CK739706
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK739706 vs. ExPASy Swiss-Prot
Match: FER_SYNEN (Ferredoxin-1 OS=Synechococcus elongatus naegeli GN=petF1 PE=3 SV=2) HSP 1 Score: 105.145 bits (261), Expect = 9.351e-23 Identity = 49/93 (52.69%), Postives = 66/93 (70.97%), Query Frame = 2 Query: 92 KSSSLHPEG-EQEIECPDDTYILDAAEDAGIDLPYSCRAGSCSTCAGKXXXXXXXXXXXXFLEDDQIDAGYVLTCVAYPTSDVTVETHKDEEM 367 K + + P+G E I+ P+D YILD AE+ G+DLP+SCRAG+CSTCAGK FL+DDQI+ G+VLTCVAYP SD + T+++EE+ Sbjct: 5 KVTLVRPDGSETTIDVPEDEYILDVAEEQGLDLPFSCRAGACSTCAGKLLEGEVDQSDQSFLDDDQIEKGFVLTCVAYPRSDCKILTNQEEEL 97 HSP 2 Score: 22.3274 bits (46), Expect = 9.351e-23 Identity = 9/13 (69.23%), Postives = 10/13 (76.92%), Query Frame = 1 Query: 79 MATYKVKLITPRG 117 MATYKV L+ P G Sbjct: 1 MATYKVTLVRPDG 13
BLAST of CK739706 vs. ExPASy Swiss-Prot
Match: FER_RHOPL (Ferredoxin OS=Rhodymenia palmata PE=1 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 9.712e-23 Identity = 48/86 (55.81%), Postives = 63/86 (73.26%), Query Frame = 2 Query: 110 PEGEQEIECPDDTYILDAAEDAGIDLPYSCRAGSCSTCAGKXXXXXXXXXXXXFLEDDQIDAGYVLTCVAYPTSDVTVETHKDEEM 367 P G +EIE + TY+LD+AED GIDLPYSCRAG+CSTCAG FL+DDQ++ +VLTCVAYPTSD ++TH++E++ Sbjct: 11 PGGVEEIEGDETTYVLDSAEDQGIDLPYSCRAGACSTCAGIVELGTVDQSDQSFLDDDQLNDSFVLTCVAYPTSDCQIKTHQEEKL 96
BLAST of CK739706 vs. ExPASy Swiss-Prot
Match: FER_PORPU (Ferredoxin OS=Porphyra purpurea GN=petF PE=3 SV=2) HSP 1 Score: 106.686 bits (265), Expect = 9.712e-23 Identity = 47/79 (59.49%), Postives = 60/79 (75.95%), Query Frame = 2 Query: 131 ECPDDTYILDAAEDAGIDLPYSCRAGSCSTCAGKXXXXXXXXXXXXFLEDDQIDAGYVLTCVAYPTSDVTVETHKDEEM 367 +C +DTYILDAAE+AGI+LPYSCRAG+CSTCAGK FL+D+Q+ GYVLTC+AYP SD T+ TH ++E+ Sbjct: 20 DCSEDTYILDAAEEAGIELPYSCRAGACSTCAGKVTEGSVDQSDQSFLDDEQLLKGYVLTCIAYPESDCTILTHVEQEL 98
BLAST of CK739706 vs. ExPASy Swiss-Prot
Match: FER_ODOSI (Ferredoxin OS=Odontella sinensis GN=petF PE=3 SV=2) HSP 1 Score: 106.301 bits (264), Expect = 1.268e-22 Identity = 46/80 (57.50%), Postives = 60/80 (75.00%), Query Frame = 2 Query: 128 IECPDDTYILDAAEDAGIDLPYSCRAGSCSTCAGKXXXXXXXXXXXXFLEDDQIDAGYVLTCVAYPTSDVTVETHKDEEM 367 I+C DD ++LDAAE+ GI+LPYSCRAG+CSTCAGK FL+DDQ+ AG+VLTC+AYP SD TV H+++E+ Sbjct: 19 IDCNDDVFLLDAAEEQGIELPYSCRAGACSTCAGKVTEGDIDQSEQTFLDDDQVGAGFVLTCIAYPKSDCTVLVHQEDEL 98
BLAST of CK739706 vs. ExPASy Swiss-Prot
Match: FER_PHYPA (Ferredoxin, chloroplastic OS=Physcomitrella patens GN=PETF PE=2 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 1.995e-22 Identity = 47/83 (56.63%), Postives = 56/83 (67.47%), Query Frame = 2 Query: 119 EQEIECPDDTYILDAAEDAGIDLPYSCRAGSCSTCAGKXXXXXXXXXXXXFLEDDQIDAGYVLTCVAYPTSDVTVETHKDEEM 367 E EC D+ Y LDAAE AG+DLPYSCRAG+CS+CAG FL+D QID G+VLTCVAYP SD + TH++E M Sbjct: 63 ENVXECSDEEYXLDAAERAGMDLPYSCRAGACSSCAGIIKAGEVDQSDQSFLDDSQIDDGFVLTCVAYPASDCIIXTHQEENM 145 HSP 2 Score: 25.0238 bits (53), Expect = 1.995e-22 Identity = 14/32 (43.75%), Postives = 18/32 (56.25%), Query Frame = 1 Query: 34 FGLKANNNRGGRVIAMATYKVKLITPRGRARN 129 FGLK+ + GR+ MATYKV + A N Sbjct: 35 FGLKSRSM--GRLTCMATYKVTFLDGETGAEN 64
BLAST of CK739706 vs. ExPASy Swiss-Prot
Match: FER_PORUM (Ferredoxin OS=Porphyra umbilicalis GN=PETF PE=1 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 4.820e-22 Identity = 46/79 (58.23%), Postives = 59/79 (74.68%), Query Frame = 2 Query: 131 ECPDDTYILDAAEDAGIDLPYSCRAGSCSTCAGKXXXXXXXXXXXXFLEDDQIDAGYVLTCVAYPTSDVTVETHKDEEM 367 +C +DTYILDAAE+ GI+LPYSCRAG+CSTCAGK FL+D+Q+ GYVLTC+AYP SD T+ TH ++E+ Sbjct: 19 DCSEDTYILDAAEEEGIELPYSCRAGACSTCAGKVTEGTVDQSDQSFLDDEQMLKGYVLTCIAYPESDCTILTHVEQEL 97
BLAST of CK739706 vs. ExPASy Swiss-Prot
Match: FER4_ARATH (Probable ferredoxin-4, chloroplastic OS=Arabidopsis thaliana GN=FD4 PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 7.431e-22 Identity = 45/93 (48.39%), Postives = 60/93 (64.52%), Query Frame = 2 Query: 92 KSSSLHPEGE-QEIECPDDTYILDAAEDAGIDLPYSCRAGSCSTCAGKXXXXXXXXXXXXFLEDDQIDAGYVLTCVAYPTSDVTVETHKDEEM 367 K + PEGE QEIE +D IL++AE+AG++LPYSCR+G+C TC GK FLE++QI GY+LTC+A P D V THK ++ Sbjct: 55 KVKLISPEGEEQEIEGNEDCCILESAENAGLELPYSCRSGTCGTCCGKLVSGKVDQSLGSFLEEEQIQKGYILTCIALPLEDCVVYTHKQSDL 147 HSP 2 Score: 29.261 bits (64), Expect = 7.431e-22 Identity = 13/28 (46.43%), Postives = 18/28 (64.29%), Query Frame = 1 Query: 34 FGLKANNNRGGRVIAMATYKVKLITPRG 117 FGL ++ G+V A + KVKLI+P G Sbjct: 36 FGLSSSRGNFGKVFAKESRKVKLISPEG 63
BLAST of CK739706 vs. ExPASy Swiss-Prot
Match: FER2_NOSMU (Ferredoxin-2 OS=Nostoc muscorum PE=1 SV=2) HSP 1 Score: 103.605 bits (257), Expect = 8.222e-22 Identity = 47/84 (55.95%), Postives = 62/84 (73.81%), Query Frame = 2 Query: 119 EQEIECPDDTYILDAAEDAGIDLPYSCRAGSCSTCAGKXXXXXXXXXXXXFLEDDQIDAGYVLTCVAYPTSDVTVETHKDEEMS 370 ++ IE PDD YILDAAE+AG+DLP+SCR+GSCS+C G FL+DDQI AG VLTCVAYPTS+ +ETH+++ ++ Sbjct: 16 DETIEVPDDEYILDAAEEAGLDLPFSCRSGSCSSCNGILKKGTVDQSDQNFLDDDQIAAGNVLTCVAYPTSNCEIETHREDAIA 99
BLAST of CK739706 vs. ExPASy Swiss-Prot
Match: FER1_EQUTE (Ferredoxin-1 OS=Equisetum telmateia PE=1 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 1.832e-21 Identity = 45/86 (52.33%), Postives = 61/86 (70.93%), Query Frame = 2 Query: 110 PEGEQEIECPDDTYILDAAEDAGIDLPYSCRAGSCSTCAGKXXXXXXXXXXXXFLEDDQIDAGYVLTCVAYPTSDVTVETHKDEEM 367 P GE ++ P+ T ILDAAE+AG DLP+SCRAG+CS+C GK FL+D Q++ G+VLTC+A P SD+ +ETHK+EE+ Sbjct: 9 PSGEFTLDVPEGTTILDAAEEAGYDLPFSCRAGACSSCLGKVVSGSVDQSEGSFLDDGQMEEGFVLTCIAIPESDLVIETHKEEEL 94
BLAST of CK739706 vs. ExPASy Swiss-Prot
Match: FER1_EQUAR (Ferredoxin-1 OS=Equisetum arvense PE=1 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 1.832e-21 Identity = 45/86 (52.33%), Postives = 61/86 (70.93%), Query Frame = 2 Query: 110 PEGEQEIECPDDTYILDAAEDAGIDLPYSCRAGSCSTCAGKXXXXXXXXXXXXFLEDDQIDAGYVLTCVAYPTSDVTVETHKDEEM 367 P GE ++ P+ T ILDAAE+AG DLP+SCRAG+CS+C GK FL+D Q++ G+VLTC+A P SD+ +ETHK+EE+ Sbjct: 9 PSGEFTLDVPEGTTILDAAEEAGYDLPFSCRAGACSSCLGKVVSGSVDESEGSFLDDGQMEEGFVLTCIAIPESDLVIETHKEEEL 94 The following BLAST results are available for this feature:
BLAST of CK739706 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 109
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Sequences
The
following sequences are available for this feature:
EST sequence >CK739706 ID=CK739706; Name=CK739706; organism=Citrus sinensis; type=EST; length=612bpback to top |