRSVECTGHIDAMISAFECVHDGWGVAVLVGV 298          
BLAST of CK739698 vs. ExPASy Swiss-Prot
Match: ADH2_SOLTU (Alcohol dehydrogenase 2 OS=Solanum tuberosum GN=ADH2 PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 6.219e-26
Identity = 48/81 (59.26%), Postives = 66/81 (81.48%), Query Frame = 2
Query:    5 AGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGV 247
            AGASR+IG+D++  +F++AK FGVTEFVNPKD+ KP+Q+V+ ++TDGGVD S EC G++  M +A EC H GWG +V+VGV
Sbjct:  218 AGASRIIGVDLNASRFEQAKKFGVTEFVNPKDYSKPVQEVIAEMTDGGVDRSVECTGHIDAMISAFECVHDGWGVAVLVGV 298          
BLAST of CK739698 vs. ExPASy Swiss-Prot
Match: ADH2_SOLLC (Alcohol dehydrogenase 2 OS=Solanum lycopersicum GN=ADH2 PE=2 SV=2)

HSP 1 Score: 115.931 bits (289), Expect = 6.219e-26
Identity = 48/81 (59.26%), Postives = 66/81 (81.48%), Query Frame = 2
Query:    5 AGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGV 247
            AGASR+IG+D++  +F++AK FGVTEFVNPKD+ KP+Q+V+ ++TDGGVD S EC G++  M +A EC H GWG +V+VGV
Sbjct:  218 AGASRIIGVDLNASRFEQAKKFGVTEFVNPKDYSKPVQEVIAEMTDGGVDRSVECTGHIDAMISAFECVHDGWGVAVLVGV 298          
BLAST of CK739698 vs. ExPASy Swiss-Prot
Match: ADH1_SOLTU (Alcohol dehydrogenase 1 OS=Solanum tuberosum GN=ADH1 PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 6.219e-26
Identity = 48/81 (59.26%), Postives = 66/81 (81.48%), Query Frame = 2
Query:    5 AGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGV 247
            AGASR+IG+D++  +F++AK FGVTEFVNPKD+ KP+Q+V+ ++TDGGVD S EC G++  M +A EC H GWG +V+VGV
Sbjct:  218 AGASRIIGVDLNASRFEQAKKFGVTEFVNPKDYSKPVQEVIAEMTDGGVDRSVECTGHIDAMISAFECVHDGWGVAVLVGV 298          
BLAST of CK739698 vs. ExPASy Swiss-Prot
Match: ADH1_TRIRP (Alcohol dehydrogenase 1 OS=Trifolium repens GN=ADH1 PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 1.386e-25
Identity = 48/81 (59.26%), Postives = 64/81 (79.01%), Query Frame = 2
Query:    5 AGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGV 247
            +GASR+IG+D+   +F+ AK FGV EFVNPKDHDKP+QQV+ ++TDGGVD + EC G++  M +A EC H GWG +V+VGV
Sbjct:  218 SGASRIIGVDLVSSRFELAKKFGVNEFVNPKDHDKPVQQVIAEMTDGGVDRAVECTGSIQAMISAFECVHDGWGVAVLVGV 298          
BLAST of CK739698 vs. ExPASy Swiss-Prot
Match: FRMA_ECOUT (S-(hydroxymethyl)glutathione dehydrogenase OS=Escherichia coli (strain UTI89 / UPEC) GN=frmA PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 1.810e-25
Identity = 50/82 (60.98%), Postives = 66/82 (80.49%), Query Frame = 2
Query:    5 AGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVA 250
            A A R+I ID +PKKF+ A+ FG T+ +NP D+DKPI+ VL+D+   G+D++FECIGNV+VMRAALE  H+GWG SVI+GVA
Sbjct:  209 AKAGRIIAIDTNPKKFELARRFGATDCINPNDYDKPIKDVLLDINKWGIDHTFECIGNVNVMRAALESAHRGWGQSVIIGVA 290          
BLAST of CK739698 vs. ExPASy Swiss-Prot
Match: FRMA_ECOL6 (S-(hydroxymethyl)glutathione dehydrogenase OS=Escherichia coli O6 GN=frmA PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 1.810e-25
Identity = 50/82 (60.98%), Postives = 66/82 (80.49%), Query Frame = 2
Query:    5 AGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVA 250
            A A R+I ID +PKKF+ A+ FG T+ +NP D+DKPI+ VL+D+   G+D++FECIGNV+VMRAALE  H+GWG SVI+GVA
Sbjct:  209 AKAGRIIAIDTNPKKFELARRFGATDCINPNDYDKPIKDVLLDINKWGIDHTFECIGNVNVMRAALESAHRGWGQSVIIGVA 290          
BLAST of CK739698 vs. ExPASy Swiss-Prot
Match: FRMA_ECOL5 (S-(hydroxymethyl)glutathione dehydrogenase OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=frmA PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 1.810e-25
Identity = 50/82 (60.98%), Postives = 66/82 (80.49%), Query Frame = 2
Query:    5 AGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVA 250
            A A R+I ID +PKKF+ A+ FG T+ +NP D+DKPI+ VL+D+   G+D++FECIGNV+VMRAALE  H+GWG SVI+GVA
Sbjct:  209 AKAGRIIAIDTNPKKFELARRFGATDCINPNDYDKPIKDVLLDINKWGIDHTFECIGNVNVMRAALESAHRGWGQSVIIGVA 290          
BLAST of CK739698 vs. ExPASy Swiss-Prot
Match: FRMA_ECOK1 (S-(hydroxymethyl)glutathione dehydrogenase OS=Escherichia coli O1:K1 / APEC GN=frmA PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 1.810e-25
Identity = 50/82 (60.98%), Postives = 66/82 (80.49%), Query Frame = 2
Query:    5 AGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVA 250
            A A R+I ID +PKKF+ A+ FG T+ +NP D+DKPI+ VL+D+   G+D++FECIGNV+VMRAALE  H+GWG SVI+GVA
Sbjct:  209 AKAGRIIAIDTNPKKFELARRFGATDCINPNDYDKPIKDVLLDINKWGIDHTFECIGNVNVMRAALESAHRGWGQSVIIGVA 290          
BLAST of CK739698 vs. ExPASy Swiss-Prot
Match: ADH2_ORYSJ (Alcohol dehydrogenase 2 OS=Oryza sativa subsp. japonica GN=ADH2 PE=2 SV=2)

HSP 1 Score: 114.39 bits (285), Expect = 1.810e-25
Identity = 45/81 (55.56%), Postives = 66/81 (81.48%), Query Frame = 2
Query:    5 AGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGV 247
            +GASR+IG+D++P KF++AK FG T+FVNPKDH KP+ +VL+++T+GG+D + EC GN++ M +  EC H GWG +V+VGV
Sbjct:  217 SGASRIIGVDLNPAKFEQAKKFGCTDFVNPKDHSKPVHEVLIEMTNGGLDRAVECTGNINAMISCFECVHDGWGVAVLVGV 297          
The following BLAST results are available for this feature:
BLAST of CK739698 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 111
Match NameE-valueIdentityDescription
ADH3_SOLTU6.219e-2659.26Alcohol dehydrogenase 3 OS=Solanum tuberosum GN=AD... [more]
ADH2_SOLTU6.219e-2659.26Alcohol dehydrogenase 2 OS=Solanum tuberosum GN=AD... [more]
ADH2_SOLLC6.219e-2659.26Alcohol dehydrogenase 2 OS=Solanum lycopersicum GN... [more]
ADH1_SOLTU6.219e-2659.26Alcohol dehydrogenase 1 OS=Solanum tuberosum GN=AD... [more]
ADH1_TRIRP1.386e-2559.26Alcohol dehydrogenase 1 OS=Trifolium repens GN=ADH... [more]
FRMA_ECOUT1.810e-2560.98S-(hydroxymethyl)glutathione dehydrogenase OS=Esch... [more]
FRMA_ECOL61.810e-2560.98S-(hydroxymethyl)glutathione dehydrogenase OS=Esch... [more]
FRMA_ECOL51.810e-2560.98S-(hydroxymethyl)glutathione dehydrogenase OS=Esch... [more]
FRMA_ECOK11.810e-2560.98S-(hydroxymethyl)glutathione dehydrogenase OS=Esch... [more]
ADH2_ORYSJ1.810e-2555.56Alcohol dehydrogenase 2 OS=Oryza sativa subsp. jap... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_6085 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE58F04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK739698 ID=CK739698; Name=CK739698; organism=Citrus sinensis; type=EST; length=255bp
GGCAGCTGGAGCTTCACGTGTTATTGGTATAGATATTGACCCAAAAAAGT
TTGATAGAGCAAAGAATTTTGGAGTTACTGAATTTGTAAATCCCAAGGAC
CATGACAAACCCATTCAGCAGGTCCTTGTCGATCTCACGGATGGTGGTGT
TGACTATAGTTTTGAATGCATTGGCAATGTCTCTGTGATGAGGGCAGCTT
TGGAATGCTGTCACAAGGGCTGGGGAACATCAGTTATTGTGGGTGTTGCT
GCATC
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