CK739698

Overview
NameCK739698
Unique NameCK739698
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length255
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK739698 vs. ExPASy Swiss-Prot
Match: ADH1B_HUMAN (Alcohol dehydrogenase 1B OS=Homo sapiens GN=ADH1B PE=1 SV=2)

HSP 1 Score: 107.457 bits (267), Expect = 2.212e-23
Identity = 49/82 (59.76%), Postives = 64/82 (78.05%), Query Frame = 2
Query:    2 AAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGV 247
            AAGA+R+I +DI+  KF +AK  G TE +NP+D+ KPIQ+VL ++TDGGVD+SFE IG +  M A+L CCH+  GTSVIVGV
Sbjct:  214 AAGAARIIAVDINKDKFAKAKELGATECINPQDYKKPIQEVLKEMTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGV 295          
BLAST of CK739698 vs. ExPASy Swiss-Prot
Match: ADH1A_MACMU (Alcohol dehydrogenase 1A OS=Macaca mulatta GN=ADH1A PE=2 SV=2)

HSP 1 Score: 107.457 bits (267), Expect = 2.212e-23
Identity = 49/82 (59.76%), Postives = 64/82 (78.05%), Query Frame = 2
Query:    2 AAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGV 247
            AAGA+R+I +DI+  KF +AK  G TE +NP+D+ KPIQ+VL ++TDGGVD+SFE IG +  M A+L CCH+  GTSVIVGV
Sbjct:  214 AAGAARIIAVDINKDKFAKAKELGATECINPQDYKKPIQEVLKEMTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGV 295          
BLAST of CK739698 vs. ExPASy Swiss-Prot
Match: ADH1A_HUMAN (Alcohol dehydrogenase 1A OS=Homo sapiens GN=ADH1A PE=1 SV=2)

HSP 1 Score: 107.457 bits (267), Expect = 2.212e-23
Identity = 49/82 (59.76%), Postives = 64/82 (78.05%), Query Frame = 2
Query:    2 AAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGV 247
            AAGA+R+I +DI+  KF +AK  G TE +NP+D+ KPIQ+VL ++TDGGVD+SFE IG +  M A+L CCH+  GTSVIVGV
Sbjct:  214 AAGAARIIAVDINKDKFAKAKELGATECINPQDYKKPIQEVLKEMTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGV 295          
BLAST of CK739698 vs. ExPASy Swiss-Prot
Match: ADH2_HORVU (Alcohol dehydrogenase 2 OS=Hordeum vulgare GN=ADH2 PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 4.928e-23
Identity = 43/76 (56.58%), Postives = 60/76 (78.95%), Query Frame = 2
Query:    5 AGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTS 232
            +GASR+IG+D++P K ++AK FG T+FVNPKDH KP+Q+V+V++TDGGV+ + EC GN   M +A EC H GWG +
Sbjct:  217 SGASRIIGVDLNPAKHEQAKKFGCTDFVNPKDHTKPVQEVIVEMTDGGVNRAVECTGNADAMISAFECVHDGWGVA 292          
BLAST of CK739698 vs. ExPASy Swiss-Prot
Match: ADH1G_PAPHA (Alcohol dehydrogenase 1C OS=Papio hamadryas GN=ADH1C PE=2 SV=3)

HSP 1 Score: 105.916 bits (263), Expect = 6.436e-23
Identity = 48/82 (58.54%), Postives = 64/82 (78.05%), Query Frame = 2
Query:    2 AAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGV 247
            AAGA+R+I +DI+  KF +AK  G TE +NP+D+ KPIQ+VL ++TDGGVD+SFE IG +  + A+L CCH+  GTSVIVGV
Sbjct:  214 AAGAARIIAVDINKDKFAKAKELGATECINPQDYKKPIQEVLKEMTDGGVDFSFEVIGRLDTIMASLLCCHEACGTSVIVGV 295          
BLAST of CK739698 vs. ExPASy Swiss-Prot
Match: ADH1B_UROHA (Alcohol dehydrogenase 1B OS=Uromastyx hardwickii PE=1 SV=2)

HSP 1 Score: 105.916 bits (263), Expect = 6.436e-23
Identity = 53/83 (63.86%), Postives = 62/83 (74.70%), Query Frame = 2
Query:    2 AAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGV 247
            AAGASR+IGIDI+ +KF +AK  G TE VNP D+ KPI +VL D+TDG GV+YSFE IG    M AAL  CH  +GTSVIVGV
Sbjct:  213 AAGASRIIGIDINKEKFPKAKELGATECVNPLDYKKPINEVLFDMTDGEGVEYSFEVIGRTDTMTAALASCHNNYGTSVIVGV 295          
BLAST of CK739698 vs. ExPASy Swiss-Prot
Match: ADHL3_ARATH (Alcohol dehydrogenase-like 3 OS=Arabidopsis thaliana GN=At1g32780 PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 1.098e-22
Identity = 45/82 (54.88%), Postives = 62/82 (75.61%), Query Frame = 2
Query:    2 AAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGV 247
            A GASR+IG+D +  KF++ K  GVT+F+NPKD  KP+ Q++ ++T GGVDYSFEC GNV V+R A    H GWG++V+VG+
Sbjct:  227 ARGASRIIGVDANASKFEKGKLMGVTDFINPKDLTKPVHQMIREITGGGVDYSFECTGNVDVLREAFLSTHVGWGSTVLVGI 308          
BLAST of CK739698 vs. ExPASy Swiss-Prot
Match: ADH1S_HORSE (Alcohol dehydrogenase S chain OS=Equus caballus PE=1 SV=3)

HSP 1 Score: 105.145 bits (261), Expect = 1.098e-22
Identity = 48/82 (58.54%), Postives = 64/82 (78.05%), Query Frame = 2
Query:    2 AAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGV 247
            AAGA+R+IG+DI+  KF +AK  G TE VNP+D+ KPIQ+VL ++++GGVD+SFE IG +  M AAL CC + +G SVIVGV
Sbjct:  213 AAGAARIIGVDINKDKFAKAKEVGATECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVAALSCCQEAYGVSVIVGV 294          
BLAST of CK739698 vs. ExPASy Swiss-Prot
Match: ADH1_GEOKN (Alcohol dehydrogenase 1 OS=Geomys knoxjonesi GN=ADH1 PE=2 SV=3)

HSP 1 Score: 103.99 bits (258), Expect = 2.446e-22
Identity = 49/82 (59.76%), Postives = 62/82 (75.61%), Query Frame = 2
Query:    2 AAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGV 247
            AAGA+R+I +DI+  KF +AK  G TE VNP+D+DKPI QVL ++TDGGVD+SFE IG +  M +AL CC +  G SVIVGV
Sbjct:  214 AAGAARIIAVDINKDKFAKAKELGATECVNPQDYDKPIYQVLQEMTDGGVDFSFEVIGRLDTMVSALMCCQESHGVSVIVGV 295          
BLAST of CK739698 vs. ExPASy Swiss-Prot
Match: ADH1_GEOBU (Alcohol dehydrogenase 1 OS=Geomys bursarius GN=ADH1 PE=2 SV=3)

HSP 1 Score: 103.99 bits (258), Expect = 2.446e-22
Identity = 49/82 (59.76%), Postives = 62/82 (75.61%), Query Frame = 2
Query:    2 AAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGV 247
            AAGA+R+I +DI+  KF +AK  G TE VNP+D+DKPI QVL ++TDGGVD+SFE IG +  M +AL CC +  G SVIVGV
Sbjct:  214 AAGAARIIAVDINKDKFAKAKELGATECVNPQDYDKPIYQVLQEMTDGGVDFSFEVIGRLDTMVSALMCCQESHGVSVIVGV 295          
The following BLAST results are available for this feature:
BLAST of CK739698 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 111
Match NameE-valueIdentityDescription
ADH1B_HUMAN2.212e-2359.76Alcohol dehydrogenase 1B OS=Homo sapiens GN=ADH1B ... [more]
ADH1A_MACMU2.212e-2359.76Alcohol dehydrogenase 1A OS=Macaca mulatta GN=ADH1... [more]
ADH1A_HUMAN2.212e-2359.76Alcohol dehydrogenase 1A OS=Homo sapiens GN=ADH1A ... [more]
ADH2_HORVU4.928e-2356.58Alcohol dehydrogenase 2 OS=Hordeum vulgare GN=ADH2... [more]
ADH1G_PAPHA6.436e-2358.54Alcohol dehydrogenase 1C OS=Papio hamadryas GN=ADH... [more]
ADH1B_UROHA6.436e-2363.86Alcohol dehydrogenase 1B OS=Uromastyx hardwickii P... [more]
ADHL3_ARATH1.098e-2254.88Alcohol dehydrogenase-like 3 OS=Arabidopsis thalia... [more]
ADH1S_HORSE1.098e-2258.54Alcohol dehydrogenase S chain OS=Equus caballus PE... [more]
ADH1_GEOKN2.446e-2259.76Alcohol dehydrogenase 1 OS=Geomys knoxjonesi GN=AD... [more]
ADH1_GEOBU2.446e-2259.76Alcohol dehydrogenase 1 OS=Geomys bursarius GN=ADH... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_6085 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE58F04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK739698 ID=CK739698; Name=CK739698; organism=Citrus sinensis; type=EST; length=255bp
GGCAGCTGGAGCTTCACGTGTTATTGGTATAGATATTGACCCAAAAAAGT
TTGATAGAGCAAAGAATTTTGGAGTTACTGAATTTGTAAATCCCAAGGAC
CATGACAAACCCATTCAGCAGGTCCTTGTCGATCTCACGGATGGTGGTGT
TGACTATAGTTTTGAATGCATTGGCAATGTCTCTGTGATGAGGGCAGCTT
TGGAATGCTGTCACAAGGGCTGGGGAACATCAGTTATTGTGGGTGTTGCT
GCATC
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