CK739702
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK739702 vs. ExPASy Swiss-Prot
Match: RBS0_SOLTU (Ribulose bisphosphate carboxylase small chain C, chloroplastic OS=Solanum tuberosum GN=RBCS-C PE=2 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 2.525e-27 Identity = 52/69 (75.36%), Postives = 59/69 (85.51%), Query Frame = 1 Query: 1 EHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPPG 207 EH+SSPGYYDGRYWTMWKLPM+GCTD TQVL EV E + YP +++RIIGFDN RQVQCISF+A KP G Sbjct: 112 EHNSSPGYYDGRYWTMWKLPMFGCTDGTQVLAEVQEAKNAYPQAWIRIIGFDNVRQVQCISFIAYKPEG 180
BLAST of CK739702 vs. ExPASy Swiss-Prot
Match: RBS_ZANAE (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Zantedeschia aethiopica GN=RBCS PE=2 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 3.298e-27 Identity = 53/69 (76.81%), Postives = 58/69 (84.06%), Query Frame = 1 Query: 1 EHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPPG 207 E+H+SPGYYDGRYWTMWKLPM+GCTD++QVLKEV E K YP F RIIGFDN RQVQCISFL KP G Sbjct: 109 EYHNSPGYYDGRYWTMWKLPMFGCTDSSQVLKEVDECSKAYPDYFNRIIGFDNTRQVQCISFLTYKPEG 177
BLAST of CK739702 vs. ExPASy Swiss-Prot
Match: RBS_FLATR (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Flaveria trinervia GN=RBCS PE=2 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 3.298e-27 Identity = 50/69 (72.46%), Postives = 62/69 (89.86%), Query Frame = 1 Query: 1 EHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPPG 207 E+ SSPGYYDGRYWTMWKLPM+GCTD+ QV+KE+ E +KEYP +++RIIGFDN RQVQC+SF+A+KP G Sbjct: 104 ENASSPGYYDGRYWTMWKLPMFGCTDSAQVMKELQECKKEYPQAWIRIIGFDNVRQVQCVSFIASKPTG 172
BLAST of CK739702 vs. ExPASy Swiss-Prot
Match: RBS2A_SOLLC (Ribulose bisphosphate carboxylase small chain 2A, chloroplastic OS=Solanum lycopersicum GN=RBCS-2A PE=2 SV=2) HSP 1 Score: 120.168 bits (300), Expect = 3.298e-27 Identity = 53/69 (76.81%), Postives = 60/69 (86.96%), Query Frame = 1 Query: 1 EHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPPG 207 E++ SPGYYDGRYWTMWKLPM+GCTDATQVL EV E +K YP ++VRIIGFDN RQVQCISF+A KP G Sbjct: 111 ENNKSPGYYDGRYWTMWKLPMFGCTDATQVLAEVQEAKKAYPQAWVRIIGFDNVRQVQCISFIAYKPEG 179
BLAST of CK739702 vs. ExPASy Swiss-Prot
Match: RBS_TOBAC (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Nicotiana tabacum GN=RBCS PE=1 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 4.307e-27 Identity = 52/69 (75.36%), Postives = 60/69 (86.96%), Query Frame = 1 Query: 1 EHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPPG 207 E++ SPGYYDGRYWTMWKLPM+GCTDATQVL EV E +K YP +++RIIGFDN RQVQCISF+A KP G Sbjct: 111 ENNKSPGYYDGRYWTMWKLPMFGCTDATQVLAEVEEAKKAYPQAWIRIIGFDNVRQVQCISFIAYKPEG 179
BLAST of CK739702 vs. ExPASy Swiss-Prot
Match: RBSC_SOLTU (Ribulose bisphosphate carboxylase small chain 2C, chloroplastic OS=Solanum tuberosum GN=RBCS-2C PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 4.307e-27 Identity = 52/69 (75.36%), Postives = 60/69 (86.96%), Query Frame = 1 Query: 1 EHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPPG 207 E++ SPGYYDGRYWTMWKLPM+GCTDATQVL EV E +K YP +++RIIGFDN RQVQCISF+A KP G Sbjct: 111 ENNKSPGYYDGRYWTMWKLPMFGCTDATQVLAEVEEAKKAYPQAWIRIIGFDNVRQVQCISFIAYKPEG 179
BLAST of CK739702 vs. ExPASy Swiss-Prot
Match: RBSB_SOLTU (Ribulose bisphosphate carboxylase small chain 2B, chloroplastic OS=Solanum tuberosum GN=RBCS-2B PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 4.307e-27 Identity = 52/69 (75.36%), Postives = 60/69 (86.96%), Query Frame = 1 Query: 1 EHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPPG 207 E++ SPGYYDGRYWTMWKLPM+GCTDATQVL EV E +K YP +++RIIGFDN RQVQCISF+A KP G Sbjct: 111 ENNKSPGYYDGRYWTMWKLPMFGCTDATQVLAEVEEAKKAYPQAWIRIIGFDNVRQVQCISFIAYKPEG 179
BLAST of CK739702 vs. ExPASy Swiss-Prot
Match: RBSA_SOLTU (Ribulose bisphosphate carboxylase small chain 2A, chloroplastic OS=Solanum tuberosum GN=RBCS-2A PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 4.307e-27 Identity = 52/69 (75.36%), Postives = 60/69 (86.96%), Query Frame = 1 Query: 1 EHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPPG 207 E++ SPGYYDGRYWTMWKLPM+GCTDATQVL EV E +K YP +++RIIGFDN RQVQCISF+A KP G Sbjct: 111 ENNKSPGYYDGRYWTMWKLPMFGCTDATQVLAEVEEAKKAYPQAWIRIIGFDNVRQVQCISFIAYKPEG 179
BLAST of CK739702 vs. ExPASy Swiss-Prot
Match: RBS2_NICSY (Ribulose bisphosphate carboxylase small chain S41, chloroplastic OS=Nicotiana sylvestris PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 4.307e-27 Identity = 52/69 (75.36%), Postives = 60/69 (86.96%), Query Frame = 1 Query: 1 EHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPPG 207 E++ SPGYYDGRYWTMWKLPM+GCTDATQVL EV E +K YP +++RIIGFDN RQVQCISF+A KP G Sbjct: 112 ENNKSPGYYDGRYWTMWKLPMFGCTDATQVLAEVEEAKKAYPQAWIRIIGFDNVRQVQCISFIAYKPEG 180
BLAST of CK739702 vs. ExPASy Swiss-Prot
Match: RBS1_NICSY (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Nicotiana sylvestris GN=RBCS PE=2 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 4.307e-27 Identity = 52/69 (75.36%), Postives = 60/69 (86.96%), Query Frame = 1 Query: 1 EHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPPG 207 E++ SPGYYDGRYWTMWKLPM+GCTDATQVL EV E +K YP +++RIIGFDN RQVQCISF+A KP G Sbjct: 111 ENNKSPGYYDGRYWTMWKLPMFGCTDATQVLAEVEEAKKAYPQAWIRIIGFDNVRQVQCISFIAYKPEG 179 The following BLAST results are available for this feature:
BLAST of CK739702 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 112
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Sequences
The
following sequences are available for this feature:
EST sequence >CK739702 ID=CK739702; Name=CK739702; organism=Citrus sinensis; type=EST; length=374bpback to top |