CK739702
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK739702 vs. ExPASy Swiss-Prot
Match: RBS2_BRANA (Ribulose bisphosphate carboxylase small chain F1, chloroplastic OS=Brassica napus GN=RBCS F1 PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 3.895e-28 Identity = 52/68 (76.47%), Postives = 61/68 (89.71%), Query Frame = 1 Query: 1 EHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPP 204 EH S+PGYYDGRYWTMWKLP++GCTD+ QVLKEV E + EYP++F+RIIGFDN RQVQCISF+A KPP Sbjct: 109 EHGSTPGYYDGRYWTMWKLPLFGCTDSAQVLKEVQECKTEYPNAFIRIIGFDNNRQVQCISFIAYKPP 176
BLAST of CK739702 vs. ExPASy Swiss-Prot
Match: RBS1_BRANA (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Brassica napus GN=RBCS PE=2 SV=2) HSP 1 Score: 123.25 bits (308), Expect = 3.895e-28 Identity = 52/68 (76.47%), Postives = 61/68 (89.71%), Query Frame = 1 Query: 1 EHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPP 204 EH S+PGYYDGRYWTMWKLP++GCTD+ QVLKEV E + EYP++F+RIIGFDN RQVQCISF+A KPP Sbjct: 109 EHGSTPGYYDGRYWTMWKLPLFGCTDSAQVLKEVQECKTEYPNAFIRIIGFDNNRQVQCISFIAYKPP 176
BLAST of CK739702 vs. ExPASy Swiss-Prot
Match: RBS3B_SOLLC (Ribulose bisphosphate carboxylase small chain 3B, chloroplastic OS=Solanum lycopersicum GN=RBCS-3B PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 5.088e-28 Identity = 54/69 (78.26%), Postives = 60/69 (86.96%), Query Frame = 1 Query: 1 EHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPPG 207 E+H SPGYYDGRYWTMWKLPM+GCTDATQVL EV E +K YP ++VRIIGFDN RQVQCISF+A KP G Sbjct: 111 ENHKSPGYYDGRYWTMWKLPMFGCTDATQVLAEVQEAKKAYPQAWVRIIGFDNVRQVQCISFIAYKPEG 179
BLAST of CK739702 vs. ExPASy Swiss-Prot
Match: RBS3B_ARATH (Ribulose bisphosphate carboxylase small chain 3B, chloroplastic OS=Arabidopsis thaliana GN=RBCS-3B PE=1 SV=2) HSP 1 Score: 122.865 bits (307), Expect = 5.088e-28 Identity = 52/68 (76.47%), Postives = 61/68 (89.71%), Query Frame = 1 Query: 1 EHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPP 204 EH ++PGYYDGRYWTMWKLP++GCTD+ QVLKEV E +KEYP +F+RIIGFDN RQVQCISF+A KPP Sbjct: 109 EHGNTPGYYDGRYWTMWKLPLFGCTDSAQVLKEVEECKKEYPGAFIRIIGFDNTRQVQCISFIAYKPP 176
BLAST of CK739702 vs. ExPASy Swiss-Prot
Match: RBS3A_SOLLC (Ribulose bisphosphate carboxylase small chain 3A/3C, chloroplastic OS=Solanum lycopersicum GN=RBCS-3A/3C PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 5.088e-28 Identity = 54/69 (78.26%), Postives = 60/69 (86.96%), Query Frame = 1 Query: 1 EHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPPG 207 E+H SPGYYDGRYWTMWKLPM+GCTDATQVL EV E +K YP ++VRIIGFDN RQVQCISF+A KP G Sbjct: 111 ENHKSPGYYDGRYWTMWKLPMFGCTDATQVLAEVQEAKKAYPQAWVRIIGFDNVRQVQCISFIAYKPEG 179
BLAST of CK739702 vs. ExPASy Swiss-Prot
Match: RBS2B_ARATH (Ribulose bisphosphate carboxylase small chain 2B, chloroplastic OS=Arabidopsis thaliana GN=RBCS-2B PE=2 SV=2) HSP 1 Score: 122.865 bits (307), Expect = 5.088e-28 Identity = 52/68 (76.47%), Postives = 61/68 (89.71%), Query Frame = 1 Query: 1 EHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPP 204 EH ++PGYYDGRYWTMWKLP++GCTD+ QVLKEV E +KEYP +F+RIIGFDN RQVQCISF+A KPP Sbjct: 109 EHGNTPGYYDGRYWTMWKLPLFGCTDSAQVLKEVEECKKEYPGAFIRIIGFDNTRQVQCISFIAYKPP 176
BLAST of CK739702 vs. ExPASy Swiss-Prot
Match: RBS1B_ARATH (Ribulose bisphosphate carboxylase small chain 1B, chloroplastic OS=Arabidopsis thaliana GN=RBCS-1B PE=1 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 5.088e-28 Identity = 52/68 (76.47%), Postives = 61/68 (89.71%), Query Frame = 1 Query: 1 EHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPP 204 EH ++PGYYDGRYWTMWKLP++GCTD+ QVLKEV E +KEYP +F+RIIGFDN RQVQCISF+A KPP Sbjct: 109 EHGNTPGYYDGRYWTMWKLPLFGCTDSAQVLKEVEECKKEYPGAFIRIIGFDNTRQVQCISFIAYKPP 176
BLAST of CK739702 vs. ExPASy Swiss-Prot
Match: RBS6_LEMGI (Ribulose bisphosphate carboxylase small chain SSU5B, chloroplastic OS=Lemna gibba GN=SSU5B PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 6.644e-28 Identity = 53/67 (79.10%), Postives = 60/67 (89.55%), Query Frame = 1 Query: 1 EHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKP 201 E+H+SPGYYDGRYWTMWKLPM+GCTDA+QV+ EV E +K YP FVRIIGFDNKRQVQCISF+A KP Sbjct: 110 ENHASPGYYDGRYWTMWKLPMFGCTDASQVIAEVEEAKKAYPEYFVRIIGFDNKRQVQCISFIAYKP 176
BLAST of CK739702 vs. ExPASy Swiss-Prot
Match: RBS5_LEMGI (Ribulose bisphosphate carboxylase small chain SSU5A, chloroplastic OS=Lemna gibba GN=SSU5A PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 6.644e-28 Identity = 53/67 (79.10%), Postives = 60/67 (89.55%), Query Frame = 1 Query: 1 EHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKP 201 E+H+SPGYYDGRYWTMWKLPM+GCTDA+QV+ EV E +K YP FVRIIGFDNKRQVQCISF+A KP Sbjct: 110 ENHASPGYYDGRYWTMWKLPMFGCTDASQVIAEVEEAKKAYPEYFVRIIGFDNKRQVQCISFIAYKP 176
BLAST of CK739702 vs. ExPASy Swiss-Prot
Match: RBS4_LEMGI (Ribulose bisphosphate carboxylase small chain SSU40B, chloroplastic OS=Lemna gibba GN=SSU40B PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 6.644e-28 Identity = 53/67 (79.10%), Postives = 60/67 (89.55%), Query Frame = 1 Query: 1 EHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKP 201 E+H+SPGYYDGRYWTMWKLPM+GCTDA+QV+ EV E +K YP FVRIIGFDNKRQVQCISF+A KP Sbjct: 110 ENHASPGYYDGRYWTMWKLPMFGCTDASQVIAEVEEAKKAYPEYFVRIIGFDNKRQVQCISFIAYKP 176 The following BLAST results are available for this feature:
BLAST of CK739702 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 112
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Sequences
The
following sequences are available for this feature:
EST sequence >CK739702 ID=CK739702; Name=CK739702; organism=Citrus sinensis; type=EST; length=374bpback to top |