CK739702
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK739702 vs. ExPASy Swiss-Prot
Match: RBS_MARPA (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Marchantia paleacea GN=RBCS PE=2 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 3.305e-19 Identity = 40/68 (58.82%), Postives = 51/68 (75.00%), Query Frame = 1 Query: 1 EHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEY-PHSFVRIIGFDNKRQVQCISFLAAKP 201 E + PGYYDGRYWTMWKLPM+GCTD+ VL+E+ E +K Y ++R +GFDN RQVQC SF+ +P Sbjct: 111 EGSTMPGYYDGRYWTMWKLPMFGCTDSASVLREIEECKKLYGKKCYIRCLGFDNTRQVQCASFIVHQP 178
BLAST of CK739702 vs. ExPASy Swiss-Prot
Match: RBS_SACHY (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Saccharum hybrid GN=RBCS PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 1.640e-18 Identity = 42/69 (60.87%), Postives = 51/69 (73.91%), Query Frame = 1 Query: 1 EHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPPG 207 E+ +SP YYDGRYWTMWKLPM+GCTDA+QV KE+ E YP I+GFDN RQ Q ++F+A KP G Sbjct: 99 ENSTSPCYYDGRYWTMWKLPMFGCTDASQVYKELQEAIASYP-ELRAILGFDNIRQTQWLTFIAYKPAG 166
BLAST of CK739702 vs. ExPASy Swiss-Prot
Match: RBS2_CHLRE (Ribulose bisphosphate carboxylase small chain 2, chloroplastic OS=Chlamydomonas reinhardtii GN=RBCS-2 PE=1 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 2.005e-16 Identity = 33/60 (55.00%), Postives = 45/60 (75.00%), Query Frame = 1 Query: 22 YYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKP 201 YYD RYWTMWKLPM+GC D QVL+E+ K +P ++VR++ FDN++QVQ + FL +P Sbjct: 112 YYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQVQIMGFLVQRP 171
BLAST of CK739702 vs. ExPASy Swiss-Prot
Match: RBS1_CHLRE (Ribulose bisphosphate carboxylase small chain 1, chloroplastic OS=Chlamydomonas reinhardtii GN=RBCS-1 PE=1 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 2.005e-16 Identity = 33/60 (55.00%), Postives = 45/60 (75.00%), Query Frame = 1 Query: 22 YYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKP 201 YYD RYWTMWKLPM+GC D QVL+E+ K +P ++VR++ FDN++QVQ + FL +P Sbjct: 112 YYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQVQIMGFLVQRP 171
BLAST of CK739702 vs. ExPASy Swiss-Prot
Match: RBS3_ACEAT (Ribulose bisphosphate carboxylase small chain 3, chloroplastic OS=Acetabularia acetabulum GN=RBCS-3 PE=2 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 4.467e-16 Identity = 34/61 (55.74%), Postives = 44/61 (72.13%), Query Frame = 1 Query: 22 YYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPP 204 Y D RYWTMWKLPM+GCTDA+QVL E+ K +P +++R++ FD RQVQ FL +PP Sbjct: 109 YQDNRYWTMWKLPMFGCTDASQVLSEIQACTKAFPDAYIRLVCFDANRQVQISGFLVHRPP 169
BLAST of CK739702 vs. ExPASy Swiss-Prot
Match: RBS3_ACECL (Ribulose bisphosphate carboxylase small chain 3, chloroplastic OS=Acetabularia cliftonii GN=RBCS-3 PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 9.952e-16 Identity = 34/64 (53.12%), Postives = 44/64 (68.75%), Query Frame = 1 Query: 13 SPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPP 204 S Y D RYWTMWKLPM+GCTD +QVL E+ K +P +++R++ FD RQVQ FL +PP Sbjct: 107 SSTYQDNRYWTMWKLPMFGCTDGSQVLSEIQACTKAFPDAYIRLVCFDANRQVQISGFLVHRPP 170
BLAST of CK739702 vs. ExPASy Swiss-Prot
Match: RBS2_ACECL (Ribulose bisphosphate carboxylase small chain 2 (Fragment) OS=Acetabularia cliftonii GN=RBCS-2 PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 9.952e-16 Identity = 34/64 (53.12%), Postives = 44/64 (68.75%), Query Frame = 1 Query: 13 SPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPP 204 S Y D RYWTMWKLPM+GCTD +QVL E+ K +P +++R++ FD RQVQ FL +PP Sbjct: 10 SSTYQDNRYWTMWKLPMFGCTDGSQVLSEIQACTKAFPDAYIRLVCFDANRQVQISGFLVHRPP 73
BLAST of CK739702 vs. ExPASy Swiss-Prot
Match: RBS5_ACECL (Ribulose bisphosphate carboxylase small chain 5, chloroplastic OS=Acetabularia cliftonii GN=RBCS-5 PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 1.300e-15 Identity = 33/61 (54.10%), Postives = 43/61 (70.49%), Query Frame = 1 Query: 22 YYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPP 204 Y D RYWTMWKLPM+GCTD +QVL E+ K +P +++R++ FD RQVQ FL +PP Sbjct: 111 YQDNRYWTMWKLPMFGCTDGSQVLSEIQACTKAFPDAYIRLVCFDANRQVQISGFLVHRPP 171
BLAST of CK739702 vs. ExPASy Swiss-Prot
Match: RBS4_ACECL (Ribulose bisphosphate carboxylase small chain 4, chloroplastic OS=Acetabularia cliftonii GN=RBCS-4 PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 1.300e-15 Identity = 33/61 (54.10%), Postives = 43/61 (70.49%), Query Frame = 1 Query: 22 YYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPP 204 Y D RYWTMWKLPM+GCTD +QVL E+ K +P +++R++ FD RQVQ FL +PP Sbjct: 109 YQDNRYWTMWKLPMFGCTDGSQVLSEIQACTKAFPDAYIRLVCFDANRQVQISGFLVHRPP 169
BLAST of CK739702 vs. ExPASy Swiss-Prot
Match: RBS2_ACEAT (Ribulose bisphosphate carboxylase small chain 2, chloroplastic (Fragment) OS=Acetabularia acetabulum GN=RBCS-2 PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 1.300e-15 Identity = 33/61 (54.10%), Postives = 43/61 (70.49%), Query Frame = 1 Query: 22 YYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPP 204 Y D RYWTMWKLPM+GCTD +QVL E+ K +P +++R++ FD RQVQ FL +PP Sbjct: 100 YQDNRYWTMWKLPMFGCTDGSQVLSEIQACTKAFPDAYIRLVCFDANRQVQISGFLVHRPP 160 The following BLAST results are available for this feature:
BLAST of CK739702 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 112
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CK739702 ID=CK739702; Name=CK739702; organism=Citrus sinensis; type=EST; length=374bpback to top |